Wall clock time and date at job start Sun Mar 7 2021 04:38:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42899 * 109.47030 * 2 1 4 4 C 1.35902 * 117.00027 * 84.94581 * 3 2 1 5 5 C 1.38735 * 120.05398 * 174.27406 * 4 3 2 6 6 C 1.38149 * 119.93905 * 179.74460 * 5 4 3 7 7 C 1.38262 * 120.05892 * 0.51441 * 6 5 4 8 8 C 1.50700 * 119.94762 * 179.74719 * 7 6 5 9 9 O 1.42895 * 109.47429 * 120.01646 * 8 7 6 10 10 Si 1.86307 * 109.46785 * 0.02562 * 8 7 6 11 11 C 1.38273 * 120.11134 * 359.75832 * 7 6 5 12 12 C 1.38148 * 120.05503 * 359.97438 * 11 7 6 13 13 C 1.50701 * 109.47276 * 239.99847 * 2 1 3 14 14 O 1.21273 * 119.99799 * 119.99803 * 13 2 1 15 15 N 1.34781 * 119.99896 * 299.72444 * 13 2 1 16 16 C 1.46496 * 119.99663 * 180.27562 * 15 13 2 17 17 H 1.08999 * 112.85253 * 336.19696 * 16 15 13 18 18 C 1.53781 * 113.61305 * 107.50636 * 16 15 13 19 19 C 1.53783 * 87.08277 * 89.11241 * 18 16 15 20 20 H 1.08992 * 113.69192 * 270.87393 * 19 18 16 21 21 C 1.53000 * 113.61225 * 139.97749 * 19 18 16 22 22 N 1.46502 * 109.46779 * 87.50429 * 21 19 18 23 23 C 1.34439 * 126.82003 * 124.70782 * 22 21 19 24 24 N 1.30834 * 108.07371 * 179.89415 * 23 22 21 25 25 C 1.33238 * 109.82718 * 0.38059 * 24 23 22 26 26 N 1.30711 * 108.95136 * 359.76194 * 25 24 23 27 27 C 1.53781 * 113.61130 * 205.00125 * 16 15 13 28 28 H 1.09002 * 109.47205 * 60.00139 * 1 2 3 29 29 H 1.09003 * 109.47263 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47551 * 300.00297 * 1 2 3 31 31 H 1.09006 * 109.46735 * 119.99878 * 2 1 3 32 32 H 1.07994 * 120.02992 * 359.97438 * 5 4 3 33 33 H 1.07995 * 119.96949 * 180.27442 * 6 5 4 34 34 H 1.09004 * 109.46996 * 240.01695 * 8 7 6 35 35 H 0.96697 * 114.00011 * 180.02562 * 9 8 7 36 36 H 1.48498 * 109.99669 * 60.00622 * 10 8 7 37 37 H 1.48500 * 109.99848 * 181.32117 * 10 8 7 38 38 H 1.08002 * 119.97546 * 180.02562 * 11 7 6 39 39 H 1.08001 * 120.02705 * 179.97438 * 12 11 7 40 40 H 0.96997 * 119.99805 * 0.27921 * 15 13 2 41 41 H 1.08998 * 113.60969 * 203.66216 * 18 16 15 42 42 H 1.08993 * 113.61423 * 334.56310 * 18 16 15 43 43 H 1.09001 * 109.47382 * 207.50205 * 21 19 18 44 44 H 1.08995 * 109.47381 * 327.50360 * 21 19 18 45 45 H 1.08000 * 125.95993 * 0.03738 * 23 22 21 46 46 H 1.08006 * 125.52114 * 179.73123 * 25 24 23 47 47 H 1.09002 * 113.61853 * 25.43461 * 27 16 15 48 48 H 1.08999 * 113.61573 * 156.33661 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9645 1.2062 5 6 2.6775 3.2281 1.2931 6 6 2.7783 3.8556 2.5197 7 6 2.3254 3.2211 3.6615 8 6 2.4418 3.9055 4.9991 9 8 1.1404 4.0659 5.5670 10 14 3.2314 5.5779 4.7741 11 6 1.7659 1.9593 3.5783 12 6 1.6577 1.3298 2.3534 13 6 2.0324 -0.7104 -1.2304 14 8 2.7296 -0.1210 -2.0287 15 7 1.7114 -2.0024 -1.4409 16 6 2.2047 -2.6947 -2.6339 17 1 2.4478 -2.0129 -3.4489 18 6 3.3100 -3.7219 -2.3372 19 6 2.1880 -4.7543 -2.1369 20 1 1.8156 -4.8033 -1.1137 21 6 2.5120 -6.1320 -2.7180 22 7 3.2295 -6.9271 -1.7184 23 6 2.8856 -8.1423 -1.2573 24 7 3.7822 -8.5118 -0.3790 25 6 4.7049 -7.5597 -0.2471 26 7 4.4098 -6.5689 -1.0470 27 6 1.3266 -3.8814 -3.0648 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 1.8933 -0.5139 0.8901 32 1 3.0357 3.7223 0.4021 33 1 3.2149 4.8411 2.5873 34 1 3.0566 3.2998 5.6649 35 1 1.1390 4.5009 6.4306 36 1 2.4024 6.4132 3.8684 37 1 3.3810 6.2500 6.0898 38 1 1.4123 1.4658 4.4716 39 1 1.2210 0.3441 2.2890 40 1 1.1537 -2.4738 -0.8024 41 1 3.9505 -3.9337 -3.1934 42 1 3.8731 -3.5073 -1.4290 43 1 1.5859 -6.6390 -2.9890 44 1 3.1350 -6.0151 -3.6046 45 1 2.0215 -8.7146 -1.5608 46 1 5.5581 -7.5999 0.4140 47 1 0.2884 -3.7956 -2.7440 48 1 1.4248 -4.1368 -4.1199 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:28 Heat of formation + Delta-G solvation = 55.461355 kcal Electronic energy + Delta-G solvation = -30945.648910 eV Core-core repulsion = 26585.147880 eV Total energy + Delta-G solvation = -4360.501030 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -43.01641 -41.87111 -41.08536 -39.79640 -38.76806 -37.31957 -35.55685 -34.35424 -32.93772 -32.14824 -32.06842 -31.42974 -29.20109 -26.94793 -26.74744 -25.74621 -24.63392 -23.98470 -22.91952 -22.53871 -22.37728 -21.52662 -20.53719 -19.44125 -18.73328 -18.49367 -18.24838 -17.39469 -16.93602 -16.87553 -16.76430 -16.66585 -16.23009 -15.94719 -15.83163 -15.63738 -15.36616 -15.21765 -15.00319 -14.72905 -14.42992 -14.38248 -14.23201 -13.98349 -13.88689 -13.69782 -13.53635 -13.44906 -13.21814 -12.98425 -12.96574 -12.41989 -12.33628 -12.19318 -11.89313 -11.85351 -11.66247 -11.48818 -10.94677 -10.85834 -10.75299 -10.64193 -10.49250 -10.22081 -10.00192 -9.14884 -4.95726 0.27995 0.38811 0.66056 1.28381 1.29058 1.39865 1.45653 1.59937 1.96359 2.03633 2.41679 2.64874 3.05179 3.21306 3.33950 3.34451 3.37155 3.40770 3.52476 3.55611 3.71307 3.80995 3.81843 3.84882 3.90722 3.91326 3.95358 4.16225 4.20427 4.27633 4.33894 4.36118 4.41299 4.44481 4.51249 4.57747 4.62275 4.63158 4.76629 4.86796 4.91660 4.96545 5.01884 5.20826 5.26874 5.32780 5.39280 5.47017 5.53549 5.68266 5.79295 6.20049 6.36518 6.43585 7.03997 7.12759 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.134 3.866 5 C -0.140 4.140 6 C -0.073 4.073 7 C -0.111 4.111 8 C -0.071 4.071 9 O -0.537 6.537 10 Si 0.679 3.321 11 C -0.050 4.050 12 C -0.212 4.212 13 C 0.523 3.477 14 O -0.508 6.508 15 N -0.710 5.710 16 C 0.120 3.880 17 H 0.109 0.891 18 C -0.134 4.134 19 C -0.123 4.123 20 H 0.095 0.905 21 C 0.137 3.863 22 N -0.379 5.379 23 C 0.251 3.749 24 N -0.547 5.547 25 C 0.196 3.804 26 N -0.312 5.312 27 C -0.136 4.136 28 H 0.077 0.923 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.101 0.899 32 H 0.139 0.861 33 H 0.134 0.866 34 H 0.075 0.925 35 H 0.379 0.621 36 H -0.254 1.254 37 H -0.261 1.261 38 H 0.128 0.872 39 H 0.131 0.869 40 H 0.401 0.599 41 H 0.094 0.906 42 H 0.076 0.924 43 H 0.104 0.896 44 H 0.093 0.907 45 H 0.218 0.782 46 H 0.216 0.784 47 H 0.080 0.920 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.813 -3.309 0.246 4.350 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.007 3.993 3 O -0.195 6.195 4 C 0.089 3.911 5 C -0.159 4.159 6 C -0.090 4.090 7 C -0.111 4.111 8 C -0.180 4.180 9 O -0.345 6.345 10 Si 0.580 3.420 11 C -0.068 4.068 12 C -0.230 4.230 13 C 0.307 3.693 14 O -0.381 6.381 15 N -0.363 5.363 16 C 0.014 3.986 17 H 0.127 0.873 18 C -0.173 4.173 19 C -0.142 4.142 20 H 0.113 0.887 21 C 0.015 3.985 22 N -0.170 5.170 23 C -0.046 4.046 24 N -0.274 5.274 25 C -0.107 4.107 26 N -0.139 5.139 27 C -0.175 4.175 28 H 0.096 0.904 29 H 0.097 0.903 30 H 0.098 0.902 31 H 0.119 0.881 32 H 0.157 0.843 33 H 0.152 0.848 34 H 0.093 0.907 35 H 0.227 0.773 36 H -0.179 1.179 37 H -0.187 1.187 38 H 0.146 0.854 39 H 0.149 0.851 40 H 0.236 0.764 41 H 0.113 0.887 42 H 0.095 0.905 43 H 0.123 0.877 44 H 0.111 0.889 45 H 0.234 0.766 46 H 0.232 0.768 47 H 0.099 0.901 48 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -2.117 -1.816 -0.956 2.948 hybrid contribution -1.443 -0.672 1.362 2.096 sum -3.560 -2.488 0.406 4.362 Atomic orbital electron populations 1.22369 0.92352 1.03812 1.05020 1.22171 0.95869 0.83396 0.97886 1.86215 1.80956 1.25297 1.27072 1.19061 0.95290 0.92854 0.83920 1.20379 1.03255 0.93627 0.98638 1.20764 0.98120 0.98959 0.91197 1.19161 1.03209 0.95411 0.93325 1.24720 0.88991 1.09752 0.94574 1.86583 1.27169 1.81959 1.38747 0.95089 0.88926 0.75727 0.82223 1.20764 0.95199 0.93774 0.97049 1.21294 1.07300 1.01810 0.92624 1.20080 0.80444 0.81770 0.86995 1.90778 1.35928 1.65666 1.45707 1.45505 1.54064 1.11182 1.25585 1.21852 0.95147 0.93293 0.88263 0.87334 1.23421 0.96204 0.94247 1.03443 1.22914 0.98591 0.92503 1.00190 0.88685 1.21922 0.96120 0.91352 0.89096 1.50602 1.19226 1.14921 1.32240 1.26133 0.99595 0.86082 0.92778 1.70566 1.05344 1.30902 1.20551 1.26077 0.99281 0.87272 0.98063 1.78094 0.99654 1.23951 1.12249 1.23358 0.98995 0.94371 1.00727 0.90365 0.90321 0.90208 0.88107 0.84339 0.84826 0.90676 0.77304 1.17882 1.18656 0.85413 0.85138 0.76426 0.88708 0.90483 0.87739 0.88875 0.76593 0.76752 0.90128 0.87890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.39 9.07 37.16 0.34 0.73 16 2 C 0.07 0.00 2.64 -27.88 -0.07 -0.08 16 3 O -0.28 -0.92 9.33 -39.34 -0.37 -1.29 16 4 C 0.13 0.33 6.60 -39.21 -0.26 0.07 16 5 C -0.14 -0.29 9.99 -39.43 -0.39 -0.69 16 6 C -0.07 -0.09 8.66 -39.61 -0.34 -0.43 16 7 C -0.11 -0.17 5.42 -104.60 -0.57 -0.74 16 8 C -0.07 -0.01 2.81 36.01 0.10 0.09 16 9 O -0.54 -0.69 12.74 -35.23 -0.45 -1.14 16 10 Si 0.68 -0.37 29.78 -169.99 -5.06 -5.44 16 11 C -0.05 -0.07 9.60 -39.60 -0.38 -0.45 16 12 C -0.21 -0.19 8.24 -39.43 -0.33 -0.52 16 13 C 0.52 0.82 7.23 -10.98 -0.08 0.74 16 14 O -0.51 -3.23 16.10 -14.35 -0.23 -3.46 16 15 N -0.71 1.32 5.16 -53.02 -0.27 1.05 16 16 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 17 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 18 C -0.13 0.22 7.43 -25.92 -0.19 0.03 16 19 C -0.12 0.47 3.73 -89.80 -0.33 0.13 16 20 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 21 C 0.14 -0.55 6.39 -4.04 -0.03 -0.58 16 22 N -0.38 0.25 3.69 -62.63 -0.23 0.02 16 23 C 0.25 -0.18 12.63 -90.64 -1.14 -1.33 16 24 N -0.55 -1.27 11.19 -15.83 -0.18 -1.45 16 25 C 0.20 0.34 13.03 -91.82 -1.20 -0.85 16 26 N -0.31 -0.63 12.57 29.29 0.37 -0.26 16 27 C -0.14 0.65 7.39 -25.92 -0.19 0.46 16 28 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.08 -0.38 7.58 -51.93 -0.39 -0.77 16 30 H 0.08 -0.17 6.91 -51.93 -0.36 -0.52 16 31 H 0.10 -0.21 6.31 -51.93 -0.33 -0.53 16 32 H 0.14 0.16 8.06 -52.49 -0.42 -0.27 16 33 H 0.13 -0.10 4.87 -52.49 -0.26 -0.36 16 34 H 0.08 -0.11 7.96 -51.93 -0.41 -0.53 16 35 H 0.38 -1.00 8.74 45.56 0.40 -0.61 16 36 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 37 H -0.26 -0.37 7.11 56.52 0.40 0.04 16 38 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 39 H 0.13 -0.19 5.43 -52.49 -0.28 -0.48 16 40 H 0.40 -1.84 8.13 -40.82 -0.33 -2.18 16 41 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 42 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 43 H 0.10 -0.71 8.09 -51.93 -0.42 -1.13 16 44 H 0.09 -0.38 7.84 -51.93 -0.41 -0.79 16 45 H 0.22 -1.11 8.06 -52.49 -0.42 -1.53 16 46 H 0.22 -0.24 8.06 -52.48 -0.42 -0.66 16 47 H 0.08 -0.43 8.14 -51.93 -0.42 -0.86 16 48 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 LS Contribution 400.09 15.07 6.03 6.03 Total: 0.00 -12.90 400.09 -12.35 -25.25 By element: Atomic # 1 Polarization: -8.79 SS G_CDS: -6.59 Total: -15.39 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -5.36 Total: -3.93 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.31 Total: -0.64 kcal Atomic # 8 Polarization: -4.84 SS G_CDS: -1.05 Total: -5.89 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.06 Total: -5.44 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -12.90 -12.35 -25.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.707 kcal (2) G-P(sol) polarization free energy of solvation -12.899 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.347 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.245 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds