Wall clock time and date at job start Sun Mar 7 2021 04:37:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35894 * 116.99823 * 2 1 4 4 C 1.38619 * 120.02869 * 179.97438 * 3 2 1 5 5 C 1.38650 * 119.89277 * 180.02562 * 4 3 2 6 6 O 1.35895 * 120.02959 * 179.97438 * 5 4 3 7 7 C 1.42903 * 116.99888 * 359.97438 * 6 5 4 8 8 C 1.50698 * 109.47104 * 179.97438 * 7 6 5 9 9 O 1.21282 * 120.00304 * 0.02562 * 8 7 6 10 10 N 1.34776 * 119.99780 * 179.97438 * 8 7 6 11 11 C 1.46500 * 119.99906 * 179.97438 * 10 8 7 12 12 H 1.09000 * 112.84863 * 336.20030 * 11 10 8 13 13 C 1.53786 * 113.68966 * 107.46584 * 11 10 8 14 14 C 1.53785 * 87.08063 * 89.12699 * 13 11 10 15 15 H 1.08995 * 113.68833 * 270.87150 * 14 13 11 16 16 C 1.52998 * 113.61399 * 139.98129 * 14 13 11 17 17 N 1.46504 * 109.47338 * 87.50134 * 16 14 13 18 18 C 1.34939 * 126.03518 * 124.99720 * 17 16 14 19 19 C 1.35315 * 107.74580 * 180.02562 * 18 17 16 20 20 C 1.39870 * 107.92072 * 0.02562 * 19 18 17 21 21 N 1.30839 * 108.20307 * 359.97438 * 20 19 18 22 22 C 1.53782 * 87.08102 * 25.43376 * 14 13 11 23 23 C 1.38762 * 119.94407 * 0.25132 * 5 4 3 24 24 C 1.50702 * 119.96761 * 179.74660 * 23 5 4 25 25 O 1.42901 * 109.47049 * 75.00829 * 24 23 5 26 26 Si 1.86298 * 109.46589 * 194.99980 * 24 23 5 27 27 C 1.38193 * 120.05410 * 359.49433 * 23 5 4 28 28 C 1.38158 * 120.10659 * 0.50883 * 27 23 5 29 29 H 1.09008 * 109.47105 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47506 * 299.99474 * 1 2 3 31 31 H 1.09002 * 109.47508 * 59.99919 * 1 2 3 32 32 H 1.08000 * 120.04884 * 0.02562 * 4 3 2 33 33 H 1.09001 * 109.46758 * 59.99796 * 7 6 5 34 34 H 1.08997 * 109.46967 * 300.00188 * 7 6 5 35 35 H 0.96998 * 120.00172 * 0.02562 * 10 8 7 36 36 H 1.08996 * 113.61590 * 334.57987 * 13 11 10 37 37 H 1.08995 * 113.61371 * 203.67442 * 13 11 10 38 38 H 1.09005 * 109.46930 * 327.50413 * 16 14 13 39 39 H 1.09003 * 109.47237 * 207.50432 * 16 14 13 40 40 H 1.07999 * 126.13213 * 0.02562 * 18 17 16 41 41 H 1.07999 * 126.04347 * 179.73376 * 19 18 17 42 42 H 1.08001 * 125.90246 * 179.97438 * 20 19 18 43 43 H 1.09001 * 113.61407 * 89.11246 * 22 14 13 44 44 H 1.09003 * 113.61477 * 220.01761 * 22 14 13 45 45 H 1.08994 * 109.47183 * 315.00080 * 24 23 5 46 46 H 0.96697 * 114.00213 * 59.98900 * 25 24 23 47 47 H 1.48507 * 110.00024 * 58.68715 * 26 24 23 48 48 H 1.48499 * 110.00064 * 180.02562 * 26 24 23 49 49 H 1.07999 * 119.94466 * 180.25328 * 27 23 5 50 50 H 1.08000 * 119.96791 * 179.72288 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0566 2.5210 0.0011 6 8 5.4135 2.5961 0.0021 7 6 6.1316 1.3606 0.0032 8 6 7.6124 1.6403 0.0036 9 8 8.0134 2.7849 0.0035 10 7 8.4911 0.6184 0.0052 11 6 9.9307 0.8902 0.0050 12 1 10.1761 1.8713 -0.4016 13 6 10.6161 0.5914 1.3489 14 6 10.8325 -0.8402 0.8305 15 1 10.0089 -1.5172 1.0571 16 6 12.1990 -1.4240 1.1951 17 7 12.1217 -2.0631 2.5111 18 6 12.4579 -3.3387 2.7950 19 6 12.2424 -3.5377 4.1160 20 6 11.7573 -2.3429 4.6578 21 7 11.6847 -1.4581 3.6966 22 6 10.7731 -0.2511 -0.5888 23 6 3.2969 3.6822 0.0063 24 6 3.9773 5.0269 0.0127 25 8 4.5036 5.3006 -1.2874 26 14 2.7437 6.3447 0.4732 27 6 1.9171 3.6066 0.0005 28 6 1.2905 2.3752 0.0000 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5137 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 4.0196 0.3792 0.0005 33 1 5.8706 0.7879 -0.8868 34 1 5.8692 0.7887 0.8932 35 1 8.1705 -0.2971 0.0056 36 1 9.9433 0.6488 2.2045 37 1 11.5423 1.1459 1.4995 38 1 12.9399 -0.6249 1.2222 39 1 12.4891 -2.1633 0.4485 40 1 12.8320 -4.0699 2.0937 41 1 12.4104 -4.4580 4.6557 42 1 11.4890 -2.1789 5.6910 43 1 11.7423 0.0732 -0.9679 44 1 10.2270 -0.8738 -1.2975 45 1 4.7896 5.0196 0.7394 46 1 3.8351 5.3222 -1.9858 47 1 2.1654 6.0543 1.8099 48 1 3.4020 7.6758 0.4825 49 1 1.3276 4.5115 0.0005 50 1 0.2120 2.3187 0.0000 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688104_4974312.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:30 Heat of formation + Delta-G solvation = 4.536180 kcal Electronic energy + Delta-G solvation = -33251.937731 eV Core-core repulsion = 28635.972138 eV Total energy + Delta-G solvation = -4615.965593 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.10204 -41.87607 -41.26217 -40.17603 -39.38229 -38.26971 -36.93748 -35.18321 -33.58719 -32.30468 -31.46502 -30.96774 -29.73232 -28.42634 -28.19950 -26.74884 -26.13442 -24.51425 -23.61208 -22.52431 -22.01179 -21.90936 -21.60518 -20.41386 -19.95018 -18.68880 -18.23584 -18.00022 -17.86647 -17.60737 -17.20655 -16.93635 -16.69481 -16.54139 -16.41137 -15.99323 -15.89859 -15.53599 -15.46871 -15.16232 -14.95046 -14.85520 -14.64139 -14.47775 -14.38650 -13.90277 -13.76288 -13.62803 -13.46344 -13.43463 -13.35032 -13.18134 -12.86290 -12.51900 -12.28703 -12.23582 -12.03316 -11.88768 -11.71750 -11.64873 -11.59736 -11.27433 -11.13338 -10.37374 -10.35317 -10.23323 -9.72829 -9.49159 -9.12433 -5.05400 0.18487 0.27699 1.00964 1.29933 1.31020 1.35975 1.63498 1.67416 1.95012 1.97344 2.22712 2.50175 2.55443 3.30598 3.42467 3.43036 3.58593 3.64871 3.71348 3.73049 3.80288 3.87621 3.95617 4.00268 4.06338 4.08450 4.13859 4.20796 4.32358 4.34158 4.37271 4.42729 4.43611 4.45193 4.59192 4.62753 4.70872 4.77162 4.78555 4.79102 4.91161 4.97417 5.00087 5.01142 5.08614 5.15690 5.21210 5.25730 5.44171 5.48477 5.74849 6.08172 6.19434 6.31128 6.37225 6.79135 6.85208 7.01151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.164 3.836 4 C -0.255 4.255 5 C 0.172 3.828 6 O -0.305 6.305 7 C 0.037 3.963 8 C 0.515 3.485 9 O -0.567 6.567 10 N -0.693 5.693 11 C 0.109 3.891 12 H 0.083 0.917 13 C -0.138 4.138 14 C -0.108 4.108 15 H 0.092 0.908 16 C 0.134 3.866 17 N -0.376 5.376 18 C 0.054 3.946 19 C -0.293 4.293 20 C 0.024 3.976 21 N -0.332 5.332 22 C -0.113 4.113 23 C -0.203 4.203 24 C -0.070 4.070 25 O -0.557 6.557 26 Si 0.797 3.203 27 C -0.031 4.031 28 C -0.236 4.236 29 H 0.115 0.885 30 H 0.068 0.932 31 H 0.072 0.928 32 H 0.150 0.850 33 H 0.124 0.876 34 H 0.117 0.883 35 H 0.419 0.581 36 H 0.047 0.953 37 H 0.088 0.912 38 H 0.087 0.913 39 H 0.132 0.868 40 H 0.207 0.793 41 H 0.160 0.840 42 H 0.191 0.809 43 H 0.117 0.883 44 H 0.098 0.902 45 H 0.078 0.922 46 H 0.391 0.609 47 H -0.280 1.280 48 H -0.304 1.304 49 H 0.168 0.832 50 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.720 -8.869 -4.613 11.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.117 3.883 4 C -0.274 4.274 5 C 0.126 3.874 6 O -0.217 6.217 7 C -0.041 4.041 8 C 0.302 3.698 9 O -0.445 6.445 10 N -0.346 5.346 11 C 0.004 3.996 12 H 0.101 0.899 13 C -0.177 4.177 14 C -0.127 4.127 15 H 0.110 0.890 16 C 0.014 3.986 17 N -0.158 5.158 18 C -0.093 4.093 19 C -0.322 4.322 20 C -0.161 4.161 21 N -0.155 5.155 22 C -0.152 4.152 23 C -0.204 4.204 24 C -0.178 4.178 25 O -0.365 6.365 26 Si 0.702 3.298 27 C -0.048 4.048 28 C -0.255 4.255 29 H 0.134 0.866 30 H 0.087 0.913 31 H 0.091 0.909 32 H 0.168 0.832 33 H 0.142 0.858 34 H 0.135 0.865 35 H 0.256 0.744 36 H 0.066 0.934 37 H 0.107 0.893 38 H 0.105 0.895 39 H 0.150 0.850 40 H 0.224 0.776 41 H 0.177 0.823 42 H 0.208 0.792 43 H 0.135 0.865 44 H 0.117 0.883 45 H 0.096 0.904 46 H 0.240 0.760 47 H -0.207 1.207 48 H -0.232 1.232 49 H 0.185 0.815 50 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -4.172 -6.192 -4.182 8.558 hybrid contribution 0.699 -1.592 0.965 1.989 sum -3.474 -7.785 -3.217 9.112 Atomic orbital electron populations 1.23418 0.75891 1.05719 1.02818 1.86054 1.23868 1.26575 1.87927 1.18871 0.91540 0.85136 0.92709 1.20537 0.93606 0.97265 1.15976 1.18647 0.81615 0.93396 0.93788 1.86222 1.15757 1.31551 1.88219 1.22700 0.88370 0.86556 1.06511 1.20482 0.88548 0.85181 0.75624 1.90775 1.80707 1.23245 1.49796 1.45335 1.05410 1.09354 1.74517 1.21928 0.79342 1.00466 0.97853 0.89892 1.23382 1.00778 0.96935 0.96564 1.22768 0.97097 0.95757 0.97051 0.88963 1.22072 0.98017 0.99587 0.78935 1.48996 1.49689 1.09061 1.08076 1.23198 0.99957 0.87805 0.98315 1.21855 1.14399 1.00989 0.94992 1.24305 0.99663 0.92308 0.99811 1.77345 1.22957 1.23279 0.91874 1.23283 1.01326 0.95289 0.95267 1.19759 0.93885 0.93959 1.12804 1.25159 1.04385 0.99724 0.88528 1.86542 1.39300 1.93585 1.17074 0.94131 0.80220 0.72988 0.82459 1.20873 0.91438 0.98681 0.93800 1.21459 1.01834 0.91103 1.11089 0.86634 0.91336 0.90948 0.83207 0.85790 0.86497 0.74364 0.93366 0.89342 0.89512 0.84967 0.77582 0.82282 0.79175 0.86457 0.88342 0.90384 0.75983 1.20699 1.23208 0.81512 0.81990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.37 10.49 -92.35 -0.97 -1.33 16 3 C 0.16 0.35 6.68 22.49 0.15 0.50 16 4 C -0.25 -0.89 8.97 22.46 0.20 -0.68 16 5 C 0.17 1.24 6.66 22.49 0.15 1.39 16 6 O -0.31 -3.28 8.99 -73.33 -0.66 -3.94 16 7 C 0.04 0.08 5.22 71.24 0.37 0.45 16 8 C 0.52 3.74 7.91 87.66 0.69 4.43 16 9 O -0.57 -10.83 16.10 16.00 0.26 -10.58 16 10 N -0.69 0.35 5.27 -440.03 -2.32 -1.97 16 11 C 0.11 0.03 4.32 45.52 0.20 0.23 16 12 H 0.08 0.48 7.46 -2.39 -0.02 0.46 16 13 C -0.14 -0.22 7.43 31.12 0.23 0.01 16 14 C -0.11 0.51 3.71 -10.27 -0.04 0.47 16 15 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 16 C 0.13 -0.69 6.35 86.38 0.55 -0.15 16 17 N -0.38 -0.58 3.68 -348.06 -1.28 -1.86 16 18 C 0.05 -0.06 11.45 83.54 0.96 0.89 16 19 C -0.29 -0.47 10.80 21.99 0.24 -0.23 16 20 C 0.02 0.12 12.03 85.24 1.02 1.15 16 21 N -0.33 -2.62 12.42 -57.02 -0.71 -3.33 16 22 C -0.11 0.87 7.39 31.12 0.23 1.10 16 23 C -0.20 -1.07 5.27 -19.75 -0.10 -1.18 16 24 C -0.07 -0.51 2.37 71.24 0.17 -0.34 16 25 O -0.56 -4.83 12.88 -148.98 -1.92 -6.75 16 26 Si 0.80 1.11 29.92 68.60 2.05 3.16 16 27 C -0.03 0.02 8.65 22.24 0.19 0.22 16 28 C -0.24 0.32 9.04 22.38 0.20 0.52 16 29 H 0.12 -1.07 8.14 -2.38 -0.02 -1.09 16 30 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 31 H 0.07 -0.64 7.66 -2.39 -0.02 -0.66 16 32 H 0.15 -0.09 6.30 -2.91 -0.02 -0.11 16 33 H 0.12 -0.51 7.66 -2.39 -0.02 -0.53 16 34 H 0.12 -0.35 7.66 -2.39 -0.02 -0.37 16 35 H 0.42 -3.18 8.70 -92.71 -0.81 -3.99 16 36 H 0.05 0.35 8.14 -2.39 -0.02 0.33 16 37 H 0.09 0.21 7.90 -2.39 -0.02 0.19 16 38 H 0.09 -0.41 7.84 -2.38 -0.02 -0.43 16 39 H 0.13 -1.58 8.07 -2.39 -0.02 -1.60 16 40 H 0.21 -1.94 8.06 -2.91 -0.02 -1.97 16 41 H 0.16 -0.34 8.06 -2.91 -0.02 -0.37 16 42 H 0.19 0.15 8.06 -2.91 -0.02 0.12 16 43 H 0.12 -1.19 8.10 -2.39 -0.02 -1.20 16 44 H 0.10 -1.04 8.14 -2.39 -0.02 -1.05 16 45 H 0.08 1.05 7.82 -2.39 -0.02 1.03 16 46 H 0.39 -0.62 8.70 -74.06 -0.64 -1.26 16 47 H -0.28 -1.44 7.11 99.48 0.71 -0.73 16 48 H -0.30 -2.88 7.11 99.48 0.71 -2.18 16 49 H 0.17 -1.25 5.13 -2.91 -0.01 -1.27 16 50 H 0.16 -1.17 6.29 -2.91 -0.02 -1.19 16 Total: 0.00 -36.17 417.71 0.56 -35.61 By element: Atomic # 1 Polarization: -18.39 SS G_CDS: -0.42 Total: -18.81 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 6.53 Total: 9.79 kcal Atomic # 7 Polarization: -2.85 SS G_CDS: -4.31 Total: -7.16 kcal Atomic # 8 Polarization: -19.31 SS G_CDS: -3.29 Total: -22.60 kcal Atomic # 14 Polarization: 1.11 SS G_CDS: 2.05 Total: 3.16 kcal Total: -36.17 0.56 -35.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_4974312.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.144 kcal (2) G-P(sol) polarization free energy of solvation -36.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.559 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.608 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.536 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds