Wall clock time and date at job start Sun Mar 7 2021 04:38:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36776 * 125.80300 * 2 1 4 4 C 1.47266 * 126.93945 * 359.95207 * 3 2 1 5 5 O 1.21633 * 119.99717 * 0.02562 * 4 3 2 6 6 N 1.34777 * 120.00100 * 180.02562 * 4 3 2 7 7 C 1.46496 * 120.00078 * 180.02562 * 6 4 3 8 8 H 1.09002 * 112.84929 * 23.80980 * 7 6 4 9 9 C 1.53784 * 113.61290 * 154.99815 * 7 6 4 10 10 C 1.53779 * 87.07846 * 89.11893 * 9 7 6 11 11 H 1.09006 * 113.61132 * 270.88385 * 10 9 7 12 12 C 1.52994 * 113.61757 * 139.98092 * 10 9 7 13 13 N 1.46500 * 109.47629 * 174.99724 * 12 10 9 14 14 C 1.34947 * 126.03817 * 124.99403 * 13 12 10 15 15 C 1.35315 * 107.74568 * 179.97438 * 14 13 12 16 16 C 1.39865 * 107.92115 * 0.02562 * 15 14 13 17 17 N 1.30838 * 108.20165 * 359.74024 * 16 15 14 18 18 C 1.53780 * 87.08551 * 25.43005 * 10 9 7 19 19 C 1.46685 * 106.11790 * 179.97438 * 3 2 1 20 20 C 1.34488 * 106.33130 * 359.97438 * 19 3 2 21 21 C 1.50696 * 125.56904 * 180.02562 * 20 19 3 22 22 O 1.42903 * 109.47131 * 299.99634 * 21 20 19 23 23 Si 1.86305 * 109.47185 * 180.02562 * 21 20 19 24 24 N 1.34657 * 125.80297 * 180.28632 * 2 1 3 25 25 H 1.09002 * 109.47135 * 90.00062 * 1 2 3 26 26 H 1.08999 * 109.46809 * 209.99970 * 1 2 3 27 27 H 1.09002 * 109.47018 * 330.00351 * 1 2 3 28 28 H 0.97000 * 119.99810 * 0.02562 * 6 4 3 29 29 H 1.08996 * 113.61378 * 203.66237 * 9 7 6 30 30 H 1.08994 * 113.61557 * 334.48841 * 9 7 6 31 31 H 1.08998 * 109.47465 * 295.00056 * 12 10 9 32 32 H 1.09001 * 109.47341 * 54.99497 * 12 10 9 33 33 H 1.07999 * 126.12533 * 359.97105 * 14 13 12 34 34 H 1.08002 * 126.03897 * 180.02562 * 15 14 13 35 35 H 1.08005 * 125.89967 * 179.97438 * 16 15 14 36 36 H 1.08997 * 113.62034 * 220.01994 * 18 10 9 37 37 H 1.09002 * 113.61489 * 89.11343 * 18 10 9 38 38 H 1.07996 * 126.83094 * 180.02562 * 19 3 2 39 39 H 1.08999 * 109.47358 * 59.99994 * 21 20 19 40 40 H 0.96700 * 114.00311 * 300.00591 * 22 21 20 41 41 H 1.48497 * 110.00233 * 179.97438 * 23 21 20 42 42 H 1.48492 * 109.99800 * 301.31995 * 23 21 20 43 43 H 0.96997 * 124.85327 * 0.03415 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5157 -0.0010 5 8 0.6838 2.7839 -0.0014 6 7 2.7849 3.5055 -0.0014 7 6 2.3503 4.9045 -0.0018 8 1 1.3472 5.0362 0.4038 9 6 3.3872 5.8718 0.5934 10 6 3.9686 5.9965 -0.8248 11 1 4.7344 5.2540 -1.0495 12 6 4.3940 7.4201 -1.1899 13 7 5.0406 7.4147 -2.5045 14 6 4.6853 8.1669 -3.5670 15 6 5.5274 7.8687 -4.5834 16 6 6.4277 6.9007 -4.1265 17 7 6.1401 6.6316 -2.8788 18 6 2.5722 5.6181 -1.3458 19 6 3.6882 0.6152 0.0006 20 6 3.6095 -0.7274 0.0015 21 6 4.7819 -1.6742 0.0030 22 8 5.5765 -1.4502 -1.1635 23 14 4.1615 -3.4309 0.0030 24 7 2.2947 -1.0921 -0.0055 25 1 -0.3633 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5138 28 1 3.7310 3.2915 -0.0014 29 1 2.9540 6.7981 0.9706 30 1 4.0654 5.4011 1.3050 31 1 3.5160 8.0653 -1.2195 32 1 5.0939 7.7932 -0.4423 33 1 3.8742 8.8792 -3.6003 34 1 5.5077 8.3016 -5.5727 35 1 7.2252 6.4553 -4.7029 36 1 2.5934 4.9422 -2.2007 37 1 1.9161 6.4750 -1.4987 38 1 4.5889 1.2110 0.0012 39 1 5.3869 -1.5021 0.8932 40 1 5.1015 -1.5854 -1.9949 41 1 5.3082 -4.3745 0.0038 42 1 3.3074 -3.6678 1.1944 43 1 1.9734 -2.0073 -0.0105 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:24 Heat of formation + Delta-G solvation = 85.405919 kcal Electronic energy + Delta-G solvation = -25930.903144 eV Core-core repulsion = 22174.146559 eV Total energy + Delta-G solvation = -3756.756585 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.50205 -42.00059 -40.88542 -39.05050 -37.81322 -34.93098 -33.45792 -32.80745 -31.94130 -30.89915 -29.02106 -28.48173 -26.78546 -25.77937 -24.42010 -23.21395 -21.94363 -21.65463 -21.46705 -20.64438 -20.04705 -18.73167 -18.21237 -17.73185 -17.01109 -16.91108 -16.64031 -16.30195 -15.88053 -15.66527 -15.47334 -15.20983 -14.98472 -14.54690 -14.53493 -14.42549 -14.18143 -14.12204 -13.92632 -13.73720 -13.53723 -13.48763 -13.40892 -12.77095 -12.72162 -12.60691 -12.27853 -12.23026 -11.61541 -11.48600 -11.33242 -10.83157 -10.52957 -10.22567 -10.01640 -9.80734 -9.40048 -9.14717 -5.33469 0.76952 0.99904 1.07721 1.21867 1.36429 1.64724 1.71373 1.96684 2.05601 2.40144 2.64264 3.27917 3.36618 3.45893 3.49432 3.61135 3.79230 3.81989 3.96795 4.00867 4.11047 4.14012 4.18980 4.34398 4.37306 4.43248 4.48618 4.60891 4.64847 4.68681 4.72509 4.75649 4.83373 4.94367 4.98691 5.00600 5.04935 5.16066 5.20765 5.28142 5.66763 5.71899 5.83362 5.86127 6.16859 6.30872 6.42437 6.70200 6.88383 7.47372 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 C 0.125 3.875 3 C -0.242 4.242 4 C 0.597 3.403 5 O -0.547 6.547 6 N -0.710 5.710 7 C 0.126 3.874 8 H 0.106 0.894 9 C -0.139 4.139 10 C -0.123 4.123 11 H 0.105 0.895 12 C 0.142 3.858 13 N -0.369 5.369 14 C 0.052 3.948 15 C -0.276 4.276 16 C 0.043 3.957 17 N -0.296 5.296 18 C -0.146 4.146 19 C -0.127 4.127 20 C -0.029 4.029 21 C -0.033 4.033 22 O -0.533 6.533 23 Si 0.673 3.327 24 N -0.545 5.545 25 H 0.082 0.918 26 H 0.066 0.934 27 H 0.103 0.897 28 H 0.401 0.599 29 H 0.099 0.901 30 H 0.079 0.921 31 H 0.097 0.903 32 H 0.086 0.914 33 H 0.172 0.828 34 H 0.146 0.854 35 H 0.182 0.818 36 H 0.072 0.928 37 H 0.091 0.909 38 H 0.146 0.854 39 H 0.125 0.875 40 H 0.381 0.619 41 H -0.243 1.243 42 H -0.252 1.252 43 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.421 -0.836 -1.010 1.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.006 3.994 3 C -0.252 4.252 4 C 0.387 3.613 5 O -0.426 6.426 6 N -0.361 5.361 7 C 0.020 3.980 8 H 0.124 0.876 9 C -0.177 4.177 10 C -0.142 4.142 11 H 0.123 0.877 12 C 0.021 3.979 13 N -0.152 5.152 14 C -0.094 4.094 15 C -0.305 4.305 16 C -0.143 4.143 17 N -0.117 5.117 18 C -0.185 4.185 19 C -0.152 4.152 20 C -0.137 4.137 21 C -0.145 4.145 22 O -0.338 6.338 23 Si 0.573 3.427 24 N -0.145 5.145 25 H 0.101 0.899 26 H 0.085 0.915 27 H 0.122 0.878 28 H 0.236 0.764 29 H 0.117 0.883 30 H 0.098 0.902 31 H 0.116 0.884 32 H 0.104 0.896 33 H 0.189 0.811 34 H 0.164 0.836 35 H 0.199 0.801 36 H 0.091 0.909 37 H 0.109 0.891 38 H 0.164 0.836 39 H 0.142 0.858 40 H 0.228 0.772 41 H -0.167 1.167 42 H -0.177 1.177 43 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -1.587 -2.119 1.038 2.844 hybrid contribution 0.481 0.555 -0.520 0.900 sum -1.106 -1.564 0.518 1.984 Atomic orbital electron populations 1.20656 0.86521 1.04563 1.03933 1.20402 0.93785 0.85250 0.99953 1.20073 0.93078 0.91932 1.20083 1.17309 0.85186 0.83994 0.74836 1.90751 1.16562 1.84344 1.50969 1.45421 1.09806 1.04864 1.75978 1.21708 0.99410 0.80312 0.96569 0.87581 1.23352 0.98276 1.00177 0.95925 1.22964 0.97890 0.96485 0.96850 0.87720 1.21795 0.97110 0.98151 0.80822 1.48721 1.24355 1.31380 1.10718 1.22587 1.00968 0.97929 0.87934 1.21547 1.01335 1.06370 1.01294 1.23914 1.00092 0.97657 0.92609 1.77324 1.02577 1.16729 1.15098 1.23519 0.95846 1.00893 0.98260 1.21791 0.95653 0.92625 1.05123 1.20538 0.84364 0.95715 1.13095 1.24417 0.91708 1.06536 0.91884 1.86550 1.38975 1.93004 1.15278 0.95390 0.84213 0.75637 0.87440 1.41712 1.05549 1.08449 1.58745 0.89921 0.91491 0.87805 0.76401 0.88282 0.90238 0.88433 0.89585 0.81097 0.83598 0.80114 0.90925 0.89087 0.83598 0.85750 0.77158 1.16692 1.17681 0.74754 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.01 9.88 36.00 0.36 0.37 16 2 C 0.12 0.13 7.17 -81.88 -0.59 -0.46 16 3 C -0.24 -0.56 6.29 -103.35 -0.65 -1.21 16 4 C 0.60 2.08 7.81 -12.59 -0.10 1.98 16 5 O -0.55 -3.39 14.41 5.25 0.08 -3.32 16 6 N -0.71 -0.67 5.26 -54.14 -0.28 -0.96 16 7 C 0.13 0.01 4.32 -67.12 -0.29 -0.28 16 8 H 0.11 0.15 7.46 -51.93 -0.39 -0.24 16 9 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 10 C -0.12 0.14 3.74 -89.81 -0.34 -0.20 16 11 H 0.10 0.07 7.97 -51.93 -0.41 -0.34 16 12 C 0.14 -0.19 6.34 -4.04 -0.03 -0.21 16 13 N -0.37 -0.58 3.68 -61.37 -0.23 -0.81 16 14 C 0.05 0.03 11.45 -17.22 -0.20 -0.16 16 15 C -0.28 -0.38 10.80 -40.01 -0.43 -0.81 16 16 C 0.04 0.10 12.03 -17.37 -0.21 -0.11 16 17 N -0.30 -1.12 12.28 30.62 0.38 -0.74 16 18 C -0.15 0.05 7.43 -25.92 -0.19 -0.14 16 19 C -0.13 -0.12 10.43 -37.50 -0.39 -0.51 16 20 C -0.03 0.01 6.11 -81.87 -0.50 -0.49 16 21 C -0.03 0.04 2.98 36.00 0.11 0.15 16 22 O -0.53 0.34 12.87 -35.23 -0.45 -0.11 16 23 Si 0.67 -1.71 30.94 -169.99 -5.26 -6.97 16 24 N -0.54 0.55 5.41 -5.42 -0.03 0.52 16 25 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.10 0.20 6.47 -51.93 -0.34 -0.14 16 28 H 0.40 -0.22 7.82 -40.82 -0.32 -0.54 16 29 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.10 -0.35 7.77 -51.93 -0.40 -0.75 16 32 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 33 H 0.17 -0.44 8.06 -52.49 -0.42 -0.86 16 34 H 0.15 -0.06 8.06 -52.49 -0.42 -0.48 16 35 H 0.18 -0.05 8.06 -52.48 -0.42 -0.47 16 36 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 37 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 38 H 0.15 -0.03 7.69 -52.49 -0.40 -0.43 16 39 H 0.13 -0.13 7.96 -51.93 -0.41 -0.54 16 40 H 0.38 -1.60 8.70 45.56 0.40 -1.21 16 41 H -0.24 -0.21 7.11 56.52 0.40 0.19 16 42 H -0.25 0.12 7.11 56.52 0.40 0.52 16 43 H 0.41 -1.48 6.70 -40.82 -0.27 -1.75 16 LS Contribution 362.67 15.07 5.47 5.47 Total: 0.00 -9.81 362.67 -9.94 -19.75 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -5.96 Total: -10.86 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -3.64 Total: -1.97 kcal Atomic # 7 Polarization: -1.82 SS G_CDS: -0.16 Total: -1.99 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.38 Total: -3.43 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.26 Total: -6.97 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -9.81 -9.94 -19.75 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.156 kcal (2) G-P(sol) polarization free energy of solvation -9.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 95.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.750 kcal (6) G-S(sol) free energy of system = (1) + (5) 85.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds