Wall clock time and date at job start Sun Mar 7 2021 04:37:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35960 * 116.99702 * 2 1 4 4 C 1.39443 * 120.12083 * 179.97438 * 3 2 1 5 5 O 1.34782 * 133.24636 * 359.97438 * 4 3 2 6 6 C 1.34929 * 110.84521 * 179.97438 * 5 4 3 7 7 C 1.46995 * 125.13841 * 180.02562 * 6 5 4 8 8 O 1.21649 * 119.99425 * 179.97438 * 7 6 5 9 9 N 1.34774 * 119.99790 * 359.95621 * 7 6 5 10 10 C 1.46508 * 119.99602 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.84845 * 23.80662 * 10 9 7 12 12 C 1.53775 * 113.61094 * 155.00243 * 10 9 7 13 13 C 1.53777 * 87.08496 * 89.11717 * 12 10 9 14 14 H 1.08998 * 113.61314 * 270.88807 * 13 12 10 15 15 C 1.52995 * 113.62005 * 139.97511 * 13 12 10 16 16 N 1.46498 * 109.47623 * 175.00420 * 15 13 12 17 17 C 1.34943 * 126.04341 * 125.00126 * 16 15 13 18 18 C 1.35311 * 107.75217 * 179.97438 * 17 16 15 19 19 C 1.39871 * 107.91692 * 359.97438 * 18 17 16 20 20 N 1.30837 * 108.20175 * 359.74013 * 19 18 17 21 21 C 1.53772 * 113.61406 * 252.49949 * 10 9 7 22 22 C 1.35809 * 109.72028 * 359.97438 * 6 5 4 23 23 C 1.40605 * 119.13880 * 179.97438 * 4 3 2 24 24 C 1.39783 * 120.12294 * 0.02681 * 23 4 3 25 25 C 1.50690 * 120.09649 * 180.02562 * 24 23 4 26 26 O 1.42897 * 109.47312 * 284.97152 * 25 24 23 27 27 Si 1.86300 * 109.47062 * 164.97187 * 25 24 23 28 28 C 1.36635 * 119.80651 * 359.97438 * 24 23 4 29 29 C 1.38267 * 120.12074 * 0.27649 * 3 2 1 30 30 H 1.08994 * 109.47045 * 299.99589 * 1 2 3 31 31 H 1.09001 * 109.47450 * 59.99633 * 1 2 3 32 32 H 1.09001 * 109.47087 * 179.97438 * 1 2 3 33 33 H 0.97001 * 120.00561 * 0.02562 * 9 7 6 34 34 H 1.09004 * 113.61593 * 203.66665 * 12 10 9 35 35 H 1.09003 * 113.61811 * 334.56839 * 12 10 9 36 36 H 1.08998 * 109.47315 * 295.00700 * 15 13 12 37 37 H 1.09010 * 109.46930 * 55.00349 * 15 13 12 38 38 H 1.08003 * 126.12090 * 359.95888 * 17 16 15 39 39 H 1.07996 * 126.04525 * 180.02562 * 18 17 16 40 40 H 1.07999 * 125.90105 * 179.97438 * 19 18 17 41 41 H 1.09002 * 113.62062 * 25.43412 * 21 10 9 42 42 H 1.08998 * 113.61338 * 156.33666 * 21 10 9 43 43 H 1.07993 * 126.95859 * 180.02562 * 22 6 5 44 44 H 1.08999 * 109.47246 * 44.97360 * 25 24 23 45 45 H 0.96698 * 114.00177 * 300.00048 * 26 25 24 46 46 H 1.48500 * 110.00170 * 58.68156 * 27 25 24 47 47 H 1.48506 * 110.00351 * 179.97438 * 27 25 24 48 48 H 1.08002 * 119.74788 * 179.97438 * 28 24 23 49 49 H 1.07992 * 119.66420 * 359.97438 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4142 0.3574 0.0016 6 6 5.6318 0.9389 0.0011 7 6 6.9132 0.2187 0.0014 8 8 7.9596 0.8392 0.0005 9 7 6.9288 -1.1290 0.0031 10 6 8.2060 -1.8467 0.0028 11 1 9.0255 -1.2524 0.4068 12 6 8.1178 -3.2610 0.6001 13 6 7.7800 -3.7534 -0.8170 14 1 6.7134 -3.7405 -1.0410 15 6 8.4491 -5.0804 -1.1806 16 7 7.9747 -5.5227 -2.4942 17 6 8.7489 -5.8268 -3.5569 18 6 7.9316 -6.1902 -4.5722 19 6 6.6127 -6.1060 -4.1141 20 7 6.6376 -5.7117 -2.8668 21 6 8.5342 -2.5195 -1.3404 22 6 5.4944 2.2900 -0.0008 23 6 4.0553 2.5510 0.0000 24 6 3.2765 3.7118 -0.0005 25 6 3.9380 5.0657 -0.0017 26 8 4.4603 5.3418 1.2994 27 14 2.6863 6.3680 -0.4576 28 6 1.9135 3.6151 -0.0010 29 6 1.2956 2.3726 0.0058 30 1 -0.3633 0.5137 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3633 -1.0277 -0.0005 33 1 6.0944 -1.6237 0.0037 34 1 9.0694 -3.6358 0.9773 35 1 7.3012 -3.3845 1.3114 36 1 9.5303 -4.9458 -1.2112 37 1 8.1974 -5.8314 -0.4316 38 1 9.8276 -5.7869 -3.5909 39 1 8.2426 -6.4928 -5.5611 40 1 5.7269 -6.3315 -4.6893 41 1 8.0537 -2.0445 -2.1957 42 1 9.5995 -2.6916 -1.4937 43 1 6.2873 3.0232 -0.0019 44 1 4.7504 5.0725 -0.7283 45 1 3.7916 5.3516 1.9978 46 1 1.5577 6.3477 0.5073 47 1 3.3261 7.7082 -0.4617 48 1 1.3127 4.5126 -0.0010 49 1 0.2174 2.3120 0.0099 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:37:57 Heat of formation + Delta-G solvation = 51.126710 kcal Electronic energy + Delta-G solvation = -34611.319260 eV Core-core repulsion = 29896.459323 eV Total energy + Delta-G solvation = -4714.859938 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.156 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.66378 -42.06673 -41.28482 -40.63113 -39.42324 -39.11791 -37.09077 -35.16622 -33.56267 -33.50815 -31.91051 -31.04928 -30.86663 -28.91177 -28.42714 -26.90248 -26.38616 -25.45289 -23.96336 -23.93221 -22.17808 -21.93256 -21.68532 -21.58848 -20.25816 -19.83717 -19.01778 -18.60492 -18.18201 -17.82456 -17.68079 -17.21698 -17.01310 -16.67025 -16.47145 -16.21652 -16.14978 -15.88600 -15.64702 -15.47677 -15.30540 -14.75165 -14.64364 -14.59130 -14.47797 -14.29016 -14.09426 -13.95451 -13.65748 -13.56768 -13.46003 -13.44259 -13.32845 -12.91130 -12.62294 -12.34799 -12.34502 -12.13939 -11.75994 -11.68003 -11.55574 -11.45066 -11.40556 -10.94213 -10.61419 -10.30886 -10.22565 -9.77071 -9.43884 -8.99175 -5.00159 -0.58975 0.12141 0.70900 1.03992 1.20989 1.29494 1.51907 1.60384 1.90078 1.91678 2.02307 2.03736 2.05360 2.40407 3.20062 3.24685 3.35021 3.36190 3.42222 3.50792 3.60696 3.63852 3.83349 3.86863 3.88128 3.97232 4.00002 4.07009 4.09369 4.09809 4.18085 4.30841 4.36961 4.45852 4.46974 4.47674 4.51238 4.53108 4.65038 4.68268 4.83416 4.87485 4.88608 4.89520 4.94163 5.02579 5.07172 5.17462 5.23135 5.29975 5.39889 5.63930 5.79816 6.12967 6.15479 6.31835 6.38897 6.84706 6.91579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.606 3.394 8 O -0.507 6.507 9 N -0.700 5.700 10 C 0.120 3.880 11 H 0.111 0.889 12 C -0.137 4.137 13 C -0.125 4.125 14 H 0.106 0.894 15 C 0.143 3.857 16 N -0.370 5.370 17 C 0.052 3.948 18 C -0.275 4.275 19 C 0.044 3.956 20 N -0.296 5.296 21 C -0.146 4.146 22 C -0.102 4.102 23 C -0.082 4.082 24 C -0.095 4.095 25 C -0.074 4.074 26 O -0.525 6.525 27 Si 0.692 3.308 28 C -0.096 4.096 29 C -0.178 4.178 30 H 0.060 0.940 31 H 0.061 0.939 32 H 0.106 0.894 33 H 0.409 0.591 34 H 0.103 0.897 35 H 0.081 0.919 36 H 0.098 0.902 37 H 0.087 0.913 38 H 0.172 0.828 39 H 0.147 0.853 40 H 0.182 0.818 41 H 0.074 0.926 42 H 0.095 0.905 43 H 0.175 0.825 44 H 0.119 0.881 45 H 0.375 0.625 46 H -0.258 1.258 47 H -0.255 1.255 48 H 0.140 0.860 49 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.091 -1.744 -1.170 3.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.075 4.075 7 C 0.392 3.608 8 O -0.384 6.384 9 N -0.351 5.351 10 C 0.015 3.985 11 H 0.129 0.871 12 C -0.175 4.175 13 C -0.144 4.144 14 H 0.124 0.876 15 C 0.022 3.978 16 N -0.153 5.153 17 C -0.094 4.094 18 C -0.305 4.305 19 C -0.142 4.142 20 N -0.117 5.117 21 C -0.184 4.184 22 C -0.123 4.123 23 C -0.083 4.083 24 C -0.096 4.096 25 C -0.183 4.183 26 O -0.331 6.331 27 Si 0.593 3.407 28 C -0.114 4.114 29 C -0.197 4.197 30 H 0.078 0.922 31 H 0.080 0.920 32 H 0.124 0.876 33 H 0.245 0.755 34 H 0.121 0.879 35 H 0.100 0.900 36 H 0.117 0.883 37 H 0.105 0.895 38 H 0.189 0.811 39 H 0.164 0.836 40 H 0.199 0.801 41 H 0.093 0.907 42 H 0.114 0.886 43 H 0.192 0.808 44 H 0.136 0.864 45 H 0.223 0.777 46 H -0.183 1.183 47 H -0.180 1.180 48 H 0.158 0.842 49 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -2.781 -0.715 -0.075 2.872 hybrid contribution -0.090 -0.667 0.344 0.756 sum -2.870 -1.382 0.270 3.197 Atomic orbital electron populations 1.23194 0.77290 1.04791 1.01784 1.86182 1.22181 1.25657 1.88323 1.17752 0.86506 0.85908 0.99327 1.18780 0.87456 0.86959 1.06989 1.84058 1.12648 1.34727 1.76092 1.21923 0.83863 0.92588 1.09130 1.16592 0.85479 0.82016 0.76744 1.90920 1.30332 1.67389 1.49723 1.45563 1.09805 1.05609 1.74114 1.21865 0.86557 0.92726 0.97341 0.87055 1.23353 1.03750 0.94330 0.96089 1.22994 1.01639 0.92995 0.96736 0.87611 1.21778 0.98806 0.96287 0.80951 1.48711 1.04280 1.51526 1.10751 1.22588 0.98270 1.00620 0.87917 1.21551 0.92539 1.15055 1.01324 1.23921 0.98507 0.99230 0.92587 1.77330 0.96502 1.22762 1.15149 1.23528 1.01167 0.95890 0.97837 1.22749 0.94793 0.94275 1.00460 1.19404 0.92594 0.92052 1.04237 1.19400 0.92813 0.94314 1.03034 1.25028 1.06858 0.97937 0.88493 1.86638 1.37586 1.92626 1.16281 0.94882 0.77542 0.77870 0.90411 1.20589 0.93481 0.97805 0.99491 1.20970 1.00370 0.90521 1.07792 0.92158 0.92003 0.87616 0.75474 0.87879 0.89996 0.88347 0.89488 0.81064 0.83565 0.80103 0.90748 0.88640 0.80777 0.86351 0.77711 1.18313 1.17967 0.84232 0.83479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.54 10.50 -19.62 -0.21 -0.74 16 3 C 0.15 0.29 6.70 -39.12 -0.26 0.03 16 4 C 0.05 0.16 7.35 -38.24 -0.28 -0.12 16 5 O -0.17 -0.64 10.28 2.64 0.03 -0.61 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.61 2.05 7.80 -12.71 -0.10 1.95 16 8 O -0.51 -3.06 16.42 5.23 0.09 -2.98 16 9 N -0.70 -0.53 5.26 -54.23 -0.29 -0.82 16 10 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 11 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 12 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 13 C -0.12 0.19 3.74 -89.81 -0.34 -0.14 16 14 H 0.11 0.05 7.97 -51.93 -0.41 -0.37 16 15 C 0.14 -0.25 6.34 -4.05 -0.03 -0.27 16 16 N -0.37 -0.48 3.68 -61.37 -0.23 -0.70 16 17 C 0.05 0.02 11.45 -17.23 -0.20 -0.18 16 18 C -0.28 -0.32 10.80 -40.01 -0.43 -0.75 16 19 C 0.04 0.09 12.03 -17.36 -0.21 -0.11 16 20 N -0.30 -1.07 12.28 30.62 0.38 -0.69 16 21 C -0.15 0.15 7.43 -25.92 -0.19 -0.05 16 22 C -0.10 -0.32 10.68 -37.23 -0.40 -0.72 16 23 C -0.08 -0.22 6.16 -105.20 -0.65 -0.87 16 24 C -0.09 -0.08 5.26 -104.63 -0.55 -0.63 16 25 C -0.07 -0.01 2.70 36.00 0.10 0.09 16 26 O -0.53 -0.80 12.88 -35.23 -0.45 -1.26 16 27 Si 0.69 -0.94 30.25 -169.99 -5.14 -6.08 16 28 C -0.10 0.06 8.62 -39.96 -0.34 -0.29 16 29 C -0.18 0.08 9.03 -39.37 -0.36 -0.27 16 30 H 0.06 -0.22 7.65 -51.93 -0.40 -0.61 16 31 H 0.06 -0.23 7.67 -51.93 -0.40 -0.63 16 32 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 33 H 0.41 -0.12 8.42 -40.82 -0.34 -0.47 16 34 H 0.10 -0.44 8.10 -51.93 -0.42 -0.86 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 36 H 0.10 -0.40 7.77 -51.93 -0.40 -0.81 16 37 H 0.09 -0.18 8.14 -51.92 -0.42 -0.60 16 38 H 0.17 -0.49 8.06 -52.48 -0.42 -0.91 16 39 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 40 H 0.18 -0.07 8.06 -52.49 -0.42 -0.50 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 42 H 0.10 -0.22 7.90 -51.93 -0.41 -0.63 16 43 H 0.17 0.43 8.06 -52.49 -0.42 0.00 16 44 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 45 H 0.38 -0.54 8.70 45.56 0.40 -0.15 16 46 H -0.26 0.05 6.69 56.52 0.38 0.42 16 47 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 48 H 0.14 -0.36 4.81 -52.49 -0.25 -0.61 16 49 H 0.15 -0.47 6.26 -52.49 -0.33 -0.80 16 LS Contribution 415.51 15.07 6.26 6.26 Total: 0.00 -10.36 415.51 -9.92 -20.29 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -6.38 Total: -10.74 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -3.99 Total: -1.93 kcal Atomic # 7 Polarization: -2.07 SS G_CDS: -0.13 Total: -2.21 kcal Atomic # 8 Polarization: -5.04 SS G_CDS: -0.55 Total: -5.59 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.14 Total: -6.08 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -10.36 -9.92 -20.29 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.412 kcal (2) G-P(sol) polarization free energy of solvation -10.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 61.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.923 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.285 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.127 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds