Wall clock time and date at job start Sun Mar 7 2021 04:37:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47282 * 2 1 4 4 C 1.50702 * 109.47301 * 120.00108 * 2 1 3 5 5 C 1.38247 * 119.94088 * 244.97603 * 4 2 1 6 6 C 1.38232 * 120.04793 * 179.72243 * 5 4 2 7 7 Br 1.89098 * 120.04102 * 180.27789 * 6 5 4 8 8 C 1.38790 * 119.92495 * 0.53189 * 6 5 4 9 9 O 1.35919 * 120.05960 * 179.76795 * 8 6 5 10 10 C 1.42905 * 117.00019 * 179.72060 * 9 8 6 11 11 C 1.50699 * 109.46972 * 180.02562 * 10 9 8 12 12 O 1.21282 * 120.00041 * 0.02562 * 11 10 9 13 13 N 1.34779 * 120.00037 * 180.02562 * 11 10 9 14 14 C 1.46500 * 120.00169 * 180.02562 * 13 11 10 15 15 H 1.09001 * 112.84782 * 23.79980 * 14 13 11 16 16 C 1.53776 * 113.61596 * 154.99300 * 14 13 11 17 17 C 1.53786 * 87.07796 * 89.11850 * 16 14 13 18 18 H 1.09006 * 113.61498 * 270.88682 * 17 16 14 19 19 C 1.53001 * 113.61642 * 139.98418 * 17 16 14 20 20 N 1.46494 * 109.47189 * 175.00330 * 19 17 16 21 21 C 1.34948 * 126.04336 * 124.71674 * 20 19 17 22 22 C 1.35312 * 107.74840 * 179.83550 * 21 20 19 23 23 C 1.39866 * 107.92139 * 0.42228 * 22 21 20 24 24 N 1.30838 * 108.20097 * 359.73879 * 23 22 21 25 25 C 1.53773 * 87.08068 * 25.43159 * 17 16 14 26 26 C 1.38716 * 119.88308 * 359.49072 * 8 6 5 27 27 C 1.38148 * 119.95780 * 0.25380 * 26 8 6 28 28 H 0.96689 * 114.00443 * 60.00015 * 1 2 3 29 29 H 1.09005 * 109.46945 * 240.00055 * 2 1 3 30 30 H 1.48502 * 109.99848 * 298.68149 * 3 2 1 31 31 H 1.48499 * 110.00129 * 60.00055 * 3 2 1 32 32 H 1.08001 * 119.97218 * 359.97438 * 5 4 2 33 33 H 1.09000 * 109.47187 * 300.00215 * 10 9 8 34 34 H 1.09001 * 109.46558 * 60.00263 * 10 9 8 35 35 H 0.96996 * 119.99844 * 359.97438 * 13 11 10 36 36 H 1.09000 * 113.61647 * 203.66181 * 16 14 13 37 37 H 1.08999 * 113.61567 * 334.57159 * 16 14 13 38 38 H 1.09001 * 109.46765 * 294.99998 * 19 17 16 39 39 H 1.08999 * 109.47374 * 54.99837 * 19 17 16 40 40 H 1.08006 * 126.12116 * 359.97438 * 21 20 19 41 41 H 1.08003 * 126.03896 * 180.15926 * 22 21 20 42 42 H 1.07999 * 125.89922 * 179.71414 * 23 22 21 43 43 H 1.09003 * 113.62027 * 220.01568 * 25 17 16 44 44 H 1.09006 * 113.61775 * 89.11818 * 25 17 16 45 45 H 1.08006 * 120.02636 * 180.23353 * 26 8 6 46 46 H 1.07998 * 119.96952 * 179.97438 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6391 -0.0112 2.1903 6 6 3.0960 -0.6593 3.3225 7 35 4.0573 0.2990 4.6390 8 6 2.8530 -2.0156 3.4895 9 8 3.3051 -2.6566 4.5995 10 6 3.0128 -4.0513 4.7074 11 6 3.5880 -4.5870 5.9932 12 8 4.1886 -3.8472 6.7435 13 7 3.4350 -5.8882 6.3094 14 6 3.9936 -6.4088 7.5597 15 1 4.1312 -5.6360 8.3159 16 6 3.2707 -7.6611 8.0831 17 6 4.2549 -8.4864 7.2374 18 1 3.9107 -8.6671 6.2190 19 6 4.7459 -9.7570 7.9342 20 7 5.5785 -10.5303 7.0097 21 6 6.8438 -10.9419 7.2354 22 6 7.2559 -11.6262 6.1432 23 6 6.2100 -11.6247 5.2145 24 7 5.2041 -10.9681 5.7328 25 6 5.2287 -7.3024 7.3575 26 6 2.1429 -2.7144 2.5243 27 6 1.6839 -2.0607 1.3972 28 1 -0.3933 0.4416 -0.7649 29 1 1.7923 -0.5139 -0.8900 30 1 1.5879 2.4585 -1.2243 31 1 1.5616 2.4679 1.2085 32 1 2.8317 1.0432 2.0573 33 1 1.9327 -4.1975 4.7043 34 1 3.4538 -4.5813 3.8631 35 1 2.9543 -6.4797 5.7096 36 1 3.3830 -7.8135 9.1565 37 1 2.2360 -7.7394 7.7494 38 1 5.3327 -9.4862 8.8120 39 1 3.8894 -10.3574 8.2409 40 1 7.4228 -10.7598 8.1287 41 1 8.2231 -12.0879 6.0102 42 1 6.2297 -12.0857 4.2380 43 1 5.7748 -7.0911 6.4381 44 1 5.8764 -7.3566 8.2326 45 1 1.9492 -3.7691 2.6537 46 1 1.1314 -2.6047 0.6454 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688104_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:43 Heat of formation + Delta-G solvation = 49.152128 kcal Electronic energy + Delta-G solvation = -30456.723499 eV Core-core repulsion = 25977.094407 eV Total energy + Delta-G solvation = -4479.629092 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 422.067 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -42.07651 -41.73507 -41.08089 -39.72245 -38.87267 -37.41238 -35.13575 -33.64077 -33.44120 -32.25255 -31.00202 -30.54745 -29.73446 -28.27120 -26.74470 -26.35159 -24.51643 -23.85436 -22.42584 -22.03122 -21.82998 -21.59087 -20.21075 -19.54204 -18.67305 -18.49674 -18.07934 -17.57272 -17.34033 -17.01399 -16.76409 -16.41614 -16.08465 -15.89096 -15.65624 -15.46664 -15.35926 -14.96298 -14.60388 -14.52418 -14.26394 -14.23377 -14.06340 -13.98506 -13.79651 -13.73025 -13.52863 -13.46246 -12.78557 -12.54348 -12.35808 -12.22456 -12.16914 -11.93785 -11.78066 -11.66462 -11.56257 -11.33682 -11.23435 -11.07457 -10.51059 -10.31589 -10.18902 -10.02206 -9.45490 -9.33754 -4.97080 -0.05133 0.05478 0.60311 1.02041 1.25622 1.34672 1.38073 1.53900 1.68717 1.90710 1.97074 2.34503 2.44984 3.30671 3.39214 3.42092 3.50108 3.54123 3.65866 3.76246 3.78111 3.80911 3.98022 4.00139 4.03165 4.05074 4.10201 4.22675 4.30207 4.38118 4.41728 4.52695 4.63777 4.65580 4.70791 4.74263 4.77441 4.80715 4.92558 4.96708 5.01161 5.04906 5.14318 5.18125 5.28761 5.42338 5.51800 5.77578 6.01841 6.19862 6.37389 6.58959 6.79861 7.06583 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.066 4.066 3 Si 0.732 3.268 4 C -0.113 4.113 5 C -0.058 4.058 6 C -0.140 4.140 7 Br -0.048 7.048 8 C 0.149 3.851 9 O -0.303 6.303 10 C 0.033 3.967 11 C 0.516 3.484 12 O -0.564 6.564 13 N -0.695 5.695 14 C 0.113 3.887 15 H 0.088 0.912 16 C -0.119 4.119 17 C -0.113 4.113 18 H 0.092 0.908 19 C 0.135 3.865 20 N -0.373 5.373 21 C 0.051 3.949 22 C -0.295 4.295 23 C 0.029 3.971 24 N -0.332 5.332 25 C -0.144 4.144 26 C -0.195 4.195 27 C -0.034 4.034 28 H 0.397 0.603 29 H 0.109 0.891 30 H -0.278 1.278 31 H -0.303 1.303 32 H 0.143 0.857 33 H 0.129 0.871 34 H 0.128 0.872 35 H 0.418 0.582 36 H 0.118 0.882 37 H 0.090 0.910 38 H 0.123 0.877 39 H 0.093 0.907 40 H 0.202 0.798 41 H 0.158 0.842 42 H 0.196 0.804 43 H 0.051 0.949 44 H 0.103 0.897 45 H 0.174 0.826 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.800 -6.552 -2.864 7.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.176 4.176 3 Si 0.638 3.362 4 C -0.114 4.114 5 C -0.077 4.077 6 C -0.220 4.220 7 Br 0.037 6.963 8 C 0.101 3.899 9 O -0.215 6.215 10 C -0.044 4.044 11 C 0.302 3.698 12 O -0.442 6.442 13 N -0.349 5.349 14 C 0.008 3.992 15 H 0.106 0.894 16 C -0.157 4.157 17 C -0.132 4.132 18 H 0.110 0.890 19 C 0.014 3.986 20 N -0.156 5.156 21 C -0.096 4.096 22 C -0.324 4.324 23 C -0.156 4.156 24 N -0.155 5.155 25 C -0.183 4.183 26 C -0.214 4.214 27 C -0.052 4.052 28 H 0.248 0.752 29 H 0.127 0.873 30 H -0.204 1.204 31 H -0.230 1.230 32 H 0.160 0.840 33 H 0.146 0.854 34 H 0.146 0.854 35 H 0.256 0.744 36 H 0.136 0.864 37 H 0.108 0.892 38 H 0.141 0.859 39 H 0.111 0.889 40 H 0.219 0.781 41 H 0.176 0.824 42 H 0.213 0.787 43 H 0.069 0.931 44 H 0.121 0.879 45 H 0.191 0.809 46 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -1.299 -4.568 -1.188 4.895 hybrid contribution -0.516 -0.674 -0.915 1.248 sum -1.815 -5.242 -2.103 5.933 Atomic orbital electron populations 1.86533 1.18157 1.80504 1.51320 1.24660 0.84195 1.10397 0.98347 0.94401 0.91011 0.73964 0.76823 1.19345 1.00874 0.94890 0.96308 1.20901 0.95975 0.99880 0.90934 1.21081 1.09548 0.93075 0.98265 1.96755 1.73212 1.73422 1.52865 1.18784 0.93742 0.90529 0.86862 1.86238 1.73393 1.23290 1.38584 1.22816 1.03899 0.80535 0.97182 1.20463 0.79480 0.82523 0.87368 1.90783 1.42477 1.58377 1.52564 1.45378 1.57411 1.08755 1.23368 1.21861 0.95184 0.95851 0.86297 0.89423 1.23304 0.99129 0.91548 1.01716 1.22823 0.97427 0.92345 1.00583 0.89008 1.22064 0.95404 0.91026 0.90057 1.48956 1.11455 1.42269 1.12906 1.23143 0.86766 0.98023 1.01643 1.21854 1.02928 1.11902 0.95709 1.24299 0.91515 0.98468 1.01314 1.77227 1.24869 1.19246 0.94152 1.23519 0.96690 0.95439 1.02610 1.21607 1.02666 1.02371 0.94791 1.21243 0.94227 0.93146 0.96570 0.75226 0.87322 1.20395 1.23042 0.83952 0.85361 0.85403 0.74399 0.86352 0.89179 0.85905 0.88916 0.78127 0.82441 0.78729 0.93054 0.87889 0.80919 0.82373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.13 12.81 -148.98 -1.91 -1.78 16 2 C -0.07 0.16 2.79 71.24 0.20 0.36 16 3 Si 0.73 -0.80 29.84 68.60 2.05 1.24 16 4 C -0.11 -0.10 5.39 -19.85 -0.11 -0.21 16 5 C -0.06 -0.23 8.40 22.27 0.19 -0.04 16 6 C -0.14 -0.98 6.24 22.40 0.14 -0.84 16 7 Br -0.05 -0.47 33.16 -20.37 -0.68 -1.15 16 8 C 0.15 0.64 6.68 22.52 0.15 0.79 16 9 O -0.30 -1.90 9.01 -73.60 -0.66 -2.56 16 10 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 11 C 0.52 1.51 7.91 87.66 0.69 2.21 16 12 O -0.56 -8.15 16.10 16.00 0.26 -7.89 16 13 N -0.70 2.64 5.26 -440.05 -2.32 0.32 16 14 C 0.11 -0.35 4.32 45.51 0.20 -0.15 16 15 H 0.09 0.15 7.46 -2.39 -0.02 0.13 16 16 C -0.12 1.05 7.39 31.12 0.23 1.28 16 17 C -0.11 0.70 3.74 -10.27 -0.04 0.66 16 18 H 0.09 -0.27 7.96 -2.38 -0.02 -0.29 16 19 C 0.13 -0.83 6.35 86.38 0.55 -0.29 16 20 N -0.37 -0.18 3.68 -348.07 -1.28 -1.46 16 21 C 0.05 -0.06 11.45 83.54 0.96 0.90 16 22 C -0.29 -0.31 10.80 21.99 0.24 -0.07 16 23 C 0.03 0.09 12.03 85.24 1.02 1.12 16 24 N -0.33 -1.84 12.27 -57.03 -0.70 -2.54 16 25 C -0.14 0.51 7.43 31.12 0.23 0.74 16 26 C -0.20 0.45 9.04 22.36 0.20 0.65 16 27 C -0.03 0.07 9.68 22.26 0.22 0.28 16 28 H 0.40 -3.17 8.74 -74.06 -0.65 -3.82 16 29 H 0.11 -0.86 7.96 -2.38 -0.02 -0.87 16 30 H -0.28 -0.61 7.11 99.48 0.71 0.10 16 31 H -0.30 -2.23 7.05 99.48 0.70 -1.53 16 32 H 0.14 0.37 4.86 -2.91 -0.01 0.35 16 33 H 0.13 -1.22 7.66 -2.39 -0.02 -1.24 16 34 H 0.13 -1.20 7.66 -2.39 -0.02 -1.22 16 35 H 0.42 -4.25 8.70 -92.71 -0.81 -5.05 16 36 H 0.12 -1.39 8.10 -2.39 -0.02 -1.41 16 37 H 0.09 -0.90 8.14 -2.39 -0.02 -0.92 16 38 H 0.12 -1.39 7.77 -2.39 -0.02 -1.41 16 39 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 40 H 0.20 -1.69 8.06 -2.91 -0.02 -1.71 16 41 H 0.16 -0.37 8.06 -2.91 -0.02 -0.40 16 42 H 0.20 -0.35 8.06 -2.91 -0.02 -0.37 16 43 H 0.05 0.06 8.14 -2.39 -0.02 0.05 16 44 H 0.10 -0.57 7.90 -2.38 -0.02 -0.58 16 45 H 0.17 -1.72 6.30 -2.91 -0.02 -1.74 16 46 H 0.16 -1.03 8.06 -2.91 -0.02 -1.06 16 Total: 0.00 -31.64 408.86 -0.18 -31.82 By element: Atomic # 1 Polarization: -23.28 SS G_CDS: -0.38 Total: -23.66 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: 5.44 Total: 7.65 kcal Atomic # 7 Polarization: 0.62 SS G_CDS: -4.30 Total: -3.68 kcal Atomic # 8 Polarization: -9.92 SS G_CDS: -2.31 Total: -12.23 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: 2.05 Total: 1.24 kcal Atomic # 35 Polarization: -0.47 SS G_CDS: -0.68 Total: -1.15 kcal Total: -31.64 -0.18 -31.82 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.971 kcal (2) G-P(sol) polarization free energy of solvation -31.640 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.819 kcal (6) G-S(sol) free energy of system = (1) + (5) 49.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds