Wall clock time and date at job start Sun Mar 7 2021 04:37:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46903 * 110.99856 * 2 1 4 4 C 1.50703 * 109.47347 * 293.95380 * 3 2 1 5 5 O 1.21286 * 119.99513 * 0.02562 * 4 3 2 6 6 N 1.34769 * 120.00205 * 179.97438 * 4 3 2 7 7 C 1.46501 * 120.00014 * 179.97438 * 6 4 3 8 8 H 1.09004 * 112.85074 * 336.20143 * 7 6 4 9 9 C 1.53782 * 113.61142 * 107.50467 * 7 6 4 10 10 C 1.53962 * 87.11063 * 89.18830 * 9 7 6 11 11 H 1.08993 * 113.61598 * 270.84305 * 10 9 7 12 12 C 1.52999 * 113.66529 * 139.88900 * 10 9 7 13 13 N 1.46494 * 109.47391 * 87.55384 * 12 10 9 14 14 C 1.34947 * 126.04306 * 124.71053 * 13 12 10 15 15 C 1.35310 * 107.74841 * 179.84183 * 14 13 12 16 16 C 1.39874 * 107.92204 * 0.42460 * 15 14 13 17 17 N 1.30838 * 108.19896 * 359.73699 * 16 15 14 18 18 C 1.53781 * 113.61619 * 205.00312 * 7 6 4 19 19 C 1.39677 * 111.00188 * 123.95253 * 2 1 3 20 20 C 1.38885 * 120.06966 * 115.77269 * 19 2 1 21 21 C 1.50700 * 120.04447 * 0.02562 * 20 19 2 22 22 O 1.42897 * 109.46768 * 75.00094 * 21 20 19 23 23 Si 1.86303 * 109.47244 * 195.00239 * 21 20 19 24 24 C 1.38136 * 119.91849 * 179.79455 * 20 19 2 25 25 C 1.38262 * 120.07604 * 0.48292 * 24 20 19 26 26 C 1.50696 * 119.92680 * 179.77315 * 25 24 20 27 27 F 1.39902 * 109.47332 * 179.97438 * 26 25 24 28 28 F 1.39902 * 109.46733 * 299.97294 * 26 25 24 29 29 F 1.39896 * 109.47287 * 59.97227 * 26 25 24 30 30 C 1.38312 * 120.14735 * 359.74571 * 25 24 20 31 31 C 1.38081 * 120.07406 * 0.02562 * 30 25 24 32 32 H 1.08996 * 109.47264 * 60.00152 * 1 2 3 33 33 H 1.09000 * 109.46817 * 179.97438 * 1 2 3 34 34 H 1.09000 * 109.47682 * 299.99757 * 1 2 3 35 35 H 1.08999 * 109.47271 * 173.95193 * 3 2 1 36 36 H 1.09003 * 109.47094 * 53.95267 * 3 2 1 37 37 H 0.97001 * 120.00013 * 0.02562 * 6 4 3 38 38 H 1.08997 * 113.61668 * 203.66381 * 9 7 6 39 39 H 1.08998 * 113.61674 * 334.48890 * 9 7 6 40 40 H 1.09002 * 109.47053 * 207.55709 * 12 10 9 41 41 H 1.09004 * 109.47121 * 327.55345 * 12 10 9 42 42 H 1.08000 * 126.12093 * 0.02562 * 14 13 12 43 43 H 1.07998 * 126.04127 * 180.16474 * 15 14 13 44 44 H 1.08001 * 125.89916 * 179.71490 * 16 15 14 45 45 H 1.09002 * 113.61445 * 25.43587 * 18 7 6 46 46 H 1.09002 * 113.61408 * 156.25317 * 18 7 6 47 47 H 1.08997 * 109.46860 * 315.00466 * 21 20 19 48 48 H 0.96698 * 114.00456 * 60.00548 * 22 21 20 49 49 H 1.48499 * 109.99640 * 179.97438 * 23 21 20 50 50 H 1.48501 * 109.99869 * 301.31859 * 23 21 20 51 51 H 1.07999 * 119.96269 * 180.23267 * 24 20 19 52 52 H 1.07997 * 119.96097 * 180.02562 * 30 25 24 53 53 H 1.08003 * 120.03128 * 179.97438 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6369 2.0472 -1.2985 5 8 1.0046 1.4456 -2.1407 6 7 2.0179 3.3202 -1.5233 7 6 1.6698 3.9769 -2.7858 8 1 1.4891 3.2695 -3.5951 9 6 0.5729 5.0451 -2.6425 10 6 1.7017 6.0558 -2.3688 11 1 1.9694 6.1366 -1.3153 12 6 1.4825 7.4162 -3.0336 13 7 0.6938 8.2728 -2.1447 14 6 1.0452 9.4999 -1.7068 15 6 0.0487 9.9557 -0.9130 16 6 -0.9415 8.9694 -0.8561 17 7 -0.5559 7.9602 -1.5941 18 6 2.6238 5.1206 -3.1688 19 6 1.9696 -0.7283 1.0817 20 6 2.7068 -1.8843 0.8607 21 6 2.9686 -2.3548 -0.5469 22 8 3.9666 -1.5273 -1.1478 23 14 3.5642 -4.1197 -0.5112 24 6 3.2040 -2.5999 1.9326 25 6 2.9600 -2.1718 3.2244 26 6 3.4997 -2.9578 4.3914 27 9 3.1267 -2.3336 5.5866 28 9 2.9782 -4.2556 4.3606 29 9 4.8952 -3.0139 4.3105 30 6 2.2221 -1.0236 3.4480 31 6 1.7261 -0.3010 2.3810 32 1 -0.3633 0.5138 -0.8900 33 1 -0.3633 -1.0277 -0.0005 34 1 -0.3634 0.5138 0.8900 35 1 3.0796 1.3445 0.1083 36 1 1.5610 1.9274 0.8309 37 1 2.5232 3.8014 -0.8495 38 1 0.0293 5.2396 -3.5670 39 1 -0.0865 4.8823 -1.7900 40 1 2.4471 7.8851 -3.2284 41 1 0.9487 7.2792 -3.9741 42 1 1.9571 10.0254 -1.9492 43 1 0.0243 10.9103 -0.4086 44 1 -1.8647 9.0303 -0.2990 45 1 3.6210 5.0194 -2.7404 46 1 2.6420 5.3346 -4.2374 47 1 2.0481 -2.2936 -1.1274 48 1 4.8145 -1.5329 -0.6828 49 1 3.8253 -4.5956 -1.8934 50 1 4.8013 -4.2218 0.3039 51 1 3.7807 -3.4969 1.7615 52 1 2.0336 -0.6918 4.4583 53 1 1.1497 0.5953 2.5564 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688104_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:47 Heat of formation + Delta-G solvation = -49.024802 kcal Electronic energy + Delta-G solvation = -41324.426117 eV Core-core repulsion = 35558.639255 eV Total energy + Delta-G solvation = -5765.786863 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.171 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -51.21985 -48.74472 -48.68364 -42.06699 -41.76149 -41.02977 -39.56717 -37.82796 -37.52830 -35.03822 -33.49034 -33.01882 -32.10901 -30.96001 -29.64735 -28.28581 -27.57016 -27.02458 -26.69973 -25.19839 -24.19805 -23.29725 -22.23062 -21.90531 -21.67276 -21.50367 -20.29396 -19.67246 -19.54191 -19.43638 -18.58618 -18.13761 -17.81185 -17.59097 -17.04284 -16.90875 -16.58416 -16.42431 -16.15119 -16.02009 -15.82629 -15.58770 -15.52830 -15.45324 -15.20506 -15.12180 -15.04520 -14.92255 -14.84212 -14.82412 -14.68463 -14.59692 -14.39503 -14.22529 -13.93362 -13.77245 -13.63435 -13.57549 -13.39484 -13.23885 -13.01855 -12.82843 -12.77333 -12.60775 -12.22978 -12.17788 -11.79586 -11.64767 -11.57655 -11.22653 -10.92284 -10.58187 -10.32664 -10.23157 -10.12803 -10.06185 -9.56775 -9.47453 -4.98451 -0.34820 0.00457 1.02478 1.25006 1.49535 1.57592 1.58251 1.68753 1.88739 1.92028 1.96798 2.18064 2.61800 2.74824 2.92659 3.33585 3.34391 3.43893 3.48351 3.59971 3.64268 3.66986 3.68442 3.80889 4.02104 4.02984 4.03761 4.08515 4.09908 4.19907 4.23108 4.28158 4.36262 4.44377 4.45818 4.48133 4.54871 4.63956 4.68770 4.74029 4.79081 4.84130 4.91353 4.92954 4.97291 5.00876 5.03940 5.05529 5.15948 5.17402 5.19712 5.39897 5.58053 5.64043 5.76995 6.15863 6.20370 6.51076 6.55651 6.80874 7.24260 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.498 5.498 3 C 0.047 3.953 4 C 0.517 3.483 5 O -0.559 6.559 6 N -0.704 5.704 7 C 0.115 3.885 8 H 0.082 0.918 9 C -0.134 4.134 10 C -0.107 4.107 11 H 0.090 0.910 12 C 0.134 3.866 13 N -0.375 5.375 14 C 0.052 3.948 15 C -0.293 4.293 16 C 0.025 3.975 17 N -0.330 5.330 18 C -0.119 4.119 19 C 0.143 3.857 20 C -0.095 4.095 21 C -0.056 4.056 22 O -0.532 6.532 23 Si 0.743 3.257 24 C -0.068 4.068 25 C -0.185 4.185 26 C 0.508 3.492 27 F -0.177 7.177 28 F -0.178 7.178 29 F -0.183 7.183 30 C -0.052 4.052 31 C -0.143 4.143 32 H 0.074 0.926 33 H 0.075 0.925 34 H 0.045 0.955 35 H 0.118 0.882 36 H 0.093 0.907 37 H 0.413 0.587 38 H 0.085 0.915 39 H 0.050 0.950 40 H 0.129 0.871 41 H 0.086 0.914 42 H 0.205 0.795 43 H 0.159 0.841 44 H 0.193 0.807 45 H 0.092 0.908 46 H 0.113 0.887 47 H 0.116 0.884 48 H 0.380 0.620 49 H -0.300 1.300 50 H -0.272 1.272 51 H 0.145 0.855 52 H 0.156 0.844 53 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.703 5.892 2.130 6.823 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.220 5.220 3 C -0.083 4.083 4 C 0.303 3.697 5 O -0.437 6.437 6 N -0.357 5.357 7 C 0.009 3.991 8 H 0.100 0.900 9 C -0.173 4.173 10 C -0.126 4.126 11 H 0.109 0.891 12 C 0.014 3.986 13 N -0.158 5.158 14 C -0.094 4.094 15 C -0.322 4.322 16 C -0.160 4.160 17 N -0.152 5.152 18 C -0.157 4.157 19 C 0.048 3.952 20 C -0.097 4.097 21 C -0.165 4.165 22 O -0.339 6.339 23 Si 0.648 3.352 24 C -0.087 4.087 25 C -0.187 4.187 26 C 0.454 3.546 27 F -0.158 7.158 28 F -0.159 7.159 29 F -0.164 7.164 30 C -0.070 4.070 31 C -0.163 4.163 32 H 0.092 0.908 33 H 0.093 0.907 34 H 0.063 0.937 35 H 0.136 0.864 36 H 0.111 0.889 37 H 0.250 0.750 38 H 0.104 0.896 39 H 0.069 0.931 40 H 0.147 0.853 41 H 0.105 0.895 42 H 0.222 0.778 43 H 0.177 0.823 44 H 0.210 0.790 45 H 0.111 0.889 46 H 0.131 0.869 47 H 0.133 0.867 48 H 0.229 0.771 49 H -0.228 1.228 50 H -0.198 1.198 51 H 0.162 0.838 52 H 0.174 0.826 53 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 2.356 3.531 -0.047 4.245 hybrid contribution 0.821 1.978 1.499 2.614 sum 3.177 5.508 1.453 6.523 Atomic orbital electron populations 1.22593 0.84360 1.03315 1.01919 1.59094 1.09415 1.12884 1.40559 1.22041 1.03195 0.88247 0.94778 1.20777 0.78435 0.81428 0.89020 1.90696 1.40502 1.64902 1.47574 1.45534 1.57540 1.13065 1.19512 1.21810 0.96950 0.93663 0.86714 0.90019 1.23369 0.96440 0.95548 1.01905 1.22772 0.97245 0.92400 1.00199 0.89141 1.22056 0.95517 0.89915 0.91118 1.48986 1.14769 1.14002 1.38036 1.23182 1.01608 0.87246 0.97408 1.21850 0.96607 1.03714 1.10053 1.24311 1.01158 0.91913 0.98625 1.77334 0.97156 1.24726 1.15962 1.23279 0.98059 0.92164 1.02211 1.18854 0.94291 0.93123 0.88887 1.20115 0.98737 0.95289 0.95525 1.24877 0.95938 1.04366 0.91351 1.86687 1.24518 1.67606 1.55128 0.94398 0.85133 0.76731 0.78893 1.20887 0.97690 0.99448 0.90634 1.19919 1.06700 0.99735 0.92318 1.18374 0.75498 0.77940 0.82793 1.93177 1.91191 1.82252 1.49221 1.93233 1.86473 1.39622 1.96607 1.93221 1.30462 1.96378 1.96361 1.21127 0.92974 0.91626 1.01298 1.21893 1.01079 1.01662 0.91689 0.90759 0.90658 0.93696 0.86359 0.88932 0.75033 0.89624 0.93118 0.85301 0.89534 0.77783 0.82346 0.79044 0.88922 0.86891 0.86655 0.77132 1.22817 1.19777 0.83765 0.82591 0.82802 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 8.94 127.69 1.14 1.16 16 2 N -0.50 -0.35 3.71 -724.45 -2.69 -3.04 16 3 C 0.05 -0.13 5.03 85.56 0.43 0.30 16 4 C 0.52 1.40 7.56 87.66 0.66 2.06 16 5 O -0.56 -6.73 13.91 -3.05 -0.04 -6.77 16 6 N -0.70 1.81 5.26 -440.03 -2.32 -0.51 16 7 C 0.11 -0.16 4.32 45.52 0.20 0.04 16 8 H 0.08 0.33 7.47 -2.38 -0.02 0.31 16 9 C -0.13 0.04 7.44 31.18 0.23 0.27 16 10 C -0.11 0.59 3.72 -10.20 -0.04 0.55 16 11 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 12 C 0.13 -0.77 6.35 86.38 0.55 -0.22 16 13 N -0.38 -0.26 3.68 -348.07 -1.28 -1.54 16 14 C 0.05 -0.09 11.45 83.54 0.96 0.86 16 15 C -0.29 -0.21 10.80 21.99 0.24 0.02 16 16 C 0.03 0.10 12.03 85.24 1.03 1.12 16 17 N -0.33 -2.14 12.42 -57.02 -0.71 -2.84 16 18 C -0.12 0.94 7.38 31.12 0.23 1.17 16 19 C 0.14 -0.20 4.65 38.21 0.18 -0.02 16 20 C -0.10 0.06 5.27 -19.73 -0.10 -0.04 16 21 C -0.06 -0.06 2.34 71.24 0.17 0.10 16 22 O -0.53 -1.82 12.88 -148.98 -1.92 -3.74 16 23 Si 0.74 -0.14 30.26 68.60 2.08 1.93 16 24 C -0.07 0.09 8.20 22.25 0.18 0.27 16 25 C -0.19 0.19 5.37 -19.84 -0.11 0.09 16 26 C 0.51 0.67 3.31 71.23 0.24 0.91 16 27 F -0.18 -0.28 15.97 44.97 0.72 0.43 16 28 F -0.18 -0.50 17.24 44.97 0.78 0.27 16 29 F -0.18 -0.63 17.23 44.97 0.78 0.15 16 30 C -0.05 0.20 9.42 22.25 0.21 0.41 16 31 C -0.14 0.68 8.70 22.40 0.19 0.87 16 32 H 0.07 0.46 5.88 -2.39 -0.01 0.45 16 33 H 0.07 0.04 8.12 -2.39 -0.02 0.02 16 34 H 0.04 -0.12 7.48 -2.39 -0.02 -0.14 16 35 H 0.12 -0.58 8.06 -2.39 -0.02 -0.60 16 36 H 0.09 -0.72 7.48 -2.39 -0.02 -0.73 16 37 H 0.41 -3.43 8.70 -92.71 -0.81 -4.24 16 38 H 0.09 0.06 7.90 -2.39 -0.02 0.04 16 39 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 40 H 0.13 -1.54 8.07 -2.39 -0.02 -1.56 16 41 H 0.09 -0.46 7.85 -2.38 -0.02 -0.48 16 42 H 0.21 -1.98 8.06 -2.91 -0.02 -2.01 16 43 H 0.16 -0.46 8.06 -2.91 -0.02 -0.48 16 44 H 0.19 -0.14 8.06 -2.91 -0.02 -0.16 16 45 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 46 H 0.11 -1.12 8.10 -2.39 -0.02 -1.14 16 47 H 0.12 0.40 7.78 -2.39 -0.02 0.38 16 48 H 0.38 -1.20 8.70 -74.06 -0.64 -1.85 16 49 H -0.30 -2.38 7.11 99.48 0.71 -1.68 16 50 H -0.27 -0.52 6.68 99.48 0.66 0.14 16 51 H 0.15 -0.33 4.87 -2.91 -0.01 -0.35 16 52 H 0.16 -1.06 7.15 -2.91 -0.02 -1.08 16 53 H 0.15 -1.33 7.16 -2.91 -0.02 -1.36 16 Total: 0.00 -24.86 447.98 1.50 -23.36 By element: Atomic # 1 Polarization: -17.19 SS G_CDS: -0.47 Total: -17.65 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: 6.58 Total: 9.94 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -7.00 Total: -7.93 kcal Atomic # 8 Polarization: -8.55 SS G_CDS: -1.96 Total: -10.51 kcal Atomic # 9 Polarization: -1.41 SS G_CDS: 2.27 Total: 0.86 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: 2.08 Total: 1.93 kcal Total: -24.86 1.50 -23.36 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.662 kcal (2) G-P(sol) polarization free energy of solvation -24.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.362 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.025 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds