Wall clock time and date at job start Sun Mar 7 2021 04:38:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33820 * 122.44577 * 2 1 4 4 C 1.50694 * 124.52207 * 0.02562 * 3 2 1 5 5 O 1.42896 * 109.47383 * 30.00101 * 4 3 2 6 6 Si 1.86302 * 109.47236 * 150.00098 * 4 3 2 7 7 S 1.70617 * 110.95113 * 179.70409 * 3 2 1 8 8 C 1.75823 * 91.56441 * 0.35444 * 7 3 2 9 9 C 1.46586 * 125.45833 * 179.91045 * 8 7 3 10 10 O 1.21700 * 120.00013 * 179.41624 * 9 8 7 11 11 N 1.34777 * 119.99915 * 359.69930 * 9 8 7 12 12 C 1.46496 * 119.99867 * 180.02562 * 11 9 8 13 13 H 1.08997 * 112.85620 * 23.80053 * 12 11 9 14 14 C 1.53784 * 113.61603 * 154.99941 * 12 11 9 15 15 C 1.53784 * 87.08379 * 89.11232 * 14 12 11 16 16 H 1.09000 * 113.61065 * 270.80460 * 15 14 12 17 17 C 1.52999 * 113.61325 * 139.97982 * 15 14 12 18 18 N 1.46493 * 109.46917 * 175.00079 * 17 15 14 19 19 C 1.34949 * 126.03904 * 124.72164 * 18 17 15 20 20 C 1.35318 * 107.74764 * 179.84209 * 19 18 17 21 21 C 1.39868 * 107.92196 * 0.41590 * 20 19 18 22 22 N 1.30838 * 108.20323 * 359.74398 * 21 20 19 23 23 C 1.53780 * 87.08002 * 25.43506 * 15 14 12 24 24 C 1.36648 * 109.08756 * 359.65000 * 8 7 3 25 25 H 1.09002 * 109.46747 * 269.99531 * 1 2 3 26 26 H 1.08997 * 109.47589 * 29.99736 * 1 2 3 27 27 H 1.08998 * 109.46887 * 150.00036 * 1 2 3 28 28 H 1.09003 * 109.47480 * 270.00057 * 4 3 2 29 29 H 0.96701 * 114.00028 * 179.97438 * 5 4 3 30 30 H 1.48508 * 109.99690 * 300.00106 * 6 4 3 31 31 H 1.48503 * 110.00199 * 61.31461 * 6 4 3 32 32 H 0.96999 * 120.00047 * 359.97438 * 11 9 8 33 33 H 1.08997 * 113.61773 * 203.66290 * 14 12 11 34 34 H 1.09007 * 113.60878 * 334.56245 * 14 12 11 35 35 H 1.08996 * 109.47595 * 295.00535 * 17 15 14 36 36 H 1.09004 * 109.46794 * 55.00894 * 17 15 14 37 37 H 1.07999 * 126.12577 * 359.97438 * 19 18 17 38 38 H 1.07997 * 126.04047 * 180.16462 * 20 19 18 39 39 H 1.07997 * 125.90227 * 179.76227 * 21 20 19 40 40 H 1.08998 * 113.61586 * 220.02055 * 23 15 14 41 41 H 1.09002 * 113.61686 * 89.11237 * 23 15 14 42 42 H 1.07996 * 123.35640 * 180.24314 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6354 2.5161 0.0006 5 8 0.3755 2.4979 0.6747 6 14 2.7926 3.6826 0.8786 7 16 3.8969 0.7893 0.0082 8 6 3.5938 -0.9426 0.0008 9 6 4.6232 -1.9861 0.0013 10 8 4.3003 -3.1594 0.0065 11 7 5.9274 -1.6460 0.0017 12 6 6.9562 -2.6889 0.0015 13 1 6.5995 -3.6356 -0.4041 14 6 8.2981 -2.2304 -0.5935 15 6 8.6824 -1.7768 0.8247 16 1 8.3900 -0.7510 1.0492 17 6 10.1385 -2.0731 1.1895 18 7 10.4387 -1.5007 2.5041 19 6 10.9298 -2.1700 3.5681 20 6 11.0685 -1.2861 4.5832 21 6 10.6389 -0.0357 4.1270 22 7 10.2610 -0.1631 2.8808 23 6 7.6904 -2.8301 1.3455 24 6 2.2447 -1.1601 0.0005 25 1 -0.3633 -0.0001 1.0277 26 1 -0.3634 0.8900 -0.5138 27 1 -0.3633 -0.8900 -0.5138 28 1 1.4928 2.8508 -1.0270 29 1 -0.0622 3.3593 0.7135 30 1 2.9952 3.2373 2.2808 31 1 4.0961 3.7348 0.1690 32 1 6.1848 -0.7108 0.0012 33 1 8.9108 -3.0490 -0.9712 34 1 8.2028 -1.4091 -1.3039 35 1 10.2935 -3.1515 1.2187 36 1 10.7974 -1.6313 0.4419 37 1 11.1710 -3.2221 3.6024 38 1 11.4411 -1.5078 5.5724 39 1 10.6221 0.8773 4.7035 40 1 7.1045 -2.4930 2.2005 41 1 8.1369 -3.8128 1.4979 42 1 1.8020 -2.1451 0.0002 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:01 Heat of formation + Delta-G solvation = 76.447396 kcal Electronic energy + Delta-G solvation = -25554.862491 eV Core-core repulsion = 21824.069453 eV Total energy + Delta-G solvation = -3730.793039 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.114 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.09489 -41.31181 -40.08508 -39.20425 -37.42828 -35.10995 -33.56218 -32.16541 -30.97222 -30.21628 -28.73525 -26.92293 -26.57577 -24.67533 -23.89761 -22.11935 -21.87753 -21.63385 -20.36822 -19.98202 -19.23123 -18.48944 -18.19431 -17.34349 -17.13013 -16.50525 -16.29772 -16.21519 -15.87837 -15.57543 -15.30414 -14.92596 -14.72921 -14.52670 -14.41720 -14.37297 -14.30244 -13.96883 -13.67481 -13.58761 -13.17773 -13.09579 -12.94580 -12.84166 -12.53470 -12.35721 -12.19043 -11.95243 -11.76317 -11.57879 -11.44783 -11.12789 -10.71519 -10.30914 -10.20605 -9.69329 -9.46564 -9.41202 -5.30252 -0.63993 0.27050 0.65558 1.01099 1.02105 1.35103 1.46845 1.57688 1.82840 1.92712 1.99551 2.14574 3.15969 3.23110 3.32852 3.38145 3.59899 3.62512 3.71754 3.85971 3.94955 4.03895 4.11316 4.24458 4.28326 4.34547 4.38857 4.49669 4.51096 4.58860 4.63563 4.67199 4.82847 4.87016 4.88987 4.92753 4.93596 5.01879 5.05487 5.14916 5.40625 5.42575 5.50072 5.77053 6.10272 6.29989 6.44082 6.81670 7.05544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C -0.084 4.084 3 C -0.196 4.196 4 C -0.032 4.032 5 O -0.536 6.536 6 Si 0.669 3.331 7 S 0.182 5.818 8 C -0.263 4.263 9 C 0.597 3.403 10 O -0.522 6.522 11 N -0.711 5.711 12 C 0.123 3.877 13 H 0.111 0.889 14 C -0.137 4.137 15 C -0.125 4.125 16 H 0.104 0.896 17 C 0.143 3.857 18 N -0.370 5.370 19 C 0.053 3.947 20 C -0.275 4.275 21 C 0.044 3.956 22 N -0.297 5.297 23 C -0.146 4.146 24 C -0.043 4.043 25 H 0.074 0.926 26 H 0.081 0.919 27 H 0.060 0.940 28 H 0.085 0.915 29 H 0.384 0.616 30 H -0.241 1.241 31 H -0.238 1.238 32 H 0.399 0.601 33 H 0.103 0.897 34 H 0.080 0.920 35 H 0.099 0.901 36 H 0.087 0.913 37 H 0.172 0.828 38 H 0.147 0.853 39 H 0.182 0.818 40 H 0.073 0.927 41 H 0.095 0.905 42 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.491 3.802 -1.360 4.067 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.097 4.097 3 C -0.315 4.315 4 C -0.145 4.145 5 O -0.343 6.343 6 Si 0.567 3.433 7 S 0.450 5.550 8 C -0.383 4.383 9 C 0.384 3.616 10 O -0.399 6.399 11 N -0.362 5.362 12 C 0.018 3.982 13 H 0.129 0.871 14 C -0.176 4.176 15 C -0.144 4.144 16 H 0.122 0.878 17 C 0.022 3.978 18 N -0.153 5.153 19 C -0.093 4.093 20 C -0.305 4.305 21 C -0.142 4.142 22 N -0.119 5.119 23 C -0.185 4.185 24 C -0.077 4.077 25 H 0.092 0.908 26 H 0.099 0.901 27 H 0.079 0.921 28 H 0.103 0.897 29 H 0.233 0.767 30 H -0.164 1.164 31 H -0.162 1.162 32 H 0.233 0.767 33 H 0.121 0.879 34 H 0.099 0.901 35 H 0.117 0.883 36 H 0.105 0.895 37 H 0.190 0.810 38 H 0.165 0.835 39 H 0.199 0.801 40 H 0.091 0.909 41 H 0.113 0.887 42 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 2.032 3.830 -2.031 4.788 hybrid contribution -0.836 -1.213 0.571 1.580 sum 1.195 2.617 -1.461 3.227 Atomic orbital electron populations 1.20526 0.88228 1.02653 1.02989 1.18743 0.98775 0.90218 1.01952 1.23241 0.97927 0.98863 1.11428 1.23961 0.92961 0.96177 1.01383 1.86571 1.32531 1.36277 1.78921 0.95058 0.79674 0.87135 0.81389 1.83022 1.03101 0.99177 1.69713 1.24563 0.98025 0.96609 1.19097 1.16898 0.81457 0.87404 0.75842 1.90855 1.81503 1.18063 1.49489 1.45521 1.05075 1.09769 1.75819 1.21807 0.86934 0.92376 0.97116 0.87137 1.23363 0.95827 1.02404 0.95985 1.22990 0.93503 1.01081 0.96817 0.87789 1.21781 0.96664 0.98466 0.80902 1.48714 1.49484 1.06464 1.10614 1.22596 0.99691 0.99210 0.87843 1.21556 1.14484 0.93076 1.01359 1.23918 0.98451 0.99194 0.92641 1.77319 1.24144 0.95261 1.15156 1.23532 0.97579 0.99404 0.97973 1.20770 0.90838 1.00224 0.95827 0.90751 0.90053 0.92125 0.89714 0.76747 1.16441 1.16242 0.76657 0.87876 0.90115 0.88321 0.89456 0.81038 0.83537 0.80097 0.90865 0.88676 0.82445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.09 8.70 36.01 0.31 0.22 16 2 C -0.08 -0.22 5.75 -106.45 -0.61 -0.83 16 3 C -0.20 -0.38 5.57 -35.86 -0.20 -0.58 16 4 C -0.03 0.03 2.75 36.00 0.10 0.13 16 5 O -0.54 0.76 9.81 -35.23 -0.35 0.42 16 6 Si 0.67 -1.00 31.30 -169.99 -5.32 -6.32 16 7 S 0.18 0.30 19.78 -107.50 -2.13 -1.82 16 8 C -0.26 -0.88 6.45 -36.79 -0.24 -1.11 16 9 C 0.60 2.47 7.78 -12.89 -0.10 2.37 16 10 O -0.52 -3.81 16.44 5.19 0.09 -3.73 16 11 N -0.71 -0.94 5.26 -54.35 -0.29 -1.22 16 12 C 0.12 0.01 4.32 -67.11 -0.29 -0.28 16 13 H 0.11 0.13 7.47 -51.93 -0.39 -0.25 16 14 C -0.14 0.33 7.39 -25.92 -0.19 0.14 16 15 C -0.12 0.16 3.74 -89.81 -0.34 -0.18 16 16 H 0.10 0.06 7.96 -51.93 -0.41 -0.35 16 17 C 0.14 -0.22 6.35 -4.05 -0.03 -0.24 16 18 N -0.37 -0.54 3.68 -61.37 -0.23 -0.76 16 19 C 0.05 0.03 11.45 -17.22 -0.20 -0.17 16 20 C -0.28 -0.36 10.80 -40.01 -0.43 -0.79 16 21 C 0.04 0.10 12.03 -17.37 -0.21 -0.11 16 22 N -0.30 -1.09 12.27 30.62 0.38 -0.72 16 23 C -0.15 0.06 7.43 -25.91 -0.19 -0.13 16 24 C -0.04 -0.14 9.80 -40.43 -0.40 -0.54 16 25 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 26 H 0.08 0.05 6.42 -51.93 -0.33 -0.29 16 27 H 0.06 0.02 8.13 -51.93 -0.42 -0.41 16 28 H 0.09 -0.22 7.96 -51.93 -0.41 -0.64 16 29 H 0.38 -2.43 8.74 45.56 0.40 -2.03 16 30 H -0.24 -0.54 7.11 56.52 0.40 -0.14 16 31 H -0.24 -0.08 7.11 56.52 0.40 0.33 16 32 H 0.40 -0.07 7.81 -40.82 -0.32 -0.38 16 33 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 34 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 35 H 0.10 -0.38 7.77 -51.93 -0.40 -0.78 16 36 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.17 -0.46 8.06 -52.49 -0.42 -0.88 16 38 H 0.15 -0.07 8.06 -52.49 -0.42 -0.49 16 39 H 0.18 -0.06 8.06 -52.49 -0.42 -0.48 16 40 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 41 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 42 H 0.16 0.43 8.06 -52.49 -0.42 0.01 16 LS Contribution 366.12 15.07 5.52 5.52 Total: 0.00 -9.73 366.12 -11.04 -20.77 By element: Atomic # 1 Polarization: -4.32 SS G_CDS: -5.70 Total: -10.03 kcal Atomic # 6 Polarization: 0.90 SS G_CDS: -3.01 Total: -2.11 kcal Atomic # 7 Polarization: -2.57 SS G_CDS: -0.14 Total: -2.70 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.26 Total: -3.31 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.32 Total: -6.32 kcal Atomic # 16 Polarization: 0.30 SS G_CDS: -2.13 Total: -1.82 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -9.73 -11.04 -20.77 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.218 kcal (2) G-P(sol) polarization free energy of solvation -9.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 87.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.039 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.770 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds