Wall clock time and date at job start Sun Mar 7 2021 04:38:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50691 * 1 3 3 C 1.37934 * 120.07779 * 2 1 4 4 C 1.38383 * 120.14479 * 179.75103 * 3 2 1 5 5 C 1.50702 * 119.85251 * 180.29621 * 4 3 2 6 6 C 1.38330 * 120.29570 * 0.54532 * 4 3 2 7 7 C 1.50699 * 119.93287 * 179.72558 * 6 4 3 8 8 O 1.42899 * 109.47023 * 284.73377 * 7 6 4 9 9 Si 1.86298 * 109.47384 * 164.72911 * 7 6 4 10 10 C 1.37986 * 120.14104 * 359.45400 * 6 4 3 11 11 C 1.39552 * 119.85404 * 0.27351 * 10 6 4 12 12 C 1.47846 * 120.14390 * 179.97438 * 11 10 6 13 13 O 1.21552 * 119.99747 * 173.74722 * 12 11 10 14 14 N 1.34776 * 120.00048 * 353.74745 * 12 11 10 15 15 C 1.46495 * 119.99855 * 179.97438 * 14 12 11 16 16 H 1.09005 * 112.85330 * 336.20201 * 15 14 12 17 17 C 1.53776 * 113.61374 * 107.50420 * 15 14 12 18 18 C 1.53783 * 87.08331 * 89.11715 * 17 15 14 19 19 H 1.08994 * 113.61334 * 270.88841 * 18 17 15 20 20 C 1.53001 * 113.69528 * 139.99213 * 18 17 15 21 21 N 1.46497 * 109.47082 * 87.46764 * 20 18 17 22 22 C 1.34946 * 126.03973 * 125.00178 * 21 20 18 23 23 C 1.35317 * 107.74556 * 179.97438 * 22 21 20 24 24 C 1.39863 * 107.92175 * 359.97438 * 23 22 21 25 25 N 1.30841 * 108.20546 * 359.73924 * 24 23 22 26 26 C 1.53787 * 87.08078 * 25.43319 * 18 17 15 27 27 H 1.09001 * 109.47045 * 263.39218 * 1 2 3 28 28 H 1.08999 * 109.47130 * 23.38703 * 1 2 3 29 29 H 1.09003 * 109.47660 * 143.38552 * 1 2 3 30 30 H 1.07996 * 119.92758 * 0.02562 * 3 2 1 31 31 H 1.09001 * 109.47030 * 270.24786 * 5 4 3 32 32 H 1.08999 * 109.47512 * 30.25202 * 5 4 3 33 33 H 1.08995 * 109.47347 * 150.25167 * 5 4 3 34 34 H 1.09002 * 109.46596 * 44.72569 * 7 6 4 35 35 H 0.96698 * 114.00510 * 59.99053 * 8 7 6 36 36 H 1.48498 * 109.99917 * 178.68520 * 9 7 6 37 37 H 1.48503 * 109.99862 * 299.99915 * 9 7 6 38 38 H 1.08006 * 120.06901 * 180.25016 * 10 6 4 39 39 H 0.96998 * 120.00127 * 0.02562 * 14 12 11 40 40 H 1.09003 * 113.62060 * 203.66040 * 17 15 14 41 41 H 1.09002 * 113.61843 * 334.56923 * 17 15 14 42 42 H 1.09000 * 109.46936 * 207.46780 * 20 18 17 43 43 H 1.09000 * 109.46839 * 327.46305 * 20 18 17 44 44 H 1.07995 * 126.12411 * 359.95774 * 22 21 20 45 45 H 1.07999 * 126.03666 * 180.02562 * 23 22 21 46 46 H 1.08001 * 125.90162 * 179.97438 * 24 23 22 47 47 H 1.08992 * 113.61701 * 220.02563 * 26 18 17 48 48 H 1.09003 * 113.69075 * 89.12516 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5820 1.1952 0.0052 5 6 4.3306 2.5032 0.0119 6 6 4.2813 0.0017 -0.0009 7 6 5.7882 0.0130 -0.0015 8 8 6.2614 0.3657 -1.3029 9 14 6.4222 -1.6789 0.4526 10 6 3.6019 -1.1993 -0.0009 11 6 2.2064 -1.2081 -0.0005 12 6 1.4720 -2.4913 -0.0010 13 8 0.2620 -2.4990 0.1140 14 7 2.1442 -3.6524 -0.1291 15 6 1.4166 -4.9238 -0.1291 16 1 0.4520 -4.8596 0.3746 17 6 1.3482 -5.5945 -1.5112 18 6 2.6715 -6.2907 -1.1518 19 1 3.5559 -5.7183 -1.4313 20 6 2.7409 -7.7505 -1.6045 21 7 3.2449 -7.8122 -2.9786 22 6 4.3087 -8.5259 -3.4029 23 6 4.4425 -8.3157 -4.7329 24 6 3.4254 -7.4441 -5.1354 25 7 2.7032 -7.1463 -4.0857 26 6 2.2689 -6.1215 0.3228 27 1 -0.3633 -0.1183 1.0208 28 1 -0.3633 0.9432 -0.4079 29 1 -0.3634 -0.8249 -0.6129 30 1 1.6583 2.1289 0.0004 31 1 4.5111 2.8238 -1.0141 32 1 3.7388 3.2579 0.5297 33 1 5.2835 2.3738 0.5250 34 1 6.1462 0.7424 0.7252 35 1 5.9694 1.2366 -1.6051 36 1 7.9069 -1.6892 0.4247 37 1 5.9370 -2.0572 1.8042 38 1 4.1491 -2.1306 -0.0016 39 1 3.1099 -3.6463 -0.2205 40 1 0.5095 -6.2817 -1.6222 41 1 1.4351 -4.8936 -2.3415 42 1 3.4113 -8.3035 -0.9464 43 1 1.7451 -8.1917 -1.5624 44 1 4.9403 -9.1523 -2.7905 45 1 5.2004 -8.7456 -5.3710 46 1 3.2617 -7.0826 -6.1398 47 1 3.0990 -5.8459 0.9732 48 1 1.6819 -6.9521 0.7146 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688104_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:14 Heat of formation + Delta-G solvation = 67.184625 kcal Electronic energy + Delta-G solvation = -29685.880223 eV Core-core repulsion = 25709.995655 eV Total energy + Delta-G solvation = -3975.884568 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.173 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.05429 -41.76359 -40.63630 -39.35020 -37.61810 -35.30721 -34.36653 -33.88659 -32.87088 -30.89664 -29.50503 -28.80384 -28.14059 -26.66155 -25.64049 -24.39742 -23.75332 -22.65338 -21.84959 -21.58094 -21.03708 -20.23753 -18.96950 -18.31799 -18.05228 -17.22081 -16.70479 -16.51114 -16.42837 -16.20535 -16.04509 -15.71982 -15.34391 -15.08822 -14.93983 -14.79759 -14.66073 -14.55352 -14.33652 -14.15828 -13.88156 -13.63217 -13.50727 -13.44536 -13.34696 -13.01019 -12.84153 -12.77032 -12.70091 -12.58408 -12.16555 -12.10237 -11.61744 -11.52227 -11.38479 -11.24201 -11.18008 -10.73333 -10.27779 -10.17379 -9.92762 -9.65811 -9.42099 -5.00567 -0.31505 0.12756 1.08027 1.30813 1.53678 1.69100 1.74655 1.89612 2.01336 2.01888 2.59925 3.39298 3.41860 3.49541 3.51426 3.59880 3.73228 3.74746 3.79864 3.83890 4.03790 4.07751 4.08211 4.15098 4.29277 4.33868 4.41323 4.45646 4.49482 4.52449 4.62606 4.67513 4.70327 4.76258 4.78967 4.82425 4.84502 4.89280 4.98008 5.00857 5.04169 5.08157 5.10498 5.16360 5.22212 5.23469 5.38758 5.45672 5.59757 5.75489 5.81759 6.26392 6.41340 6.56449 6.86200 7.10823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.028 4.028 3 C -0.133 4.133 4 C -0.042 4.042 5 C -0.130 4.130 6 C -0.138 4.138 7 C -0.084 4.084 8 O -0.545 6.545 9 Si 0.787 3.213 10 C -0.066 4.066 11 C -0.159 4.159 12 C 0.558 3.442 13 O -0.561 6.561 14 N -0.699 5.699 15 C 0.110 3.890 16 H 0.089 0.911 17 C -0.136 4.136 18 C -0.111 4.111 19 H 0.093 0.907 20 C 0.135 3.865 21 N -0.375 5.375 22 C 0.054 3.946 23 C -0.294 4.294 24 C 0.025 3.975 25 N -0.330 5.330 26 C -0.118 4.118 27 H 0.070 0.930 28 H 0.075 0.925 29 H 0.076 0.924 30 H 0.149 0.851 31 H 0.095 0.905 32 H 0.083 0.917 33 H 0.076 0.924 34 H 0.086 0.914 35 H 0.375 0.625 36 H -0.291 1.291 37 H -0.260 1.260 38 H 0.146 0.854 39 H 0.410 0.590 40 H 0.089 0.911 41 H 0.048 0.952 42 H 0.131 0.869 43 H 0.087 0.913 44 H 0.207 0.793 45 H 0.158 0.842 46 H 0.191 0.809 47 H 0.095 0.905 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.540 -1.572 2.037 5.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.029 4.029 3 C -0.151 4.151 4 C -0.043 4.043 5 C -0.186 4.186 6 C -0.138 4.138 7 C -0.192 4.192 8 O -0.352 6.352 9 Si 0.689 3.311 10 C -0.084 4.084 11 C -0.162 4.162 12 C 0.347 3.653 13 O -0.441 6.441 14 N -0.351 5.351 15 C 0.005 3.995 16 H 0.108 0.892 17 C -0.175 4.175 18 C -0.131 4.131 19 H 0.111 0.889 20 C 0.015 3.985 21 N -0.157 5.157 22 C -0.093 4.093 23 C -0.323 4.323 24 C -0.161 4.161 25 N -0.152 5.152 26 C -0.156 4.156 27 H 0.089 0.911 28 H 0.093 0.907 29 H 0.094 0.906 30 H 0.167 0.833 31 H 0.113 0.887 32 H 0.102 0.898 33 H 0.095 0.905 34 H 0.103 0.897 35 H 0.225 0.775 36 H -0.218 1.218 37 H -0.185 1.185 38 H 0.163 0.837 39 H 0.248 0.752 40 H 0.108 0.892 41 H 0.067 0.933 42 H 0.149 0.851 43 H 0.105 0.895 44 H 0.223 0.777 45 H 0.176 0.824 46 H 0.208 0.792 47 H 0.114 0.886 48 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 3.369 -1.983 3.313 5.124 hybrid contribution 0.675 1.347 -0.368 1.551 sum 4.045 -0.636 2.944 5.043 Atomic orbital electron populations 1.21013 0.90064 1.03239 1.03072 1.20244 0.97046 0.92007 0.93599 1.21198 0.93681 0.97997 1.02201 1.20271 0.93737 0.95845 0.94424 1.21075 1.00458 0.92868 1.04224 1.20158 0.96462 0.93108 1.04075 1.25547 0.91637 1.13473 0.88564 1.86754 1.75629 1.41024 1.31840 0.92428 0.77738 0.79691 0.81258 1.21158 0.92442 0.98023 0.96762 1.19710 0.93711 0.93008 1.09732 1.18429 0.86808 0.84388 0.75657 1.90731 1.15018 1.87459 1.50918 1.45527 1.11169 1.04841 1.73541 1.21938 0.96984 0.82754 0.97831 0.89245 1.23364 0.98230 0.99382 0.96477 1.22804 0.98349 0.95006 0.96894 0.88865 1.22060 1.02074 0.97918 0.76477 1.48991 1.22811 1.35812 1.08125 1.23178 0.91874 0.97627 0.96603 1.21839 1.05764 1.08791 0.95896 1.24285 0.94678 0.98227 0.98880 1.77343 1.23384 1.20560 0.93948 1.23311 1.00323 0.97030 0.94948 0.91130 0.90653 0.90570 0.83327 0.88696 0.89835 0.90480 0.89660 0.77538 1.21799 1.18519 0.83657 0.75189 0.89208 0.93309 0.85086 0.89479 0.77676 0.82420 0.79228 0.88617 0.86367 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.67 8.73 71.23 0.62 -0.05 16 2 C -0.03 -0.14 5.91 -19.61 -0.12 -0.26 16 3 C -0.13 -0.16 9.31 22.23 0.21 0.05 16 4 C -0.04 0.02 5.87 -19.81 -0.12 -0.09 16 5 C -0.13 0.77 8.74 71.24 0.62 1.40 16 6 C -0.14 -0.03 5.26 -19.90 -0.10 -0.14 16 7 C -0.08 0.10 2.09 71.24 0.15 0.25 16 8 O -0.55 0.02 12.65 -148.98 -1.89 -1.87 16 9 Si 0.79 -1.34 30.16 68.60 2.07 0.73 16 10 C -0.07 -0.05 8.13 22.53 0.18 0.14 16 11 C -0.16 -0.78 5.87 -20.09 -0.12 -0.90 16 12 C 0.56 3.86 7.70 86.79 0.67 4.53 16 13 O -0.56 -7.53 12.95 -3.88 -0.05 -7.58 16 14 N -0.70 -0.35 5.21 -442.91 -2.31 -2.65 16 15 C 0.11 -0.07 4.32 45.52 0.20 0.13 16 16 H 0.09 0.30 7.46 -2.38 -0.02 0.28 16 17 C -0.14 -0.07 7.43 31.12 0.23 0.16 16 18 C -0.11 0.57 3.70 -10.26 -0.04 0.53 16 19 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 20 C 0.13 -0.77 6.35 86.38 0.55 -0.22 16 21 N -0.37 -0.39 3.68 -348.07 -1.28 -1.67 16 22 C 0.05 -0.08 11.45 83.54 0.96 0.87 16 23 C -0.29 -0.39 10.80 21.99 0.24 -0.16 16 24 C 0.02 0.11 12.02 85.23 1.02 1.14 16 25 N -0.33 -2.40 12.43 -57.03 -0.71 -3.11 16 26 C -0.12 0.95 7.39 31.12 0.23 1.18 16 27 H 0.07 0.47 8.14 -2.39 -0.02 0.45 16 28 H 0.07 0.13 8.04 -2.39 -0.02 0.12 16 29 H 0.08 0.78 5.86 -2.39 -0.01 0.77 16 30 H 0.15 -0.41 8.06 -2.91 -0.02 -0.43 16 31 H 0.09 -0.81 7.78 -2.39 -0.02 -0.83 16 32 H 0.08 -0.58 8.08 -2.39 -0.02 -0.60 16 33 H 0.08 -0.51 6.21 -2.39 -0.01 -0.53 16 34 H 0.09 -0.26 6.46 -2.39 -0.02 -0.27 16 35 H 0.38 -2.06 7.74 -74.06 -0.57 -2.63 16 36 H -0.29 -1.45 7.11 99.48 0.71 -0.74 16 37 H -0.26 -0.11 7.11 99.48 0.71 0.60 16 38 H 0.15 -0.68 3.52 -2.91 -0.01 -0.69 16 39 H 0.41 -1.96 6.77 -92.71 -0.63 -2.59 16 40 H 0.09 0.07 7.90 -2.39 -0.02 0.05 16 41 H 0.05 0.31 8.14 -2.39 -0.02 0.29 16 42 H 0.13 -1.62 8.07 -2.39 -0.02 -1.64 16 43 H 0.09 -0.48 7.85 -2.39 -0.02 -0.50 16 44 H 0.21 -1.98 8.06 -2.91 -0.02 -2.00 16 45 H 0.16 -0.35 8.06 -2.91 -0.02 -0.38 16 46 H 0.19 0.08 8.06 -2.91 -0.02 0.06 16 47 H 0.10 -1.00 8.14 -2.39 -0.02 -1.02 16 48 H 0.12 -1.28 8.10 -2.39 -0.02 -1.30 16 Total: 0.00 -22.60 387.05 1.06 -21.54 By element: Atomic # 1 Polarization: -13.77 SS G_CDS: -0.16 Total: -13.93 kcal Atomic # 6 Polarization: 3.16 SS G_CDS: 5.38 Total: 8.54 kcal Atomic # 7 Polarization: -3.14 SS G_CDS: -4.30 Total: -7.43 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -1.94 Total: -9.45 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: 2.07 Total: 0.73 kcal Total: -22.60 1.06 -21.54 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.723 kcal (2) G-P(sol) polarization free energy of solvation -22.595 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.538 kcal (6) G-S(sol) free energy of system = (1) + (5) 67.185 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds