Wall clock time and date at job start Sun Mar 7 2021 04:38:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 O 1.42899 * 109.47030 * 2 1 4 4 C 1.35902 * 117.00027 * 84.94581 * 3 2 1 5 5 C 1.38735 * 120.05398 * 174.27406 * 4 3 2 6 6 C 1.38149 * 119.93905 * 179.74460 * 5 4 3 7 7 C 1.38262 * 120.05892 * 0.51441 * 6 5 4 8 8 C 1.50700 * 119.94762 * 179.74719 * 7 6 5 9 9 O 1.42895 * 109.47429 * 120.01646 * 8 7 6 10 10 Si 1.86307 * 109.46785 * 0.02562 * 8 7 6 11 11 C 1.38273 * 120.11134 * 359.75832 * 7 6 5 12 12 C 1.38148 * 120.05503 * 359.97438 * 11 7 6 13 13 C 1.50701 * 109.47276 * 239.99847 * 2 1 3 14 14 O 1.21273 * 119.99799 * 119.99803 * 13 2 1 15 15 N 1.34781 * 119.99896 * 299.72444 * 13 2 1 16 16 C 1.46496 * 119.99663 * 180.27562 * 15 13 2 17 17 H 1.08999 * 112.85253 * 336.19696 * 16 15 13 18 18 C 1.53781 * 113.61305 * 107.50636 * 16 15 13 19 19 C 1.53783 * 87.08277 * 89.11241 * 18 16 15 20 20 H 1.08992 * 113.69192 * 270.87393 * 19 18 16 21 21 C 1.53000 * 113.61225 * 139.97749 * 19 18 16 22 22 N 1.46502 * 109.46779 * 87.50429 * 21 19 18 23 23 C 1.34439 * 126.82003 * 124.70782 * 22 21 19 24 24 N 1.30834 * 108.07371 * 179.89415 * 23 22 21 25 25 C 1.33238 * 109.82718 * 0.38059 * 24 23 22 26 26 N 1.30711 * 108.95136 * 359.76194 * 25 24 23 27 27 C 1.53781 * 113.61130 * 205.00125 * 16 15 13 28 28 H 1.09002 * 109.47205 * 60.00139 * 1 2 3 29 29 H 1.09003 * 109.47263 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47551 * 300.00297 * 1 2 3 31 31 H 1.09006 * 109.46735 * 119.99878 * 2 1 3 32 32 H 1.07994 * 120.02992 * 359.97438 * 5 4 3 33 33 H 1.07995 * 119.96949 * 180.27442 * 6 5 4 34 34 H 1.09004 * 109.46996 * 240.01695 * 8 7 6 35 35 H 0.96697 * 114.00011 * 180.02562 * 9 8 7 36 36 H 1.48498 * 109.99669 * 60.00622 * 10 8 7 37 37 H 1.48500 * 109.99848 * 181.32117 * 10 8 7 38 38 H 1.08002 * 119.97546 * 180.02562 * 11 7 6 39 39 H 1.08001 * 120.02705 * 179.97438 * 12 11 7 40 40 H 0.96997 * 119.99805 * 0.27921 * 15 13 2 41 41 H 1.08998 * 113.60969 * 203.66216 * 18 16 15 42 42 H 1.08993 * 113.61423 * 334.56310 * 18 16 15 43 43 H 1.09001 * 109.47382 * 207.50205 * 21 19 18 44 44 H 1.08995 * 109.47381 * 327.50360 * 21 19 18 45 45 H 1.08000 * 125.95993 * 0.03738 * 23 22 21 46 46 H 1.08006 * 125.52114 * 179.73123 * 25 24 23 47 47 H 1.09002 * 113.61853 * 25.43461 * 27 16 15 48 48 H 1.08999 * 113.61573 * 156.33661 * 27 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9645 1.2062 5 6 2.6775 3.2281 1.2931 6 6 2.7783 3.8556 2.5197 7 6 2.3254 3.2211 3.6615 8 6 2.4418 3.9055 4.9991 9 8 1.1404 4.0659 5.5670 10 14 3.2314 5.5779 4.7741 11 6 1.7659 1.9593 3.5783 12 6 1.6577 1.3298 2.3534 13 6 2.0324 -0.7104 -1.2304 14 8 2.7296 -0.1210 -2.0287 15 7 1.7114 -2.0024 -1.4409 16 6 2.2047 -2.6947 -2.6339 17 1 2.4478 -2.0129 -3.4489 18 6 3.3100 -3.7219 -2.3372 19 6 2.1880 -4.7543 -2.1369 20 1 1.8156 -4.8033 -1.1137 21 6 2.5120 -6.1320 -2.7180 22 7 3.2295 -6.9271 -1.7184 23 6 2.8856 -8.1423 -1.2573 24 7 3.7822 -8.5118 -0.3790 25 6 4.7049 -7.5597 -0.2471 26 7 4.4098 -6.5689 -1.0470 27 6 1.3266 -3.8814 -3.0648 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 1.8933 -0.5139 0.8901 32 1 3.0357 3.7223 0.4021 33 1 3.2149 4.8411 2.5873 34 1 3.0566 3.2998 5.6649 35 1 1.1390 4.5009 6.4306 36 1 2.4024 6.4132 3.8684 37 1 3.3810 6.2500 6.0898 38 1 1.4123 1.4658 4.4716 39 1 1.2210 0.3441 2.2890 40 1 1.1537 -2.4738 -0.8024 41 1 3.9505 -3.9337 -3.1934 42 1 3.8731 -3.5073 -1.4290 43 1 1.5859 -6.6390 -2.9890 44 1 3.1350 -6.0151 -3.6046 45 1 2.0215 -8.7146 -1.5608 46 1 5.5581 -7.5999 0.4140 47 1 0.2884 -3.7956 -2.7440 48 1 1.4248 -4.1368 -4.1199 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:27 Heat of formation + Delta-G solvation = 54.727548 kcal Electronic energy + Delta-G solvation = -30945.680731 eV Core-core repulsion = 26585.147880 eV Total energy + Delta-G solvation = -4360.532850 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.95651 -41.91684 -41.06276 -39.78240 -38.84484 -37.36641 -35.51769 -34.33361 -32.90047 -32.13388 -32.12264 -31.45774 -29.03380 -26.76937 -26.70087 -25.70807 -24.56401 -24.00042 -22.83496 -22.53076 -22.34194 -21.54829 -20.40366 -19.48524 -18.73221 -18.48544 -18.14186 -17.41458 -16.91276 -16.85064 -16.76108 -16.64603 -16.15109 -15.93995 -15.86699 -15.61125 -15.31259 -15.17488 -15.01286 -14.61328 -14.44448 -14.38708 -14.07667 -13.98828 -13.91869 -13.57471 -13.46528 -13.36618 -13.11866 -12.95236 -12.82559 -12.39026 -12.26985 -12.19078 -11.89577 -11.75013 -11.73262 -11.26721 -11.00195 -10.94440 -10.76702 -10.53855 -10.49733 -10.19738 -10.07196 -9.23866 -4.93585 0.20815 0.29831 0.73566 1.29900 1.33125 1.43754 1.49061 1.58125 1.93572 2.03734 2.43291 2.58506 3.31245 3.38528 3.39056 3.45367 3.56306 3.60396 3.65467 3.71840 3.78333 3.82385 3.86253 3.89662 3.98273 4.14457 4.22641 4.24179 4.30006 4.44110 4.46578 4.54457 4.59263 4.60414 4.63978 4.67522 4.76791 4.83091 4.95825 4.98380 5.03702 5.04761 5.12462 5.14914 5.25199 5.34693 5.46508 5.48229 5.51512 5.64085 5.98224 6.21031 6.38360 6.59361 7.03223 7.16678 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.064 3.936 3 O -0.311 6.311 4 C 0.119 3.881 5 C -0.158 4.158 6 C -0.079 4.079 7 C -0.124 4.124 8 C -0.076 4.076 9 O -0.558 6.558 10 Si 0.752 3.248 11 C -0.058 4.058 12 C -0.208 4.208 13 C 0.519 3.481 14 O -0.567 6.567 15 N -0.691 5.691 16 C 0.108 3.892 17 H 0.084 0.916 18 C -0.139 4.139 19 C -0.109 4.109 20 H 0.093 0.907 21 C 0.130 3.870 22 N -0.377 5.377 23 C 0.256 3.744 24 N -0.586 5.586 25 C 0.182 3.818 26 N -0.344 5.344 27 C -0.112 4.112 28 H 0.062 0.938 29 H 0.111 0.889 30 H 0.082 0.918 31 H 0.123 0.877 32 H 0.137 0.863 33 H 0.147 0.853 34 H 0.097 0.903 35 H 0.395 0.605 36 H -0.301 1.301 37 H -0.284 1.284 38 H 0.141 0.859 39 H 0.154 0.846 40 H 0.418 0.582 41 H 0.090 0.910 42 H 0.048 0.952 43 H 0.145 0.855 44 H 0.094 0.906 45 H 0.259 0.741 46 H 0.228 0.772 47 H 0.099 0.901 48 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.654 -5.174 0.699 6.995 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.004 3.996 3 O -0.224 6.224 4 C 0.074 3.926 5 C -0.177 4.177 6 C -0.096 4.096 7 C -0.124 4.124 8 C -0.185 4.185 9 O -0.368 6.368 10 Si 0.658 3.342 11 C -0.076 4.076 12 C -0.227 4.227 13 C 0.305 3.695 14 O -0.445 6.445 15 N -0.344 5.344 16 C 0.002 3.998 17 H 0.102 0.898 18 C -0.178 4.178 19 C -0.128 4.128 20 H 0.112 0.888 21 C 0.009 3.991 22 N -0.168 5.168 23 C -0.040 4.040 24 N -0.314 5.314 25 C -0.120 4.120 26 N -0.172 5.172 27 C -0.151 4.151 28 H 0.082 0.918 29 H 0.129 0.871 30 H 0.101 0.899 31 H 0.140 0.860 32 H 0.155 0.845 33 H 0.164 0.836 34 H 0.115 0.885 35 H 0.245 0.755 36 H -0.229 1.229 37 H -0.211 1.211 38 H 0.158 0.842 39 H 0.172 0.828 40 H 0.255 0.745 41 H 0.108 0.892 42 H 0.067 0.933 43 H 0.162 0.838 44 H 0.112 0.888 45 H 0.275 0.725 46 H 0.244 0.756 47 H 0.117 0.883 48 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -3.982 -3.725 -0.481 5.473 hybrid contribution -0.893 -0.074 1.192 1.491 sum -4.874 -3.799 0.711 6.220 Atomic orbital electron populations 1.22372 0.90410 1.05740 1.04399 1.22408 0.97241 0.82234 0.97669 1.86180 1.81521 1.26894 1.27837 1.19247 0.95982 0.93175 0.84246 1.20566 1.03886 0.94145 0.99110 1.20932 0.98204 0.99493 0.90971 1.19437 1.03154 0.95827 0.93965 1.24846 0.88928 1.10312 0.94411 1.86535 1.27832 1.82365 1.40034 0.94238 0.87357 0.73648 0.78941 1.21001 0.95129 0.93839 0.97621 1.21516 1.06619 1.02627 0.91893 1.20500 0.79604 0.82504 0.86889 1.90748 1.38798 1.67152 1.47781 1.45386 1.53134 1.10152 1.25760 1.21956 0.96605 0.93537 0.87675 0.89810 1.23403 0.96634 0.95783 1.01956 1.22785 0.97240 0.92354 1.00462 0.88837 1.22266 0.97467 0.91155 0.88182 1.50778 1.18481 1.15315 1.32246 1.26905 0.99733 0.85959 0.91413 1.70544 1.06508 1.31912 1.22401 1.26416 0.99874 0.87316 0.98415 1.78022 1.01345 1.24745 1.13087 1.23283 0.99113 0.91278 1.01404 0.91846 0.87074 0.89915 0.85983 0.84466 0.83591 0.88500 0.75502 1.22900 1.21144 0.84160 0.82805 0.74456 0.89160 0.93278 0.83765 0.88754 0.72547 0.75611 0.88293 0.86302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.87 9.07 71.98 0.65 1.52 16 2 C 0.06 0.02 2.64 29.85 0.08 0.10 16 3 O -0.31 -2.56 9.33 -73.41 -0.69 -3.25 16 4 C 0.12 0.72 6.60 22.51 0.15 0.87 16 5 C -0.16 -0.94 9.99 22.37 0.22 -0.72 16 6 C -0.08 -0.27 8.66 22.25 0.19 -0.08 16 7 C -0.12 -0.40 5.42 -19.85 -0.11 -0.50 16 8 C -0.08 0.01 2.81 71.24 0.20 0.21 16 9 O -0.56 -1.17 12.74 -148.98 -1.90 -3.07 16 10 Si 0.75 -0.61 29.78 68.60 2.04 1.44 16 11 C -0.06 -0.13 9.60 22.26 0.21 0.08 16 12 C -0.21 -0.35 8.24 22.37 0.18 -0.17 16 13 C 0.52 2.33 7.23 87.66 0.63 2.97 16 14 O -0.57 -8.89 16.10 16.03 0.26 -8.63 16 15 N -0.69 2.46 5.16 -440.05 -2.27 0.19 16 16 C 0.11 -0.35 4.32 45.52 0.20 -0.15 16 17 H 0.08 0.19 7.46 -2.39 -0.02 0.17 16 18 C -0.14 0.32 7.43 31.12 0.23 0.56 16 19 C -0.11 0.97 3.73 -10.27 -0.04 0.93 16 20 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 21 C 0.13 -1.30 6.39 86.38 0.55 -0.75 16 22 N -0.38 0.88 3.69 -352.05 -1.30 -0.42 16 23 C 0.26 -0.75 12.63 180.36 2.28 1.53 16 24 N -0.59 -2.68 11.19 -203.99 -2.28 -4.96 16 25 C 0.18 0.79 13.03 180.77 2.36 3.15 16 26 N -0.34 -1.59 12.57 -61.24 -0.77 -2.36 16 27 C -0.11 1.29 7.39 31.12 0.23 1.52 16 28 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 29 H 0.11 -1.33 7.58 -2.39 -0.02 -1.35 16 30 H 0.08 -0.42 6.91 -2.39 -0.02 -0.44 16 31 H 0.12 -0.56 6.31 -2.38 -0.02 -0.57 16 32 H 0.14 0.67 8.06 -2.91 -0.02 0.65 16 33 H 0.15 -0.06 4.87 -2.91 -0.01 -0.08 16 34 H 0.10 -0.43 7.96 -2.39 -0.02 -0.45 16 35 H 0.39 -2.31 8.74 -74.06 -0.65 -2.96 16 36 H -0.30 -2.10 7.11 99.48 0.71 -1.39 16 37 H -0.28 -0.84 7.11 99.48 0.71 -0.13 16 38 H 0.14 -0.10 8.06 -2.91 -0.02 -0.12 16 39 H 0.15 -0.65 5.43 -2.91 -0.02 -0.66 16 40 H 0.42 -4.39 8.13 -92.71 -0.75 -5.14 16 41 H 0.09 -0.15 7.90 -2.39 -0.02 -0.17 16 42 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 43 H 0.14 -2.56 8.09 -2.39 -0.02 -2.58 16 44 H 0.09 -0.92 7.84 -2.39 -0.02 -0.94 16 45 H 0.26 -3.43 8.06 -2.91 -0.02 -3.45 16 46 H 0.23 -0.17 8.06 -2.91 -0.02 -0.19 16 47 H 0.10 -1.40 8.14 -2.39 -0.02 -1.42 16 48 H 0.12 -1.66 8.10 -2.39 -0.02 -1.68 16 Total: 0.00 -34.59 400.09 0.97 -33.63 By element: Atomic # 1 Polarization: -23.28 SS G_CDS: -0.35 Total: -23.63 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: 8.23 Total: 11.07 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -6.62 Total: -7.55 kcal Atomic # 8 Polarization: -12.62 SS G_CDS: -2.33 Total: -14.95 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: 2.04 Total: 1.44 kcal Total: -34.59 0.97 -33.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.353 kcal (2) G-P(sol) polarization free energy of solvation -34.595 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.969 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.626 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds