Wall clock time and date at job start Sun Mar 7 2021 04:38:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50691 * 1 3 3 C 1.37934 * 120.07779 * 2 1 4 4 C 1.38383 * 120.14479 * 179.75103 * 3 2 1 5 5 C 1.50702 * 119.85251 * 180.29621 * 4 3 2 6 6 C 1.38330 * 120.29570 * 0.54532 * 4 3 2 7 7 C 1.50699 * 119.93287 * 179.72558 * 6 4 3 8 8 O 1.42899 * 109.47023 * 284.73377 * 7 6 4 9 9 Si 1.86298 * 109.47384 * 164.72911 * 7 6 4 10 10 C 1.37986 * 120.14104 * 359.45400 * 6 4 3 11 11 C 1.39552 * 119.85404 * 0.27351 * 10 6 4 12 12 C 1.47846 * 120.14390 * 179.97438 * 11 10 6 13 13 O 1.21552 * 119.99747 * 173.74722 * 12 11 10 14 14 N 1.34776 * 120.00048 * 353.74745 * 12 11 10 15 15 C 1.46495 * 119.99855 * 179.97438 * 14 12 11 16 16 H 1.09005 * 112.85330 * 336.20201 * 15 14 12 17 17 C 1.53776 * 113.61374 * 107.50420 * 15 14 12 18 18 C 1.53783 * 87.08331 * 89.11715 * 17 15 14 19 19 H 1.08994 * 113.61334 * 270.88841 * 18 17 15 20 20 C 1.53001 * 113.69528 * 139.99213 * 18 17 15 21 21 N 1.46497 * 109.47082 * 87.46764 * 20 18 17 22 22 C 1.34946 * 126.03973 * 125.00178 * 21 20 18 23 23 C 1.35317 * 107.74556 * 179.97438 * 22 21 20 24 24 C 1.39863 * 107.92175 * 359.97438 * 23 22 21 25 25 N 1.30841 * 108.20546 * 359.73924 * 24 23 22 26 26 C 1.53787 * 87.08078 * 25.43319 * 18 17 15 27 27 H 1.09001 * 109.47045 * 263.39218 * 1 2 3 28 28 H 1.08999 * 109.47130 * 23.38703 * 1 2 3 29 29 H 1.09003 * 109.47660 * 143.38552 * 1 2 3 30 30 H 1.07996 * 119.92758 * 0.02562 * 3 2 1 31 31 H 1.09001 * 109.47030 * 270.24786 * 5 4 3 32 32 H 1.08999 * 109.47512 * 30.25202 * 5 4 3 33 33 H 1.08995 * 109.47347 * 150.25167 * 5 4 3 34 34 H 1.09002 * 109.46596 * 44.72569 * 7 6 4 35 35 H 0.96698 * 114.00510 * 59.99053 * 8 7 6 36 36 H 1.48498 * 109.99917 * 178.68520 * 9 7 6 37 37 H 1.48503 * 109.99862 * 299.99915 * 9 7 6 38 38 H 1.08006 * 120.06901 * 180.25016 * 10 6 4 39 39 H 0.96998 * 120.00127 * 0.02562 * 14 12 11 40 40 H 1.09003 * 113.62060 * 203.66040 * 17 15 14 41 41 H 1.09002 * 113.61843 * 334.56923 * 17 15 14 42 42 H 1.09000 * 109.46936 * 207.46780 * 20 18 17 43 43 H 1.09000 * 109.46839 * 327.46305 * 20 18 17 44 44 H 1.07995 * 126.12411 * 359.95774 * 22 21 20 45 45 H 1.07999 * 126.03666 * 180.02562 * 23 22 21 46 46 H 1.08001 * 125.90162 * 179.97438 * 24 23 22 47 47 H 1.08992 * 113.61701 * 220.02563 * 26 18 17 48 48 H 1.09003 * 113.69075 * 89.12516 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5820 1.1952 0.0052 5 6 4.3306 2.5032 0.0119 6 6 4.2813 0.0017 -0.0009 7 6 5.7882 0.0130 -0.0015 8 8 6.2614 0.3657 -1.3029 9 14 6.4222 -1.6789 0.4526 10 6 3.6019 -1.1993 -0.0009 11 6 2.2064 -1.2081 -0.0005 12 6 1.4720 -2.4913 -0.0010 13 8 0.2620 -2.4990 0.1140 14 7 2.1442 -3.6524 -0.1291 15 6 1.4166 -4.9238 -0.1291 16 1 0.4520 -4.8596 0.3746 17 6 1.3482 -5.5945 -1.5112 18 6 2.6715 -6.2907 -1.1518 19 1 3.5559 -5.7183 -1.4313 20 6 2.7409 -7.7505 -1.6045 21 7 3.2449 -7.8122 -2.9786 22 6 4.3087 -8.5259 -3.4029 23 6 4.4425 -8.3157 -4.7329 24 6 3.4254 -7.4441 -5.1354 25 7 2.7032 -7.1463 -4.0857 26 6 2.2689 -6.1215 0.3228 27 1 -0.3633 -0.1183 1.0208 28 1 -0.3633 0.9432 -0.4079 29 1 -0.3634 -0.8249 -0.6129 30 1 1.6583 2.1289 0.0004 31 1 4.5111 2.8238 -1.0141 32 1 3.7388 3.2579 0.5297 33 1 5.2835 2.3738 0.5250 34 1 6.1462 0.7424 0.7252 35 1 5.9694 1.2366 -1.6051 36 1 7.9069 -1.6892 0.4247 37 1 5.9370 -2.0572 1.8042 38 1 4.1491 -2.1306 -0.0016 39 1 3.1099 -3.6463 -0.2205 40 1 0.5095 -6.2817 -1.6222 41 1 1.4351 -4.8936 -2.3415 42 1 3.4113 -8.3035 -0.9464 43 1 1.7451 -8.1917 -1.5624 44 1 4.9403 -9.1523 -2.7905 45 1 5.2004 -8.7456 -5.3710 46 1 3.2617 -7.0826 -6.1398 47 1 3.0990 -5.8459 0.9732 48 1 1.6819 -6.9521 0.7146 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:15 Heat of formation + Delta-G solvation = 64.218295 kcal Electronic energy + Delta-G solvation = -29686.008853 eV Core-core repulsion = 25709.995655 eV Total energy + Delta-G solvation = -3976.013198 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.173 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.06606 -41.71845 -40.66507 -39.30034 -37.60189 -35.26260 -34.35164 -33.90206 -32.87269 -30.90367 -29.47892 -28.82469 -28.21690 -26.78387 -25.61272 -24.44287 -23.76666 -22.62273 -21.88193 -21.58241 -20.99661 -20.29803 -18.94260 -18.31540 -18.10902 -17.21081 -16.70286 -16.56424 -16.37075 -16.20159 -16.03014 -15.73453 -15.34605 -15.13211 -14.93962 -14.87217 -14.64262 -14.54219 -14.35835 -14.10011 -13.93611 -13.69708 -13.58273 -13.50924 -13.44396 -12.98568 -12.89808 -12.78348 -12.71839 -12.57956 -12.22825 -12.08547 -11.67229 -11.51468 -11.39555 -11.28660 -11.24945 -10.57039 -10.25493 -10.10710 -9.91717 -9.61801 -9.43138 -5.04159 -0.26114 0.16023 1.06242 1.27843 1.51885 1.62951 1.79213 1.89681 2.03653 2.04670 2.66450 3.24345 3.36381 3.42212 3.49951 3.55065 3.59804 3.70640 3.73670 3.76615 3.96703 3.98275 3.99900 4.07264 4.10718 4.28104 4.29355 4.35238 4.41228 4.42413 4.48542 4.57343 4.65155 4.66651 4.72812 4.77036 4.83151 4.88875 4.92438 4.93697 4.98509 5.05118 5.08153 5.11973 5.19301 5.26973 5.37952 5.52295 5.60422 5.77871 5.82315 6.15013 6.41343 6.44104 6.87968 7.20408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.010 4.010 3 C -0.128 4.128 4 C -0.043 4.043 5 C -0.130 4.130 6 C -0.131 4.131 7 C -0.080 4.080 8 O -0.533 6.533 9 Si 0.733 3.267 10 C -0.066 4.066 11 C -0.142 4.142 12 C 0.564 3.436 13 O -0.524 6.524 14 N -0.711 5.711 15 C 0.119 3.881 16 H 0.108 0.892 17 C -0.133 4.133 18 C -0.123 4.123 19 H 0.096 0.904 20 C 0.142 3.858 21 N -0.372 5.372 22 C 0.050 3.950 23 C -0.275 4.275 24 C 0.041 3.959 25 N -0.289 5.289 26 C -0.139 4.139 27 H 0.078 0.922 28 H 0.060 0.940 29 H 0.097 0.903 30 H 0.133 0.867 31 H 0.080 0.920 32 H 0.076 0.924 33 H 0.071 0.929 34 H 0.077 0.923 35 H 0.363 0.637 36 H -0.251 1.251 37 H -0.247 1.247 38 H 0.127 0.873 39 H 0.399 0.601 40 H 0.092 0.908 41 H 0.077 0.923 42 H 0.098 0.902 43 H 0.087 0.913 44 H 0.172 0.828 45 H 0.146 0.854 46 H 0.181 0.819 47 H 0.079 0.921 48 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.880 -1.200 1.222 3.350 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.011 4.011 3 C -0.146 4.146 4 C -0.043 4.043 5 C -0.186 4.186 6 C -0.131 4.131 7 C -0.188 4.188 8 O -0.338 6.338 9 Si 0.631 3.369 10 C -0.084 4.084 11 C -0.145 4.145 12 C 0.352 3.648 13 O -0.401 6.401 14 N -0.362 5.362 15 C 0.014 3.986 16 H 0.126 0.874 17 C -0.172 4.172 18 C -0.142 4.142 19 H 0.115 0.885 20 C 0.021 3.979 21 N -0.154 5.154 22 C -0.096 4.096 23 C -0.304 4.304 24 C -0.145 4.145 25 N -0.110 5.110 26 C -0.177 4.177 27 H 0.096 0.904 28 H 0.079 0.921 29 H 0.116 0.884 30 H 0.151 0.849 31 H 0.099 0.901 32 H 0.095 0.905 33 H 0.090 0.910 34 H 0.094 0.906 35 H 0.211 0.789 36 H -0.176 1.176 37 H -0.172 1.172 38 H 0.144 0.856 39 H 0.235 0.765 40 H 0.111 0.889 41 H 0.096 0.904 42 H 0.116 0.884 43 H 0.105 0.895 44 H 0.189 0.811 45 H 0.164 0.836 46 H 0.198 0.802 47 H 0.098 0.902 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 1.703 -1.608 2.509 3.432 hybrid contribution 1.157 1.206 -0.095 1.674 sum 2.860 -0.402 2.414 3.764 Atomic orbital electron populations 1.21126 0.89548 1.03409 1.03900 1.20094 0.97092 0.91204 0.92702 1.21000 0.93205 0.97935 1.02418 1.19971 0.93800 0.94844 0.95672 1.21003 1.00475 0.94011 1.03135 1.20000 0.96095 0.92941 1.04058 1.25459 0.92089 1.12855 0.88430 1.86794 1.75445 1.39969 1.31634 0.93118 0.80836 0.80359 0.82550 1.20955 0.92998 0.96937 0.97484 1.19648 0.92984 0.93327 1.08544 1.18188 0.87097 0.83468 0.76009 1.90752 1.13524 1.86906 1.48941 1.45588 1.10615 1.05250 1.74758 1.21850 0.96856 0.82087 0.97842 0.87414 1.23399 0.96759 0.99600 0.97432 1.22921 0.99910 0.95039 0.96305 0.88536 1.21782 1.01087 0.97796 0.77259 1.48743 1.22725 1.36196 1.07761 1.22595 0.92294 0.98269 0.96467 1.21549 1.05442 1.08462 0.94951 1.23941 0.94270 0.97839 0.98433 1.77406 1.21930 1.18872 0.92798 1.23371 1.00486 0.98350 0.95542 0.90355 0.92109 0.88435 0.84872 0.90133 0.90533 0.91010 0.90604 0.78871 1.17587 1.17172 0.85588 0.76535 0.88905 0.90442 0.88424 0.89502 0.81098 0.83625 0.80171 0.90241 0.88070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.23 8.73 36.00 0.31 0.09 16 2 C -0.01 -0.02 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.07 9.31 -39.64 -0.37 -0.44 16 4 C -0.04 0.00 5.87 -104.53 -0.61 -0.61 16 5 C -0.13 0.29 8.74 36.01 0.31 0.61 16 6 C -0.13 -0.05 5.26 -104.68 -0.55 -0.60 16 7 C -0.08 0.01 2.09 36.01 0.08 0.09 16 8 O -0.53 -0.24 12.65 -35.23 -0.45 -0.68 16 9 Si 0.73 -0.46 30.16 -169.99 -5.13 -5.59 16 10 C -0.07 -0.02 8.13 -39.18 -0.32 -0.34 16 11 C -0.14 -0.26 5.87 -104.97 -0.62 -0.88 16 12 C 0.56 1.40 7.70 -12.33 -0.09 1.30 16 13 O -0.52 -2.74 12.95 5.32 0.07 -2.67 16 14 N -0.71 0.20 5.21 -53.96 -0.28 -0.08 16 15 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 16 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 17 C -0.13 0.07 7.43 -25.92 -0.19 -0.12 16 18 C -0.12 0.29 3.70 -89.80 -0.33 -0.04 16 19 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 20 C 0.14 -0.32 6.35 -4.04 -0.03 -0.35 16 21 N -0.37 -0.26 3.68 -61.37 -0.23 -0.49 16 22 C 0.05 -0.01 11.45 -17.22 -0.20 -0.21 16 23 C -0.27 -0.20 10.80 -40.02 -0.43 -0.63 16 24 C 0.04 0.07 12.02 -17.37 -0.21 -0.13 16 25 N -0.29 -0.89 12.43 30.62 0.38 -0.51 16 26 C -0.14 0.48 7.39 -25.91 -0.19 0.29 16 27 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 28 H 0.06 0.02 8.04 -51.93 -0.42 -0.40 16 29 H 0.10 0.35 5.86 -51.93 -0.30 0.04 16 30 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 31 H 0.08 -0.27 7.78 -51.93 -0.40 -0.68 16 32 H 0.08 -0.21 8.08 -51.93 -0.42 -0.63 16 33 H 0.07 -0.18 6.21 -51.93 -0.32 -0.50 16 34 H 0.08 -0.07 6.46 -51.93 -0.34 -0.40 16 35 H 0.36 -0.78 7.74 45.56 0.35 -0.43 16 36 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 37 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 38 H 0.13 -0.27 3.52 -52.48 -0.18 -0.46 16 39 H 0.40 -0.99 6.77 -40.82 -0.28 -1.26 16 40 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 41 H 0.08 0.14 8.14 -51.93 -0.42 -0.29 16 42 H 0.10 -0.45 8.07 -51.93 -0.42 -0.87 16 43 H 0.09 -0.21 7.85 -51.93 -0.41 -0.62 16 44 H 0.17 -0.59 8.06 -52.49 -0.42 -1.01 16 45 H 0.15 -0.14 8.06 -52.49 -0.42 -0.56 16 46 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 48 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 LS Contribution 387.05 15.07 5.83 5.83 Total: 0.00 -8.43 387.05 -11.08 -19.51 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -6.94 Total: -12.31 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: -4.35 Total: -3.01 kcal Atomic # 7 Polarization: -0.95 SS G_CDS: -0.13 Total: -1.08 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.38 Total: -3.36 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.13 Total: -5.59 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -8.43 -11.08 -19.51 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.728 kcal (2) G-P(sol) polarization free energy of solvation -8.428 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.300 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.509 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds