Wall clock time and date at job start Sun Mar 7 2021 04:38:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.47364 * 2 1 4 4 C 1.50700 * 109.47420 * 239.99792 * 2 1 3 5 5 C 1.34236 * 126.49994 * 105.31474 * 4 2 1 6 6 N 1.36837 * 109.93779 * 180.13785 * 5 4 2 7 7 C 1.46492 * 125.06239 * 179.85138 * 6 5 4 8 8 C 1.50703 * 109.47441 * 264.69467 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.09000 * 112.84813 * 334.38493 * 11 10 8 13 13 C 1.53783 * 113.61758 * 105.58441 * 11 10 8 14 14 C 1.54050 * 86.98283 * 89.15928 * 13 11 10 15 15 H 1.09002 * 113.61571 * 270.88625 * 14 13 11 16 16 C 1.53006 * 113.69400 * 139.99266 * 14 13 11 17 17 N 1.46500 * 109.47036 * 87.46545 * 16 14 13 18 18 C 1.34950 * 126.03567 * 124.99999 * 17 16 14 19 19 C 1.35317 * 107.74507 * 179.97438 * 18 17 16 20 20 C 1.39866 * 107.92160 * 0.02562 * 19 18 17 21 21 N 1.30846 * 108.20023 * 359.73687 * 20 19 18 22 22 C 1.53775 * 87.07915 * 25.43148 * 14 13 11 23 23 C 1.37691 * 109.87191 * 359.58450 * 6 5 4 24 24 C 1.39089 * 133.51397 * 180.26147 * 23 6 5 25 25 C 1.37786 * 119.78006 * 179.97438 * 24 23 6 26 26 C 1.38793 * 120.66633 * 0.02562 * 25 24 23 27 27 C 1.36664 * 120.52585 * 0.02562 * 26 25 24 28 28 C 1.39587 * 119.76505 * 359.97438 * 27 26 25 29 29 H 0.96705 * 114.00149 * 300.00332 * 1 2 3 30 30 H 1.08999 * 109.46825 * 120.00029 * 2 1 3 31 31 H 1.48494 * 110.00102 * 178.67853 * 3 2 1 32 32 H 1.48502 * 109.99610 * 300.00066 * 3 2 1 33 33 H 1.08001 * 125.03396 * 359.97438 * 5 4 2 34 34 H 1.08998 * 109.47276 * 144.69383 * 7 6 5 35 35 H 1.09002 * 109.47526 * 24.69695 * 7 6 5 36 36 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 37 37 H 1.08997 * 113.61462 * 203.66215 * 13 11 10 38 38 H 1.09001 * 113.61141 * 334.56616 * 13 11 10 39 39 H 1.09000 * 109.47239 * 207.46589 * 16 14 13 40 40 H 1.08997 * 109.46976 * 327.46283 * 16 14 13 41 41 H 1.08000 * 126.12491 * 359.95683 * 18 17 16 42 42 H 1.07999 * 126.03830 * 180.02562 * 19 18 17 43 43 H 1.07997 * 125.90305 * 180.02562 * 20 19 18 44 44 H 1.09000 * 113.62018 * 220.01830 * 22 14 13 45 45 H 1.09007 * 113.61161 * 89.11936 * 22 14 13 46 46 H 1.08000 * 120.10507 * 359.96101 * 24 23 6 47 47 H 1.07998 * 119.66822 * 179.97438 * 25 24 23 48 48 H 1.07991 * 119.73566 * 179.97438 * 26 25 24 49 49 H 1.08003 * 120.11499 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4663 -0.1380 -2.3204 6 7 2.8036 -1.0991 -3.2342 7 6 3.4092 -0.8406 -4.5428 8 6 2.3304 -0.7843 -5.5935 9 8 1.1698 -0.9449 -5.2800 10 7 2.6552 -0.5566 -6.8815 11 6 1.6058 -0.4959 -7.9019 12 1 0.7151 -1.0609 -7.6271 13 6 1.3040 0.9305 -8.3912 14 6 2.3980 0.7102 -9.4532 15 1 3.3955 0.9948 -9.1181 16 6 2.0462 1.2851 -10.8268 17 7 2.4642 2.6878 -10.8906 18 6 3.2743 3.2332 -11.8220 19 6 3.4132 4.5470 -11.5294 20 6 2.6628 4.8136 -10.3796 21 7 2.0892 3.7009 -9.9989 22 6 2.1107 -0.7949 -9.3233 23 6 2.4944 -2.3458 -2.7380 24 6 2.6298 -3.6364 -3.2387 25 6 2.2161 -4.7109 -2.4819 26 6 1.6641 -4.5194 -1.2229 27 6 1.5207 -3.2599 -0.7121 28 6 1.9332 -2.1570 -1.4617 29 1 -0.3934 0.4418 0.7651 30 1 1.7922 -0.5138 0.8900 31 1 3.5346 1.7702 0.0322 32 1 1.5615 2.4678 -1.2085 33 1 2.6069 0.9240 -2.4572 34 1 4.1094 -1.6405 -4.7835 35 1 3.9402 0.1110 -4.5159 36 1 3.5835 -0.4286 -7.1322 37 1 0.3048 1.0457 -8.8111 38 1 1.5499 1.7031 -7.6627 39 1 2.5614 0.7169 -11.6013 40 1 0.9696 1.2193 -10.9832 41 1 3.7303 2.7139 -12.6520 42 1 3.9999 5.2632 -12.0854 43 1 2.5689 5.7731 -9.8929 44 1 3.0073 -1.4143 -9.3470 45 1 1.3316 -1.1504 -9.9977 46 1 3.0576 -3.7956 -4.2175 47 1 2.3217 -5.7122 -2.8725 48 1 1.3445 -5.3723 -0.6428 49 1 1.0899 -3.1185 0.2681 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688104_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:18 Heat of formation + Delta-G solvation = 118.489882 kcal Electronic energy + Delta-G solvation = -32143.038426 eV Core-core repulsion = 27847.500429 eV Total energy + Delta-G solvation = -4295.537997 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.68252 -42.09409 -41.26864 -39.59293 -38.12217 -37.63042 -35.21918 -34.34194 -33.49547 -31.54474 -30.98192 -30.39553 -29.36248 -28.32493 -26.79819 -25.88218 -24.37133 -23.81147 -22.90117 -21.96794 -21.91252 -21.62715 -20.66187 -20.41714 -18.80440 -18.35186 -18.25328 -18.12252 -17.82743 -16.97005 -16.58692 -16.54475 -16.42758 -15.82723 -15.80847 -15.55254 -15.19277 -14.99766 -14.93667 -14.87691 -14.80341 -14.56150 -14.40790 -14.21265 -13.82188 -13.65775 -13.65436 -13.47636 -13.37143 -12.87827 -12.79185 -12.67170 -12.54003 -12.28103 -12.08384 -11.82969 -11.77066 -11.62301 -11.33065 -11.29996 -10.66880 -10.37994 -10.26224 -10.20227 -9.51650 -9.28354 -8.76385 -4.99614 0.01817 0.54828 0.98449 1.20592 1.26926 1.30718 1.53678 1.64583 1.66625 1.92778 1.95815 2.01524 2.85992 3.26543 3.38788 3.40308 3.44705 3.54198 3.60857 3.64424 3.70648 3.78540 3.92729 3.96326 3.96733 4.06123 4.16428 4.17086 4.20572 4.31112 4.31997 4.40192 4.50092 4.58431 4.59209 4.66464 4.68565 4.73239 4.75385 4.81812 4.88695 4.93033 4.96932 5.05018 5.05234 5.13608 5.42467 5.43340 5.56475 5.63235 5.64178 5.72551 6.00519 6.13069 6.16850 6.30554 6.76699 6.97275 6.97706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.571 6.571 2 C -0.050 4.050 3 Si 0.788 3.212 4 C -0.179 4.179 5 C 0.049 3.951 6 N -0.468 5.468 7 C 0.088 3.912 8 C 0.493 3.507 9 O -0.571 6.571 10 N -0.693 5.693 11 C 0.110 3.890 12 H 0.078 0.922 13 C -0.138 4.138 14 C -0.106 4.106 15 H 0.093 0.907 16 C 0.134 3.866 17 N -0.376 5.376 18 C 0.054 3.946 19 C -0.293 4.293 20 C 0.025 3.975 21 N -0.333 5.333 22 C -0.113 4.113 23 C 0.089 3.911 24 C -0.137 4.137 25 C -0.101 4.101 26 C -0.150 4.150 27 C -0.081 4.081 28 C -0.120 4.120 29 H 0.399 0.601 30 H 0.082 0.918 31 H -0.281 1.281 32 H -0.298 1.298 33 H 0.171 0.829 34 H 0.152 0.848 35 H 0.151 0.849 36 H 0.419 0.581 37 H 0.085 0.915 38 H 0.046 0.954 39 H 0.133 0.867 40 H 0.085 0.915 41 H 0.208 0.792 42 H 0.160 0.840 43 H 0.192 0.808 44 H 0.099 0.901 45 H 0.115 0.885 46 H 0.134 0.866 47 H 0.152 0.848 48 H 0.145 0.855 49 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.874 -0.615 -3.827 7.892 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.380 6.380 2 C -0.159 4.159 3 Si 0.692 3.308 4 C -0.186 4.186 5 C -0.076 4.076 6 N -0.151 5.151 7 C -0.037 4.037 8 C 0.278 3.722 9 O -0.449 6.449 10 N -0.346 5.346 11 C 0.005 3.995 12 H 0.096 0.904 13 C -0.177 4.177 14 C -0.125 4.125 15 H 0.111 0.889 16 C 0.014 3.986 17 N -0.159 5.159 18 C -0.093 4.093 19 C -0.322 4.322 20 C -0.160 4.160 21 N -0.155 5.155 22 C -0.151 4.151 23 C -0.015 4.015 24 C -0.157 4.157 25 C -0.120 4.120 26 C -0.169 4.169 27 C -0.100 4.100 28 C -0.124 4.124 29 H 0.249 0.751 30 H 0.100 0.900 31 H -0.208 1.208 32 H -0.226 1.226 33 H 0.188 0.812 34 H 0.169 0.831 35 H 0.169 0.831 36 H 0.257 0.743 37 H 0.103 0.897 38 H 0.065 0.935 39 H 0.151 0.849 40 H 0.103 0.897 41 H 0.224 0.776 42 H 0.177 0.823 43 H 0.208 0.792 44 H 0.118 0.882 45 H 0.133 0.867 46 H 0.152 0.848 47 H 0.169 0.831 48 H 0.163 0.837 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 5.946 -1.086 -4.011 7.254 hybrid contribution 0.566 0.418 -0.916 1.155 sum 6.512 -0.668 -4.927 8.193 Atomic orbital electron populations 1.86514 1.18134 1.82379 1.50965 1.24306 0.85097 1.10900 0.95612 0.94192 0.77467 0.74105 0.85037 1.20056 1.08827 0.92045 0.97666 1.21689 1.02256 0.94205 0.89471 1.43349 1.53672 1.04006 1.14044 1.21954 0.93970 1.08800 0.78967 1.21417 0.90381 0.75906 0.84485 1.90811 1.22351 1.50082 1.81607 1.45470 1.11322 1.72031 1.05774 1.21887 0.91559 0.97462 0.88635 0.90374 1.23408 0.99596 0.96221 0.98426 1.22804 0.99295 0.96507 0.93901 0.88877 1.22064 1.02019 0.75145 0.99406 1.48990 1.37201 1.08901 1.20772 1.23204 0.95229 0.95028 0.95801 1.21858 1.10881 0.97090 1.02351 1.24309 0.96736 0.97886 0.97111 1.77344 1.24524 0.97065 1.16595 1.23258 1.03612 0.94617 0.93611 1.18510 1.01850 0.86851 0.94333 1.20276 1.05408 0.88773 1.01232 1.21208 0.97510 0.99003 0.94243 1.20994 1.01931 0.97072 0.96924 1.20506 0.98434 0.91295 0.99756 1.19353 1.04284 0.93431 0.95300 0.75081 0.90005 1.20769 1.22607 0.81175 0.83051 0.83111 0.74307 0.89683 0.93512 0.84937 0.89659 0.77575 0.82250 0.79150 0.88208 0.86684 0.84771 0.83063 0.83710 0.85335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -4.05 12.86 -148.98 -1.92 -5.97 16 2 C -0.05 -0.28 3.05 71.24 0.22 -0.07 16 3 Si 0.79 0.76 30.78 68.60 2.11 2.87 16 4 C -0.18 -2.19 5.61 -18.63 -0.10 -2.29 16 5 C 0.05 0.51 9.89 83.00 0.82 1.34 16 6 N -0.47 -3.94 2.27 -520.00 -1.18 -5.12 16 7 C 0.09 -0.10 6.48 85.64 0.56 0.46 16 8 C 0.49 2.24 7.90 87.66 0.69 2.94 16 9 O -0.57 -9.69 16.04 -3.04 -0.05 -9.74 16 10 N -0.69 1.76 5.26 -440.03 -2.32 -0.56 16 11 C 0.11 -0.07 4.29 45.52 0.20 0.12 16 12 H 0.08 0.42 7.50 -2.39 -0.02 0.40 16 13 C -0.14 -0.16 7.45 31.21 0.23 0.08 16 14 C -0.11 0.57 3.72 -10.18 -0.04 0.53 16 15 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 16 C 0.13 -0.75 6.35 86.38 0.55 -0.20 16 17 N -0.38 -0.42 3.68 -348.05 -1.28 -1.70 16 18 C 0.05 -0.09 11.45 83.54 0.96 0.87 16 19 C -0.29 -0.33 10.80 21.99 0.24 -0.09 16 20 C 0.02 0.11 12.03 85.23 1.02 1.14 16 21 N -0.33 -2.48 12.42 -57.02 -0.71 -3.19 16 22 C -0.11 0.95 7.38 31.12 0.23 1.18 16 23 C 0.09 1.04 6.80 39.03 0.27 1.31 16 24 C -0.14 -1.03 10.00 22.37 0.22 -0.81 16 25 C -0.10 -0.57 10.01 22.30 0.22 -0.35 16 26 C -0.15 -1.04 9.97 22.03 0.22 -0.82 16 27 C -0.08 -0.86 10.05 22.23 0.22 -0.64 16 28 C -0.12 -1.65 6.35 -20.20 -0.13 -1.78 16 29 H 0.40 -1.86 8.74 -74.05 -0.65 -2.51 16 30 H 0.08 0.18 7.96 -2.39 -0.02 0.16 16 31 H -0.28 -1.37 7.11 99.48 0.71 -0.66 16 32 H -0.30 -2.42 7.05 99.48 0.70 -1.72 16 33 H 0.17 1.17 6.30 -2.91 -0.02 1.16 16 34 H 0.15 -1.20 8.14 -2.39 -0.02 -1.22 16 35 H 0.15 -1.15 8.12 -2.39 -0.02 -1.17 16 36 H 0.42 -4.12 8.70 -92.71 -0.81 -4.93 16 37 H 0.08 0.21 7.91 -2.39 -0.02 0.19 16 38 H 0.05 0.32 8.14 -2.39 -0.02 0.30 16 39 H 0.13 -1.64 8.07 -2.39 -0.02 -1.66 16 40 H 0.09 -0.42 7.85 -2.39 -0.02 -0.43 16 41 H 0.21 -2.04 8.06 -2.91 -0.02 -2.06 16 42 H 0.16 -0.42 8.06 -2.91 -0.02 -0.44 16 43 H 0.19 0.06 8.06 -2.91 -0.02 0.03 16 44 H 0.10 -1.16 8.14 -2.39 -0.02 -1.18 16 45 H 0.11 -1.21 8.10 -2.38 -0.02 -1.22 16 46 H 0.13 0.32 8.06 -2.91 -0.02 0.30 16 47 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 48 H 0.15 0.23 8.06 -2.92 -0.02 0.21 16 49 H 0.13 1.00 8.06 -2.91 -0.02 0.98 16 Total: 0.00 -37.32 415.28 0.82 -36.50 By element: Atomic # 1 Polarization: -15.57 SS G_CDS: -0.44 Total: -16.00 kcal Atomic # 6 Polarization: -3.69 SS G_CDS: 6.60 Total: 2.91 kcal Atomic # 7 Polarization: -5.09 SS G_CDS: -5.48 Total: -10.57 kcal Atomic # 8 Polarization: -13.74 SS G_CDS: -1.96 Total: -15.71 kcal Atomic # 14 Polarization: 0.76 SS G_CDS: 2.11 Total: 2.87 kcal Total: -37.32 0.82 -36.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 154.994 kcal (2) G-P(sol) polarization free energy of solvation -37.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 117.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.505 kcal (6) G-S(sol) free energy of system = (1) + (5) 118.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds