Wall clock time and date at job start Sun Mar 7 2021 04:37:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35894 * 116.99823 * 2 1 4 4 C 1.38619 * 120.02869 * 179.97438 * 3 2 1 5 5 C 1.38650 * 119.89277 * 180.02562 * 4 3 2 6 6 O 1.35895 * 120.02959 * 179.97438 * 5 4 3 7 7 C 1.42903 * 116.99888 * 359.97438 * 6 5 4 8 8 C 1.50698 * 109.47104 * 179.97438 * 7 6 5 9 9 O 1.21282 * 120.00304 * 0.02562 * 8 7 6 10 10 N 1.34776 * 119.99780 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99906 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.84863 * 336.20030 * 11 10 8 13 13 C 1.53786 * 113.68966 * 107.46584 * 11 10 8 14 14 C 1.53785 * 87.08063 * 89.12699 * 13 11 10 15 15 H 1.08995 * 113.68833 * 270.87150 * 14 13 11 16 16 C 1.52998 * 113.61399 * 139.98129 * 14 13 11 17 17 N 1.46504 * 109.47338 * 87.50134 * 16 14 13 18 18 C 1.34939 * 126.03518 * 124.99720 * 17 16 14 19 19 C 1.35315 * 107.74580 * 180.02562 * 18 17 16 20 20 C 1.39870 * 107.92072 * 0.02562 * 19 18 17 21 21 N 1.30839 * 108.20307 * 359.97438 * 20 19 18 22 22 C 1.53782 * 87.08102 * 25.43376 * 14 13 11 23 23 C 1.38762 * 119.94407 * 0.25132 * 5 4 3 24 24 C 1.50702 * 119.96761 * 179.74660 * 23 5 4 25 25 O 1.42901 * 109.47049 * 75.00829 * 24 23 5 26 26 Si 1.86298 * 109.46589 * 194.99980 * 24 23 5 27 27 C 1.38193 * 120.05410 * 359.49433 * 23 5 4 28 28 C 1.38158 * 120.10659 * 0.50883 * 27 23 5 29 29 H 1.09008 * 109.47105 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47506 * 299.99474 * 1 2 3 31 31 H 1.09002 * 109.47508 * 59.99919 * 1 2 3 32 32 H 1.08000 * 120.04884 * 0.02562 * 4 3 2 33 33 H 1.09001 * 109.46758 * 59.99796 * 7 6 5 34 34 H 1.08997 * 109.46967 * 300.00188 * 7 6 5 35 35 H 0.96998 * 120.00172 * 0.02562 * 10 8 7 36 36 H 1.08996 * 113.61590 * 334.57987 * 13 11 10 37 37 H 1.08995 * 113.61371 * 203.67442 * 13 11 10 38 38 H 1.09005 * 109.46930 * 327.50413 * 16 14 13 39 39 H 1.09003 * 109.47237 * 207.50432 * 16 14 13 40 40 H 1.07999 * 126.13213 * 0.02562 * 18 17 16 41 41 H 1.07999 * 126.04347 * 179.73376 * 19 18 17 42 42 H 1.08001 * 125.90246 * 179.97438 * 20 19 18 43 43 H 1.09001 * 113.61407 * 89.11246 * 22 14 13 44 44 H 1.09003 * 113.61477 * 220.01761 * 22 14 13 45 45 H 1.08994 * 109.47183 * 315.00080 * 24 23 5 46 46 H 0.96697 * 114.00213 * 59.98900 * 25 24 23 47 47 H 1.48507 * 110.00024 * 58.68715 * 26 24 23 48 48 H 1.48499 * 110.00064 * 180.02562 * 26 24 23 49 49 H 1.07999 * 119.94466 * 180.25328 * 27 23 5 50 50 H 1.08000 * 119.96791 * 179.72288 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0566 2.5210 0.0011 6 8 5.4135 2.5961 0.0021 7 6 6.1316 1.3606 0.0032 8 6 7.6124 1.6403 0.0036 9 8 8.0134 2.7849 0.0035 10 7 8.4911 0.6184 0.0052 11 6 9.9307 0.8902 0.0050 12 1 10.1761 1.8713 -0.4016 13 6 10.6161 0.5914 1.3489 14 6 10.8325 -0.8402 0.8305 15 1 10.0089 -1.5172 1.0571 16 6 12.1990 -1.4240 1.1951 17 7 12.1217 -2.0631 2.5111 18 6 12.4579 -3.3387 2.7950 19 6 12.2424 -3.5377 4.1160 20 6 11.7573 -2.3429 4.6578 21 7 11.6847 -1.4581 3.6966 22 6 10.7731 -0.2511 -0.5888 23 6 3.2969 3.6822 0.0063 24 6 3.9773 5.0269 0.0127 25 8 4.5036 5.3006 -1.2874 26 14 2.7437 6.3447 0.4732 27 6 1.9171 3.6066 0.0005 28 6 1.2905 2.3752 0.0000 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5137 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 4.0196 0.3792 0.0005 33 1 5.8706 0.7879 -0.8868 34 1 5.8692 0.7887 0.8932 35 1 8.1705 -0.2971 0.0056 36 1 9.9433 0.6488 2.2045 37 1 11.5423 1.1459 1.4995 38 1 12.9399 -0.6249 1.2222 39 1 12.4891 -2.1633 0.4485 40 1 12.8320 -4.0699 2.0937 41 1 12.4104 -4.4580 4.6557 42 1 11.4890 -2.1789 5.6910 43 1 11.7423 0.0732 -0.9679 44 1 10.2270 -0.8738 -1.2975 45 1 4.7896 5.0196 0.7394 46 1 3.8351 5.3222 -1.9858 47 1 2.1654 6.0543 1.8099 48 1 3.4020 7.6758 0.4825 49 1 1.3276 4.5115 0.0005 50 1 0.2120 2.3187 0.0000 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:31 Heat of formation + Delta-G solvation = 8.510270 kcal Electronic energy + Delta-G solvation = -33251.765402 eV Core-core repulsion = 28635.972138 eV Total energy + Delta-G solvation = -4615.793263 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.09782 -41.81280 -41.20427 -40.16676 -39.28373 -38.12146 -36.82580 -35.10221 -33.55036 -32.26537 -31.43211 -30.95468 -29.68003 -28.55086 -28.25178 -26.83848 -26.05013 -24.52547 -23.59188 -22.46620 -21.95925 -21.88082 -21.59905 -20.43104 -19.92579 -18.62019 -18.21627 -17.91271 -17.80575 -17.51353 -17.19326 -16.91643 -16.75734 -16.50070 -16.41708 -15.90895 -15.84788 -15.46685 -15.38034 -15.12165 -14.90160 -14.90003 -14.59788 -14.40985 -14.33221 -13.85577 -13.75444 -13.66220 -13.51090 -13.47348 -13.40133 -13.17952 -12.94879 -12.55947 -12.33056 -12.15156 -12.03573 -11.74109 -11.72878 -11.64878 -11.56980 -11.34642 -10.88047 -10.30981 -10.20947 -10.14824 -9.69347 -9.48414 -9.07284 -4.95946 0.21363 0.33166 1.00989 1.39855 1.42099 1.49582 1.58201 1.74012 1.99370 2.09868 2.14916 2.53057 2.59267 3.18473 3.31618 3.46659 3.53152 3.64282 3.66408 3.70968 3.79741 3.88533 3.89938 3.93542 3.95067 4.02222 4.03534 4.05031 4.14037 4.23385 4.25067 4.30636 4.37363 4.40249 4.51700 4.52107 4.60278 4.69161 4.72130 4.74184 4.85486 4.91880 5.00518 5.03303 5.06060 5.14210 5.22638 5.27718 5.43756 5.48096 5.77106 6.09787 6.11011 6.29080 6.37560 6.82022 6.82717 7.10909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.248 4.248 5 C 0.192 3.808 6 O -0.272 6.272 7 C 0.038 3.962 8 C 0.519 3.481 9 O -0.505 6.505 10 N -0.711 5.711 11 C 0.120 3.880 12 H 0.108 0.892 13 C -0.134 4.134 14 C -0.122 4.122 15 H 0.094 0.906 16 C 0.141 3.859 17 N -0.372 5.372 18 C 0.050 3.950 19 C -0.275 4.275 20 C 0.041 3.959 21 N -0.289 5.289 22 C -0.137 4.137 23 C -0.185 4.185 24 C -0.052 4.052 25 O -0.533 6.533 26 Si 0.680 3.320 27 C -0.034 4.034 28 C -0.239 4.239 29 H 0.103 0.897 30 H 0.059 0.941 31 H 0.060 0.940 32 H 0.138 0.862 33 H 0.097 0.903 34 H 0.095 0.905 35 H 0.402 0.598 36 H 0.076 0.924 37 H 0.094 0.906 38 H 0.088 0.912 39 H 0.098 0.902 40 H 0.172 0.828 41 H 0.146 0.854 42 H 0.182 0.818 43 H 0.102 0.898 44 H 0.079 0.921 45 H 0.113 0.887 46 H 0.372 0.628 47 H -0.257 1.257 48 H -0.254 1.254 49 H 0.139 0.861 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.375 -6.662 -3.294 8.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.145 3.855 6 O -0.183 6.183 7 C -0.041 4.041 8 C 0.304 3.696 9 O -0.378 6.378 10 N -0.365 5.365 11 C 0.015 3.985 12 H 0.126 0.874 13 C -0.172 4.172 14 C -0.141 4.141 15 H 0.113 0.887 16 C 0.020 3.980 17 N -0.155 5.155 18 C -0.096 4.096 19 C -0.304 4.304 20 C -0.145 4.145 21 N -0.111 5.111 22 C -0.175 4.175 23 C -0.186 4.186 24 C -0.162 4.162 25 O -0.337 6.337 26 Si 0.581 3.419 27 C -0.051 4.051 28 C -0.258 4.258 29 H 0.121 0.879 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.155 0.845 33 H 0.115 0.885 34 H 0.113 0.887 35 H 0.236 0.764 36 H 0.095 0.905 37 H 0.112 0.888 38 H 0.106 0.894 39 H 0.116 0.884 40 H 0.189 0.811 41 H 0.164 0.836 42 H 0.199 0.801 43 H 0.120 0.880 44 H 0.098 0.902 45 H 0.131 0.869 46 H 0.219 0.781 47 H -0.182 1.182 48 H -0.179 1.179 49 H 0.157 0.843 50 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -2.822 -3.895 -2.839 5.585 hybrid contribution 0.235 -2.231 0.536 2.306 sum -2.587 -6.126 -2.302 7.037 Atomic orbital electron populations 1.23150 0.77584 1.04426 1.01796 1.86075 1.22038 1.26663 1.88007 1.18678 0.91428 0.84410 0.92696 1.20393 0.92976 0.97319 1.16019 1.18407 0.81976 0.92463 0.92648 1.86265 1.14762 1.29562 1.87725 1.22503 0.90251 0.87143 1.04234 1.19987 0.87287 0.85616 0.76755 1.90808 1.79648 1.20776 1.46528 1.45447 1.05677 1.09068 1.76273 1.21849 0.78960 1.00159 0.97522 0.87402 1.23408 1.01563 0.94751 0.97515 1.22908 0.96914 0.97488 0.96762 0.88726 1.21794 0.98281 0.98544 0.79352 1.48749 1.50151 1.08625 1.07930 1.22602 1.01333 0.87758 0.97942 1.21557 1.13850 1.00808 0.94193 1.23952 0.99557 0.91747 0.99249 1.77406 1.21234 1.21868 0.90567 1.23360 1.01229 0.97185 0.95758 1.19608 0.92845 0.94512 1.11678 1.24857 1.04519 0.97532 0.89329 1.86600 1.37522 1.93447 1.16130 0.95361 0.83104 0.78090 0.85313 1.20592 0.92304 0.97353 0.94896 1.21131 1.00510 0.91744 1.12440 0.87900 0.92243 0.92163 0.84458 0.88537 0.88693 0.76393 0.90525 0.88795 0.89422 0.88400 0.81062 0.83578 0.80140 0.87996 0.90216 0.86919 0.78126 1.18195 1.17872 0.84345 0.84630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.32 -0.32 10.49 -19.41 -0.20 -0.52 16 3 C 0.17 0.24 6.68 -39.24 -0.26 -0.02 16 4 C -0.25 -0.39 8.97 -39.29 -0.35 -0.74 16 5 C 0.19 0.55 6.66 -39.24 -0.26 0.29 16 6 O -0.27 -1.11 8.99 -39.32 -0.35 -1.46 16 7 C 0.04 0.01 5.22 36.00 0.19 0.20 16 8 C 0.52 1.26 7.91 -10.99 -0.09 1.18 16 9 O -0.50 -3.80 16.10 -14.35 -0.23 -4.03 16 10 N -0.71 0.61 5.27 -53.01 -0.28 0.33 16 11 C 0.12 -0.07 4.32 -67.11 -0.29 -0.36 16 12 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 13 C -0.13 0.03 7.43 -25.91 -0.19 -0.16 16 14 C -0.12 0.27 3.71 -89.81 -0.33 -0.06 16 15 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 16 C 0.14 -0.29 6.35 -4.04 -0.03 -0.32 16 17 N -0.37 -0.34 3.68 -61.36 -0.23 -0.57 16 18 C 0.05 0.00 11.45 -17.23 -0.20 -0.20 16 19 C -0.27 -0.23 10.80 -40.01 -0.43 -0.66 16 20 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 21 N -0.29 -0.95 12.42 30.63 0.38 -0.57 16 22 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 23 C -0.19 -0.39 5.27 -104.44 -0.55 -0.94 16 24 C -0.05 -0.13 2.37 36.01 0.09 -0.05 16 25 O -0.53 -1.75 12.88 -35.23 -0.45 -2.20 16 26 Si 0.68 0.34 29.92 -169.99 -5.09 -4.75 16 27 C -0.03 0.00 8.65 -39.63 -0.34 -0.34 16 28 C -0.24 0.00 9.04 -39.41 -0.36 -0.36 16 29 H 0.10 -0.40 8.14 -51.92 -0.42 -0.82 16 30 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 31 H 0.06 -0.21 7.66 -51.93 -0.40 -0.60 16 32 H 0.14 -0.04 6.30 -52.49 -0.33 -0.37 16 33 H 0.10 -0.21 7.66 -51.93 -0.40 -0.60 16 34 H 0.10 -0.18 7.66 -51.93 -0.40 -0.58 16 35 H 0.40 -1.51 8.70 -40.82 -0.36 -1.86 16 36 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 37 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 38 H 0.09 -0.19 7.84 -51.93 -0.41 -0.60 16 39 H 0.10 -0.44 8.07 -51.93 -0.42 -0.86 16 40 H 0.17 -0.57 8.06 -52.49 -0.42 -0.99 16 41 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.18 -0.08 8.06 -52.49 -0.42 -0.51 16 43 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 44 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 45 H 0.11 0.53 7.82 -51.93 -0.41 0.12 16 46 H 0.37 -0.49 8.70 45.56 0.40 -0.10 16 47 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 48 H -0.25 -0.99 7.11 56.52 0.40 -0.59 16 49 H 0.14 -0.38 5.13 -52.49 -0.27 -0.65 16 50 H 0.14 -0.31 6.29 -52.49 -0.33 -0.64 16 LS Contribution 417.71 15.07 6.29 6.29 Total: 0.00 -13.09 417.71 -10.06 -23.15 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: -7.09 Total: -14.18 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -2.82 Total: -1.49 kcal Atomic # 7 Polarization: -0.69 SS G_CDS: -0.12 Total: -0.81 kcal Atomic # 8 Polarization: -6.98 SS G_CDS: -1.24 Total: -8.22 kcal Atomic # 14 Polarization: 0.34 SS G_CDS: -5.09 Total: -4.75 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -13.09 -10.06 -23.15 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.664 kcal (2) G-P(sol) polarization free energy of solvation -13.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.153 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds