Wall clock time and date at job start Sun Mar 7 2021 04:38:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47364 * 2 1 4 4 C 1.50700 * 109.47420 * 239.99792 * 2 1 3 5 5 C 1.34236 * 126.49994 * 105.31474 * 4 2 1 6 6 N 1.36837 * 109.93779 * 180.13785 * 5 4 2 7 7 C 1.46492 * 125.06239 * 179.85138 * 6 5 4 8 8 C 1.50703 * 109.47441 * 264.69467 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.09000 * 112.84813 * 334.38493 * 11 10 8 13 13 C 1.53783 * 113.61758 * 105.58441 * 11 10 8 14 14 C 1.54050 * 86.98283 * 89.15928 * 13 11 10 15 15 H 1.09002 * 113.61571 * 270.88625 * 14 13 11 16 16 C 1.53006 * 113.69400 * 139.99266 * 14 13 11 17 17 N 1.46500 * 109.47036 * 87.46545 * 16 14 13 18 18 C 1.34950 * 126.03567 * 124.99999 * 17 16 14 19 19 C 1.35317 * 107.74507 * 179.97438 * 18 17 16 20 20 C 1.39866 * 107.92160 * 0.02562 * 19 18 17 21 21 N 1.30846 * 108.20023 * 359.73687 * 20 19 18 22 22 C 1.53775 * 87.07915 * 25.43148 * 14 13 11 23 23 C 1.37691 * 109.87191 * 359.58450 * 6 5 4 24 24 C 1.39089 * 133.51397 * 180.26147 * 23 6 5 25 25 C 1.37786 * 119.78006 * 179.97438 * 24 23 6 26 26 C 1.38793 * 120.66633 * 0.02562 * 25 24 23 27 27 C 1.36664 * 120.52585 * 0.02562 * 26 25 24 28 28 C 1.39587 * 119.76505 * 359.97438 * 27 26 25 29 29 H 0.96705 * 114.00149 * 300.00332 * 1 2 3 30 30 H 1.08999 * 109.46825 * 120.00029 * 2 1 3 31 31 H 1.48494 * 110.00102 * 178.67853 * 3 2 1 32 32 H 1.48502 * 109.99610 * 300.00066 * 3 2 1 33 33 H 1.08001 * 125.03396 * 359.97438 * 5 4 2 34 34 H 1.08998 * 109.47276 * 144.69383 * 7 6 5 35 35 H 1.09002 * 109.47526 * 24.69695 * 7 6 5 36 36 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 37 37 H 1.08997 * 113.61462 * 203.66215 * 13 11 10 38 38 H 1.09001 * 113.61141 * 334.56616 * 13 11 10 39 39 H 1.09000 * 109.47239 * 207.46589 * 16 14 13 40 40 H 1.08997 * 109.46976 * 327.46283 * 16 14 13 41 41 H 1.08000 * 126.12491 * 359.95683 * 18 17 16 42 42 H 1.07999 * 126.03830 * 180.02562 * 19 18 17 43 43 H 1.07997 * 125.90305 * 180.02562 * 20 19 18 44 44 H 1.09000 * 113.62018 * 220.01830 * 22 14 13 45 45 H 1.09007 * 113.61161 * 89.11936 * 22 14 13 46 46 H 1.08000 * 120.10507 * 359.96101 * 24 23 6 47 47 H 1.07998 * 119.66822 * 179.97438 * 25 24 23 48 48 H 1.07991 * 119.73566 * 179.97438 * 26 25 24 49 49 H 1.08003 * 120.11499 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4663 -0.1380 -2.3204 6 7 2.8036 -1.0991 -3.2342 7 6 3.4092 -0.8406 -4.5428 8 6 2.3304 -0.7843 -5.5935 9 8 1.1698 -0.9449 -5.2800 10 7 2.6552 -0.5566 -6.8815 11 6 1.6058 -0.4959 -7.9019 12 1 0.7151 -1.0609 -7.6271 13 6 1.3040 0.9305 -8.3912 14 6 2.3980 0.7102 -9.4532 15 1 3.3955 0.9948 -9.1181 16 6 2.0462 1.2851 -10.8268 17 7 2.4642 2.6878 -10.8906 18 6 3.2743 3.2332 -11.8220 19 6 3.4132 4.5470 -11.5294 20 6 2.6628 4.8136 -10.3796 21 7 2.0892 3.7009 -9.9989 22 6 2.1107 -0.7949 -9.3233 23 6 2.4944 -2.3458 -2.7380 24 6 2.6298 -3.6364 -3.2387 25 6 2.2161 -4.7109 -2.4819 26 6 1.6641 -4.5194 -1.2229 27 6 1.5207 -3.2599 -0.7121 28 6 1.9332 -2.1570 -1.4617 29 1 -0.3934 0.4418 0.7651 30 1 1.7922 -0.5138 0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5615 2.4678 -1.2085 33 1 2.6069 0.9240 -2.4572 34 1 4.1094 -1.6405 -4.7835 35 1 3.9402 0.1110 -4.5159 36 1 3.5835 -0.4286 -7.1322 37 1 0.3048 1.0457 -8.8111 38 1 1.5499 1.7031 -7.6627 39 1 2.5614 0.7169 -11.6013 40 1 0.9696 1.2193 -10.9832 41 1 3.7303 2.7139 -12.6520 42 1 3.9999 5.2632 -12.0854 43 1 2.5689 5.7731 -9.8929 44 1 3.0073 -1.4143 -9.3470 45 1 1.3316 -1.1504 -9.9977 46 1 3.0576 -3.7956 -4.2175 47 1 2.3217 -5.7122 -2.8725 48 1 1.3445 -5.3723 -0.6428 49 1 1.0899 -3.1185 0.2681 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:19 Heat of formation + Delta-G solvation = 120.761246 kcal Electronic energy + Delta-G solvation = -32142.939933 eV Core-core repulsion = 27847.500429 eV Total energy + Delta-G solvation = -4295.439503 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.49854 -42.11078 -41.21783 -39.52208 -37.93095 -37.46943 -35.17435 -34.19812 -33.46987 -31.38062 -30.97881 -30.17763 -29.28073 -28.34187 -26.90466 -25.74276 -24.37350 -23.62144 -22.73071 -21.97989 -21.82732 -21.62966 -20.50932 -20.40427 -18.74513 -18.22614 -18.15565 -18.10195 -17.66460 -16.96479 -16.58166 -16.40581 -16.31475 -15.83218 -15.67757 -15.43492 -15.16466 -14.96924 -14.84354 -14.75271 -14.64199 -14.49114 -14.32193 -14.02871 -13.91070 -13.71240 -13.56099 -13.47170 -13.39154 -12.95508 -12.62980 -12.45039 -12.39749 -12.34570 -11.89284 -11.81343 -11.63470 -11.61304 -11.40076 -11.10952 -10.42574 -10.35331 -10.22191 -10.08388 -9.52476 -9.02610 -8.53519 -4.95614 0.26871 0.79234 0.96926 1.35825 1.37385 1.38381 1.53688 1.67085 1.76534 1.95494 2.04356 2.05876 3.09546 3.12759 3.25454 3.42583 3.43784 3.48136 3.62031 3.69327 3.76061 3.81150 3.85765 3.86988 3.90155 3.99576 4.10493 4.18802 4.25402 4.31908 4.36820 4.45264 4.46244 4.54375 4.62262 4.67866 4.70572 4.78330 4.80048 4.87237 4.90398 4.93430 4.98979 4.99747 5.10484 5.25240 5.39503 5.64338 5.73184 5.79963 5.85531 5.89265 6.05673 6.13150 6.29364 6.36572 6.78693 6.84758 7.00019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.032 4.032 3 Si 0.682 3.318 4 C -0.150 4.150 5 C 0.064 3.936 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.493 3.507 9 O -0.507 6.507 10 N -0.712 5.712 11 C 0.119 3.881 12 H 0.105 0.895 13 C -0.133 4.133 14 C -0.121 4.121 15 H 0.094 0.906 16 C 0.142 3.858 17 N -0.372 5.372 18 C 0.050 3.950 19 C -0.274 4.274 20 C 0.041 3.959 21 N -0.290 5.290 22 C -0.136 4.136 23 C 0.109 3.891 24 C -0.127 4.127 25 C -0.096 4.096 26 C -0.145 4.145 27 C -0.063 4.063 28 C -0.085 4.085 29 H 0.377 0.623 30 H 0.070 0.930 31 H -0.256 1.256 32 H -0.254 1.254 33 H 0.162 0.838 34 H 0.119 0.881 35 H 0.121 0.879 36 H 0.401 0.599 37 H 0.093 0.907 38 H 0.075 0.925 39 H 0.098 0.902 40 H 0.088 0.912 41 H 0.172 0.828 42 H 0.147 0.853 43 H 0.182 0.818 44 H 0.079 0.921 45 H 0.101 0.899 46 H 0.115 0.885 47 H 0.126 0.874 48 H 0.124 0.876 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.054 0.332 -2.346 5.582 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.144 4.144 3 Si 0.583 3.417 4 C -0.158 4.158 5 C -0.060 4.060 6 N -0.149 5.149 7 C -0.034 4.034 8 C 0.277 3.723 9 O -0.380 6.380 10 N -0.364 5.364 11 C 0.013 3.987 12 H 0.123 0.877 13 C -0.171 4.171 14 C -0.140 4.140 15 H 0.112 0.888 16 C 0.020 3.980 17 N -0.155 5.155 18 C -0.096 4.096 19 C -0.304 4.304 20 C -0.145 4.145 21 N -0.111 5.111 22 C -0.175 4.175 23 C 0.005 3.995 24 C -0.148 4.148 25 C -0.115 4.115 26 C -0.164 4.164 27 C -0.082 4.082 28 C -0.089 4.089 29 H 0.224 0.776 30 H 0.088 0.912 31 H -0.181 1.181 32 H -0.179 1.179 33 H 0.179 0.821 34 H 0.137 0.863 35 H 0.139 0.861 36 H 0.236 0.764 37 H 0.112 0.888 38 H 0.094 0.906 39 H 0.116 0.884 40 H 0.106 0.894 41 H 0.190 0.810 42 H 0.165 0.835 43 H 0.199 0.801 44 H 0.098 0.902 45 H 0.120 0.880 46 H 0.133 0.867 47 H 0.144 0.856 48 H 0.142 0.858 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.099 -0.131 -2.525 4.816 hybrid contribution 1.170 0.131 -1.308 1.760 sum 5.270 0.000 -3.833 6.516 Atomic orbital electron populations 1.86575 1.17575 1.81640 1.49256 1.23931 0.85300 1.09007 0.96127 0.95300 0.80714 0.77863 0.87838 1.19532 1.08256 0.91760 0.96233 1.21407 1.01993 0.93551 0.89096 1.43143 1.54037 1.04646 1.13074 1.21573 0.94565 1.05929 0.81353 1.20986 0.90820 0.77050 0.83441 1.90834 1.19790 1.46849 1.80570 1.45601 1.10434 1.73687 1.06724 1.21856 0.91808 0.98072 0.86937 0.87656 1.23438 0.98946 0.96848 0.97908 1.22945 1.00567 0.95788 0.94688 0.88772 1.21784 1.01543 0.76095 0.98540 1.48744 1.37309 1.08382 1.21053 1.22610 0.96276 0.95097 0.95647 1.21561 1.10386 0.96053 1.02361 1.23956 0.96562 0.97565 0.96402 1.77405 1.22970 0.95970 1.14789 1.23339 1.02625 0.95296 0.96196 1.18172 1.01442 0.85802 0.94102 1.19950 1.05375 0.89157 1.00313 1.20827 0.98311 0.97916 0.94449 1.20671 1.02410 0.96905 0.96454 1.20284 0.97771 0.90835 0.99261 1.18927 1.03175 0.92589 0.94224 0.77558 0.91235 1.18052 1.17866 0.82098 0.86269 0.86134 0.76431 0.88842 0.90647 0.88373 0.89428 0.81046 0.83542 0.80121 0.90246 0.88014 0.86694 0.85629 0.85791 0.85860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.52 12.86 -35.23 -0.45 -1.97 16 2 C -0.03 -0.07 3.05 36.01 0.11 0.04 16 3 Si 0.68 0.07 30.78 -169.99 -5.23 -5.17 16 4 C -0.15 -0.76 5.61 -102.71 -0.58 -1.34 16 5 C 0.06 0.27 9.89 -16.73 -0.17 0.11 16 6 N -0.47 -1.67 2.27 -115.71 -0.26 -1.94 16 7 C 0.09 -0.05 6.48 -5.20 -0.03 -0.08 16 8 C 0.49 0.87 7.90 -10.98 -0.09 0.78 16 9 O -0.51 -3.63 16.04 5.55 0.09 -3.54 16 10 N -0.71 0.96 5.26 -53.02 -0.28 0.68 16 11 C 0.12 -0.09 4.29 -67.12 -0.29 -0.38 16 12 H 0.11 0.16 7.50 -51.93 -0.39 -0.23 16 13 C -0.13 0.03 7.45 -25.78 -0.19 -0.16 16 14 C -0.12 0.29 3.72 -89.67 -0.33 -0.05 16 15 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 16 C 0.14 -0.31 6.35 -4.04 -0.03 -0.33 16 17 N -0.37 -0.30 3.68 -61.36 -0.23 -0.52 16 18 C 0.05 -0.01 11.45 -17.22 -0.20 -0.20 16 19 C -0.27 -0.19 10.80 -40.01 -0.43 -0.62 16 20 C 0.04 0.07 12.03 -17.36 -0.21 -0.13 16 21 N -0.29 -0.92 12.42 30.62 0.38 -0.54 16 22 C -0.14 0.48 7.38 -25.92 -0.19 0.28 16 23 C 0.11 0.56 6.80 -83.99 -0.57 -0.01 16 24 C -0.13 -0.46 10.00 -39.43 -0.39 -0.85 16 25 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 26 C -0.15 -0.46 9.97 -39.95 -0.40 -0.86 16 27 C -0.06 -0.28 10.05 -39.65 -0.40 -0.68 16 28 C -0.09 -0.50 6.35 -105.14 -0.67 -1.17 16 29 H 0.38 -1.03 8.74 45.56 0.40 -0.63 16 30 H 0.07 0.04 7.96 -51.93 -0.41 -0.38 16 31 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 32 H -0.25 -0.80 7.05 56.52 0.40 -0.40 16 33 H 0.16 0.40 6.30 -52.49 -0.33 0.07 16 34 H 0.12 -0.38 8.14 -51.93 -0.42 -0.81 16 35 H 0.12 -0.41 8.12 -51.93 -0.42 -0.83 16 36 H 0.40 -1.73 8.70 -40.82 -0.36 -2.09 16 37 H 0.09 0.00 7.91 -51.93 -0.41 -0.41 16 38 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 39 H 0.10 -0.45 8.07 -51.93 -0.42 -0.87 16 40 H 0.09 -0.19 7.85 -51.93 -0.41 -0.60 16 41 H 0.17 -0.59 8.06 -52.49 -0.42 -1.01 16 42 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 43 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 44 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 45 H 0.10 -0.44 8.10 -51.92 -0.42 -0.86 16 46 H 0.12 0.17 8.06 -52.49 -0.42 -0.26 16 47 H 0.13 0.05 8.06 -52.49 -0.42 -0.37 16 48 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 49 H 0.12 0.36 8.06 -52.48 -0.42 -0.06 16 LS Contribution 415.28 15.07 6.26 6.26 Total: 0.00 -13.79 415.28 -12.19 -25.99 By element: Atomic # 1 Polarization: -5.90 SS G_CDS: -7.02 Total: -12.92 kcal Atomic # 6 Polarization: -0.88 SS G_CDS: -5.45 Total: -6.32 kcal Atomic # 7 Polarization: -1.94 SS G_CDS: -0.39 Total: -2.33 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -0.36 Total: -5.51 kcal Atomic # 14 Polarization: 0.07 SS G_CDS: -5.23 Total: -5.17 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -13.79 -12.19 -25.99 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 146.750 kcal (2) G-P(sol) polarization free energy of solvation -13.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.194 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.989 kcal (6) G-S(sol) free energy of system = (1) + (5) 120.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds