Wall clock time and date at job start Sun Mar 7 2021 04:37:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35987 * 116.99845 * 2 1 4 4 C 1.39157 * 120.07215 * 180.02562 * 3 2 1 5 5 O 1.35997 * 120.07218 * 359.97438 * 4 3 2 6 6 C 1.42900 * 116.99937 * 179.97438 * 5 4 3 7 7 C 1.50702 * 109.47002 * 179.97438 * 6 5 4 8 8 O 1.21284 * 120.00100 * 0.02562 * 7 6 5 9 9 N 1.34775 * 119.99945 * 180.02562 * 7 6 5 10 10 C 1.46503 * 119.99983 * 180.02562 * 9 7 6 11 11 H 1.08999 * 112.85029 * 336.19453 * 10 9 7 12 12 C 1.53786 * 113.61344 * 107.49657 * 10 9 7 13 13 C 1.53786 * 87.07808 * 89.11766 * 12 10 9 14 14 H 1.08997 * 113.68844 * 270.87069 * 13 12 10 15 15 C 1.52994 * 113.61243 * 139.97913 * 13 12 10 16 16 N 1.46499 * 109.47350 * 87.50324 * 15 13 12 17 17 C 1.34947 * 126.04291 * 124.71342 * 16 15 13 18 18 C 1.35317 * 107.74830 * 179.84045 * 17 16 15 19 19 C 1.39867 * 107.91896 * 0.42718 * 18 17 16 20 20 N 1.30833 * 108.20234 * 359.73209 * 19 18 17 21 21 C 1.53777 * 113.61376 * 204.99722 * 10 9 7 22 22 C 1.38558 * 119.85607 * 179.97438 * 4 3 2 23 23 C 1.38250 * 120.00006 * 359.73238 * 22 4 3 24 24 C 1.38252 * 120.14127 * 0.54306 * 23 22 4 25 25 C 1.50705 * 119.92621 * 179.73018 * 24 23 22 26 26 O 1.42894 * 109.47171 * 119.72540 * 25 24 23 27 27 Si 1.86298 * 109.46780 * 359.71981 * 25 24 23 28 28 C 1.38245 * 120.14917 * 359.44836 * 24 23 22 29 29 H 1.08997 * 109.46671 * 60.00837 * 1 2 3 30 30 H 1.09007 * 109.46880 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.47391 * 300.00357 * 1 2 3 32 32 H 1.08994 * 109.47455 * 300.00230 * 6 5 4 33 33 H 1.08999 * 109.46662 * 60.00257 * 6 5 4 34 34 H 0.97000 * 120.00050 * 359.97438 * 9 7 6 35 35 H 1.09001 * 113.60899 * 203.66132 * 12 10 9 36 36 H 1.08992 * 113.61616 * 334.56780 * 12 10 9 37 37 H 1.09004 * 109.47129 * 207.49783 * 15 13 12 38 38 H 1.08996 * 109.47537 * 327.49775 * 15 13 12 39 39 H 1.08002 * 126.12291 * 359.97438 * 17 16 15 40 40 H 1.08005 * 126.03746 * 180.15539 * 18 17 16 41 41 H 1.07998 * 125.89777 * 179.72399 * 19 18 17 42 42 H 1.08996 * 113.61673 * 25.42733 * 21 10 9 43 43 H 1.08997 * 113.61597 * 156.25402 * 21 10 9 44 44 H 1.07997 * 120.00240 * 179.97438 * 22 4 3 45 45 H 1.07993 * 119.93049 * 180.28735 * 23 22 4 46 46 H 1.09004 * 109.46779 * 239.72863 * 25 24 23 47 47 H 0.96709 * 113.99337 * 180.02562 * 26 25 24 48 48 H 1.48506 * 109.99834 * 60.00830 * 27 25 24 49 49 H 1.48502 * 110.00011 * 181.32094 * 27 25 24 50 50 H 1.07995 * 120.00214 * 180.24904 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1476 -0.0005 6 6 5.6003 0.3006 -0.0017 7 6 6.2519 -1.0583 -0.0009 8 8 5.5670 -2.0592 0.0001 9 7 7.5957 -1.1613 -0.0012 10 6 8.2291 -2.4823 -0.0010 11 1 7.5836 -3.2612 0.4049 12 6 8.8771 -2.8550 -1.3449 13 6 10.1580 -2.1819 -0.8243 14 1 10.2155 -1.1169 -1.0491 15 6 11.4383 -2.9360 -1.1890 16 7 11.9084 -2.4928 -2.5038 17 6 13.1337 -2.0022 -2.7850 18 6 13.1694 -1.7143 -4.1067 19 6 11.9201 -2.0309 -4.6500 20 7 11.1634 -2.4976 -3.6901 21 6 9.6471 -2.4854 0.5941 22 6 4.0603 2.5232 -0.0011 23 6 3.3030 3.6798 -0.0067 24 6 1.9225 3.6057 -0.0004 25 6 1.1016 4.8696 -0.0004 26 8 0.2768 4.9019 -1.1668 27 14 2.2366 6.3470 -0.0010 28 6 1.2932 2.3747 0.0000 29 1 -0.3632 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8899 32 1 5.9059 0.8500 -0.8921 33 1 5.9072 0.8508 0.8878 34 1 8.1435 -0.3607 -0.0023 35 1 8.9794 -3.9295 -1.4972 36 1 8.4328 -2.3457 -2.2000 37 1 12.2052 -2.7327 -0.4415 38 1 11.2339 -4.0062 -1.2180 39 1 13.9419 -1.8660 -2.0816 40 1 14.0122 -1.3074 -4.6459 41 1 11.6300 -1.9106 -5.6833 42 1 9.8244 -1.6778 1.3042 43 1 9.9594 -3.4585 0.9731 44 1 5.1386 2.5839 -0.0011 45 1 3.7908 4.6433 -0.0118 46 1 0.4732 4.8946 0.8899 47 1 -0.2799 5.6899 -1.2330 48 1 3.0988 6.3245 -1.2099 49 1 1.4396 7.5996 0.0312 50 1 0.2147 2.3196 0.0008 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:39 Heat of formation + Delta-G solvation = 12.403093 kcal Electronic energy + Delta-G solvation = -32883.617473 eV Core-core repulsion = 28267.993015 eV Total energy + Delta-G solvation = -4615.624458 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.08757 -41.74053 -41.17412 -39.84690 -38.93482 -38.67636 -37.08590 -35.08885 -33.54148 -32.09295 -31.41154 -30.95876 -29.77743 -28.50013 -28.21077 -26.83049 -26.15029 -24.42927 -23.48927 -22.44828 -21.93510 -21.80524 -21.58215 -20.41752 -19.65779 -18.65659 -18.41736 -18.13303 -18.08611 -17.50573 -17.39817 -16.97543 -16.52792 -16.43470 -16.11861 -15.91631 -15.81339 -15.67005 -15.45093 -15.28287 -14.90532 -14.84765 -14.50258 -14.29697 -14.02720 -14.00037 -13.81258 -13.66038 -13.50400 -13.46589 -13.42741 -12.92756 -12.77292 -12.53528 -12.31895 -12.19371 -12.12477 -11.90289 -11.72407 -11.68320 -11.56105 -11.33790 -10.85428 -10.54088 -10.30206 -10.13424 -9.71487 -9.47729 -8.79391 -4.99806 0.23339 0.35321 1.01636 1.24807 1.44840 1.51933 1.56746 1.59019 1.92880 2.00080 2.36700 2.54365 2.58861 3.19245 3.29073 3.32405 3.48388 3.53961 3.67170 3.70631 3.80317 3.86093 3.91159 3.94862 3.97086 3.98779 4.05629 4.18628 4.24178 4.26439 4.31403 4.32855 4.34930 4.45754 4.52575 4.61123 4.61963 4.68387 4.70194 4.72849 4.86302 4.92675 5.01677 5.04062 5.07485 5.14579 5.14879 5.44677 5.47399 5.60192 5.77815 6.00988 6.10504 6.34017 6.40052 6.59632 6.83480 7.13334 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.039 3.961 7 C 0.519 3.481 8 O -0.506 6.506 9 N -0.711 5.711 10 C 0.120 3.880 11 H 0.108 0.892 12 C -0.134 4.134 13 C -0.122 4.122 14 H 0.095 0.905 15 C 0.141 3.859 16 N -0.372 5.372 17 C 0.049 3.951 18 C -0.275 4.275 19 C 0.041 3.959 20 N -0.289 5.289 21 C -0.137 4.137 22 C -0.169 4.169 23 C -0.111 4.111 24 C -0.069 4.069 25 C -0.074 4.074 26 O -0.536 6.536 27 Si 0.683 3.317 28 C -0.144 4.144 29 H 0.056 0.944 30 H 0.103 0.897 31 H 0.056 0.944 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.402 0.598 35 H 0.093 0.907 36 H 0.076 0.924 37 H 0.098 0.902 38 H 0.088 0.912 39 H 0.172 0.828 40 H 0.146 0.854 41 H 0.182 0.818 42 H 0.079 0.921 43 H 0.101 0.899 44 H 0.140 0.860 45 H 0.133 0.867 46 H 0.077 0.923 47 H 0.380 0.620 48 H -0.254 1.254 49 H -0.261 1.261 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.871 4.487 4.655 8.095 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.304 3.696 8 O -0.379 6.379 9 N -0.365 5.365 10 C 0.015 3.985 11 H 0.126 0.874 12 C -0.173 4.173 13 C -0.141 4.141 14 H 0.113 0.887 15 C 0.020 3.980 16 N -0.155 5.155 17 C -0.097 4.097 18 C -0.304 4.304 19 C -0.145 4.145 20 N -0.110 5.110 21 C -0.175 4.175 22 C -0.187 4.187 23 C -0.129 4.129 24 C -0.069 4.069 25 C -0.183 4.183 26 O -0.344 6.344 27 Si 0.584 3.416 28 C -0.163 4.163 29 H 0.075 0.925 30 H 0.121 0.879 31 H 0.074 0.926 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.236 0.764 35 H 0.112 0.888 36 H 0.095 0.905 37 H 0.116 0.884 38 H 0.106 0.894 39 H 0.189 0.811 40 H 0.164 0.836 41 H 0.199 0.801 42 H 0.098 0.902 43 H 0.120 0.880 44 H 0.158 0.842 45 H 0.150 0.850 46 H 0.095 0.905 47 H 0.228 0.772 48 H -0.179 1.179 49 H -0.187 1.187 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.702 2.972 4.586 6.601 hybrid contribution 0.091 1.320 -0.929 1.617 sum 3.793 4.293 3.656 6.796 Atomic orbital electron populations 1.23126 0.78196 1.04363 1.01325 1.86247 1.21284 1.25320 1.88584 1.18244 0.89000 0.85511 1.01136 1.18260 0.88284 0.85741 1.01913 1.86276 1.15959 1.27741 1.88895 1.22463 0.81384 0.96147 1.04012 1.20022 0.82330 0.90610 0.76683 1.90801 1.62530 1.38006 1.46549 1.45455 1.05833 1.08902 1.76324 1.21849 0.93670 0.85473 0.97504 0.87411 1.23410 0.94727 1.01582 0.97537 1.22909 0.93883 1.00525 0.96760 0.88716 1.21792 0.97156 0.99636 0.79385 1.48751 1.09485 1.49256 1.07961 1.22604 0.89601 0.99501 0.97950 1.21558 1.00268 1.14450 0.94134 1.23949 0.92675 0.98616 0.99261 1.77405 1.19567 1.23497 0.90575 1.23355 0.94704 1.03719 0.95756 1.20954 1.00426 0.90582 1.06788 1.20614 0.92618 0.97924 1.01711 1.18939 0.92903 0.93186 1.01885 1.24780 0.99200 1.04138 0.90228 1.86595 1.57857 1.46571 1.43335 0.95082 0.82388 0.75174 0.88935 1.20902 1.00326 0.90420 1.04682 0.92531 0.87884 0.92580 0.88806 0.88674 0.76399 0.88812 0.90493 0.88415 0.89417 0.81071 0.83589 0.80142 0.90226 0.88022 0.84230 0.84989 0.90534 0.77231 1.17870 1.18672 0.84292 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.53 10.28 -34.20 -0.35 -1.88 16 3 C 0.11 0.46 6.70 -39.12 -0.26 0.19 16 4 C 0.10 0.37 6.70 -39.12 -0.26 0.10 16 5 O -0.28 -1.27 9.45 -47.36 -0.45 -1.72 16 6 C 0.04 0.00 5.22 36.01 0.19 0.19 16 7 C 0.52 1.15 7.91 -10.99 -0.09 1.06 16 8 O -0.51 -3.78 16.10 -14.36 -0.23 -4.01 16 9 N -0.71 0.86 5.26 -53.01 -0.28 0.58 16 10 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 11 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 12 C -0.13 0.06 7.43 -25.91 -0.19 -0.14 16 13 C -0.12 0.30 3.70 -89.81 -0.33 -0.03 16 14 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 15 C 0.14 -0.33 6.35 -4.05 -0.03 -0.35 16 16 N -0.37 -0.27 3.68 -61.37 -0.23 -0.50 16 17 C 0.05 -0.01 11.45 -17.22 -0.20 -0.21 16 18 C -0.27 -0.19 10.80 -40.01 -0.43 -0.63 16 19 C 0.04 0.08 12.03 -17.37 -0.21 -0.13 16 20 N -0.29 -0.91 12.42 30.62 0.38 -0.53 16 21 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 22 C -0.17 -0.10 9.04 -39.46 -0.36 -0.46 16 23 C -0.11 -0.06 8.66 -39.57 -0.34 -0.41 16 24 C -0.07 -0.12 5.42 -104.61 -0.57 -0.68 16 25 C -0.07 0.00 2.81 36.01 0.10 0.10 16 26 O -0.54 -0.66 12.74 -35.23 -0.45 -1.11 16 27 Si 0.68 -0.75 29.78 -169.99 -5.06 -5.81 16 28 C -0.14 -0.38 8.60 -39.46 -0.34 -0.72 16 29 H 0.06 0.01 7.66 -51.93 -0.40 -0.39 16 30 H 0.10 -0.05 8.14 -51.92 -0.42 -0.47 16 31 H 0.06 -0.03 7.66 -51.93 -0.40 -0.43 16 32 H 0.09 -0.23 7.66 -51.93 -0.40 -0.63 16 33 H 0.10 -0.30 7.66 -51.93 -0.40 -0.70 16 34 H 0.40 -1.71 8.70 -40.82 -0.36 -2.07 16 35 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 36 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 37 H 0.10 -0.46 8.07 -51.93 -0.42 -0.88 16 38 H 0.09 -0.21 7.84 -51.93 -0.41 -0.61 16 39 H 0.17 -0.60 8.06 -52.49 -0.42 -1.02 16 40 H 0.15 -0.15 8.06 -52.48 -0.42 -0.57 16 41 H 0.18 -0.10 8.06 -52.49 -0.42 -0.52 16 42 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 43 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 44 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 45 H 0.13 -0.23 4.87 -52.49 -0.26 -0.48 16 46 H 0.08 -0.13 7.96 -51.93 -0.41 -0.55 16 47 H 0.38 -1.06 8.74 45.56 0.40 -0.66 16 48 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 49 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 50 H 0.14 0.19 6.30 -52.49 -0.33 -0.14 16 LS Contribution 417.91 15.07 6.30 6.30 Total: 0.00 -13.64 417.91 -10.26 -23.89 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: -7.08 Total: -14.03 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -2.81 Total: -1.18 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.12 Total: -0.45 kcal Atomic # 8 Polarization: -7.25 SS G_CDS: -1.48 Total: -8.73 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: -5.06 Total: -5.81 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -13.64 -10.26 -23.89 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.297 kcal (2) G-P(sol) polarization free energy of solvation -13.638 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.659 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.894 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds