Wall clock time and date at job start Sun Mar 7 2021 04:38:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.35459 * 126.06607 * 244.69370 * 4 2 1 6 6 N 1.35536 * 108.86774 * 179.83005 * 5 4 2 7 7 C 1.37653 * 108.64748 * 0.42711 * 6 5 4 8 8 C 1.46673 * 126.23440 * 179.77175 * 7 6 5 9 9 O 1.21696 * 119.99725 * 179.97438 * 8 7 6 10 10 N 1.34771 * 120.00030 * 359.96031 * 8 7 6 11 11 C 1.46505 * 119.99881 * 179.97438 * 10 8 7 12 12 H 1.08997 * 112.85320 * 336.19943 * 11 10 8 13 13 C 1.53779 * 113.61165 * 107.51070 * 11 10 8 14 14 C 1.53774 * 87.08523 * 89.11323 * 13 11 10 15 15 H 1.08991 * 113.61777 * 270.88128 * 14 13 11 16 16 C 1.52998 * 113.61526 * 139.97693 * 14 13 11 17 17 N 1.46503 * 109.47160 * 87.50358 * 16 14 13 18 18 C 1.34428 * 126.82369 * 124.99553 * 17 16 14 19 19 N 1.30829 * 108.07690 * 179.97438 * 18 17 16 20 20 C 1.33246 * 109.83090 * 0.02562 * 19 18 17 21 21 N 1.30711 * 108.94170 * 359.74466 * 20 19 18 22 22 C 1.53782 * 113.61128 * 205.00499 * 11 10 8 23 23 C 1.37873 * 107.52992 * 359.74279 * 7 6 5 24 24 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 25 25 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 26 26 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 27 27 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 28 28 H 1.07996 * 125.56279 * 359.97438 * 5 4 2 29 29 H 0.97001 * 125.67899 * 180.17629 * 6 5 4 30 30 H 0.96998 * 120.00045 * 0.02562 * 10 8 7 31 31 H 1.09010 * 113.61048 * 203.66539 * 13 11 10 32 32 H 1.09004 * 113.61646 * 334.56057 * 13 11 10 33 33 H 1.09000 * 109.47330 * 207.50607 * 16 14 13 34 34 H 1.09000 * 109.47543 * 327.50630 * 16 14 13 35 35 H 1.08002 * 125.95876 * 0.02562 * 18 17 16 36 36 H 1.07991 * 125.52686 * 179.97438 * 20 19 18 37 37 H 1.08993 * 113.61929 * 25.43241 * 22 11 10 38 38 H 1.08997 * 113.61460 * 156.33776 * 22 11 10 39 39 H 1.08005 * 126.45407 * 180.02562 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6384 -0.1511 2.2414 6 7 2.9053 -1.1029 3.1687 7 6 2.3685 -2.2963 2.7415 8 6 2.4360 -3.5797 3.4483 9 8 1.9185 -4.5690 2.9640 10 7 3.0713 -3.6635 4.6339 11 6 3.1382 -4.9453 5.3402 12 1 2.3353 -5.6264 5.0582 13 6 4.5337 -5.5907 5.3143 14 6 4.8348 -4.8051 6.6014 15 1 5.2489 -3.8132 6.4208 16 6 5.6317 -5.6039 7.6348 17 7 7.0647 -5.4488 7.3727 18 6 8.0008 -5.0235 8.2388 19 7 9.1549 -5.0257 7.6226 20 6 8.9963 -5.4437 6.3674 21 7 7.7343 -5.7197 6.1683 22 6 3.3190 -4.8021 6.8606 23 6 1.7553 -2.0653 1.5284 24 1 -0.3934 0.4417 -0.7651 25 1 1.7923 -0.5139 -0.8900 26 1 1.5879 2.4585 -1.2243 27 1 1.5615 2.4679 1.2085 28 1 2.9383 0.8847 2.3001 29 1 3.3963 -0.9668 3.9941 30 1 3.4836 -2.8749 5.0200 31 1 4.5176 -6.6715 5.4559 32 1 5.1412 -5.2835 4.4629 33 1 5.4031 -5.2346 8.6345 34 1 5.3619 -6.6578 7.5662 35 1 7.8299 -4.7318 9.2645 36 1 9.7835 -5.5423 5.6347 37 1 2.9458 -3.8582 7.2578 38 1 2.9708 -5.6671 7.4251 39 1 1.2363 -2.7935 0.9227 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_10543058.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:32 Heat of formation + Delta-G solvation = 107.886278 kcal Electronic energy + Delta-G solvation = -23804.483722 eV Core-core repulsion = 20138.813666 eV Total energy + Delta-G solvation = -3665.670055 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.132 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.02440 -42.48345 -41.11723 -39.26103 -37.72949 -35.52990 -34.05999 -32.60843 -32.15519 -30.76472 -29.19485 -26.93948 -26.58673 -25.06506 -23.84413 -22.92615 -22.47665 -21.29081 -20.77563 -20.49060 -19.68762 -18.42081 -18.37880 -17.33184 -17.07941 -16.79457 -16.36077 -16.15752 -15.88765 -15.52197 -15.41280 -15.06421 -14.98735 -14.74608 -14.65869 -14.45485 -14.12098 -13.93671 -13.67150 -13.32354 -13.21758 -12.97970 -12.55274 -12.41563 -11.93230 -11.86232 -11.48389 -11.15034 -10.95286 -10.76033 -10.64924 -10.40336 -10.23120 -9.92061 -9.29092 -4.97621 0.41378 0.65414 1.27821 1.29416 1.53055 1.59140 1.88511 1.97813 1.99067 2.02895 2.35733 3.05160 3.21417 3.36402 3.39962 3.47685 3.56720 3.76264 3.81140 3.90283 3.93899 3.94774 4.06932 4.16397 4.27388 4.35476 4.44226 4.51540 4.58130 4.67672 4.76352 4.88389 4.94512 4.97567 5.07801 5.26343 5.40482 5.46461 5.61622 5.78552 5.80346 6.19778 6.38463 6.55445 7.10489 7.12053 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.041 4.041 3 Si 0.680 3.320 4 C -0.164 4.164 5 C 0.039 3.961 6 N -0.536 5.536 7 C -0.060 4.060 8 C 0.595 3.405 9 O -0.521 6.521 10 N -0.716 5.716 11 C 0.120 3.880 12 H 0.110 0.890 13 C -0.134 4.134 14 C -0.122 4.122 15 H 0.093 0.907 16 C 0.137 3.863 17 N -0.379 5.379 18 C 0.251 3.749 19 N -0.547 5.547 20 C 0.196 3.804 21 N -0.312 5.312 22 C -0.137 4.137 23 C -0.073 4.073 24 H 0.377 0.623 25 H 0.074 0.926 26 H -0.262 1.262 27 H -0.255 1.255 28 H 0.176 0.824 29 H 0.418 0.582 30 H 0.394 0.606 31 H 0.095 0.905 32 H 0.077 0.923 33 H 0.104 0.896 34 H 0.093 0.907 35 H 0.218 0.782 36 H 0.216 0.784 37 H 0.078 0.922 38 H 0.103 0.897 39 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.785 3.464 3.835 5.468 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.151 4.151 3 Si 0.581 3.419 4 C -0.171 4.171 5 C -0.097 4.097 6 N -0.132 5.132 7 C -0.172 4.172 8 C 0.383 3.617 9 O -0.396 6.396 10 N -0.367 5.367 11 C 0.015 3.985 12 H 0.128 0.872 13 C -0.173 4.173 14 C -0.142 4.142 15 H 0.112 0.888 16 C 0.015 3.985 17 N -0.170 5.170 18 C -0.046 4.046 19 N -0.274 5.274 20 C -0.107 4.107 21 N -0.139 5.139 22 C -0.175 4.175 23 C -0.099 4.099 24 H 0.225 0.775 25 H 0.092 0.908 26 H -0.187 1.187 27 H -0.180 1.180 28 H 0.193 0.807 29 H 0.255 0.745 30 H 0.227 0.773 31 H 0.113 0.887 32 H 0.095 0.905 33 H 0.122 0.878 34 H 0.111 0.889 35 H 0.234 0.766 36 H 0.233 0.767 37 H 0.097 0.903 38 H 0.121 0.879 39 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 1.294 3.036 3.676 4.940 hybrid contribution -0.706 0.461 0.325 0.904 sum 0.588 3.497 4.000 5.346 Atomic orbital electron populations 1.86617 1.18219 1.79930 1.49534 1.24055 0.83880 1.09971 0.97228 0.95434 0.91296 0.74658 0.80498 1.18696 1.06322 0.94275 0.97818 1.21808 1.03187 0.94593 0.90156 1.41869 1.44093 1.07895 1.19318 1.20335 1.11247 0.86003 0.99642 1.17014 0.77851 0.86712 0.80144 1.90881 1.46231 1.36197 1.66286 1.45515 1.57804 1.11657 1.21706 1.21844 0.99268 0.85757 0.91654 0.87216 1.23422 0.96080 1.00235 0.97543 1.22902 0.94877 1.00011 0.96372 0.88848 1.21920 0.74328 1.02259 0.99970 1.50603 1.08972 1.48647 1.08781 1.26127 0.84105 0.96040 0.98335 1.70567 1.25301 1.24522 1.06985 1.26080 0.93776 0.96930 0.93898 1.78101 1.07530 1.24613 1.03667 1.23365 0.94253 1.03943 0.95978 1.21217 0.98882 0.95723 0.94076 0.77512 0.90848 1.18677 1.17991 0.80675 0.74468 0.77282 0.88694 0.90460 0.87759 0.88854 0.76603 0.76734 0.90284 0.87859 0.83205 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.02 12.86 -35.23 -0.45 -1.47 16 2 C -0.04 -0.01 3.01 36.01 0.11 0.10 16 3 Si 0.68 -1.00 30.60 -169.99 -5.20 -6.21 16 4 C -0.16 -0.22 5.46 -105.02 -0.57 -0.80 16 5 C 0.04 -0.04 10.45 -16.91 -0.18 -0.22 16 6 N -0.54 0.93 5.99 -9.39 -0.06 0.88 16 7 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 8 C 0.59 1.53 7.79 -12.86 -0.10 1.43 16 9 O -0.52 -3.47 16.48 5.19 0.09 -3.38 16 10 N -0.72 0.80 5.26 -54.32 -0.29 0.51 16 11 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 12 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 13 C -0.13 0.19 7.43 -25.92 -0.19 -0.01 16 14 C -0.12 0.44 3.73 -89.81 -0.34 0.11 16 15 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 16 C 0.14 -0.53 6.39 -4.04 -0.03 -0.56 16 17 N -0.38 0.23 3.69 -62.63 -0.23 0.00 16 18 C 0.25 -0.18 12.63 -90.66 -1.14 -1.32 16 19 N -0.55 -1.27 11.19 -15.83 -0.18 -1.45 16 20 C 0.20 0.34 13.03 -91.81 -1.20 -0.85 16 21 N -0.31 -0.64 12.57 29.29 0.37 -0.28 16 22 C -0.14 0.60 7.39 -25.91 -0.19 0.41 16 23 C -0.07 -0.22 10.59 -39.12 -0.41 -0.64 16 24 H 0.38 -0.82 8.74 45.56 0.40 -0.42 16 25 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 26 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 27 H -0.26 -0.31 7.11 56.52 0.40 0.10 16 28 H 0.18 -0.70 6.20 -52.49 -0.33 -1.03 16 29 H 0.42 -2.20 8.19 -40.82 -0.33 -2.54 16 30 H 0.39 -1.54 7.83 -40.82 -0.32 -1.86 16 31 H 0.09 -0.13 7.90 -51.92 -0.41 -0.54 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.10 -0.70 8.09 -51.93 -0.42 -1.12 16 34 H 0.09 -0.37 7.84 -51.93 -0.41 -0.78 16 35 H 0.22 -1.10 8.06 -52.49 -0.42 -1.53 16 36 H 0.22 -0.24 8.06 -52.49 -0.42 -0.66 16 37 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 38 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 39 H 0.15 0.56 8.06 -52.48 -0.42 0.14 16 LS Contribution 339.04 15.07 5.11 5.11 Total: 0.00 -12.79 339.04 -10.73 -23.52 By element: Atomic # 1 Polarization: -8.97 SS G_CDS: -4.77 Total: -13.74 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -5.11 Total: -3.49 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.38 Total: -0.34 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -0.37 Total: -4.86 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.20 Total: -6.21 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -12.79 -10.73 -23.52 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_10543058.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.405 kcal (2) G-P(sol) polarization free energy of solvation -12.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.613 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.727 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.519 kcal (6) G-S(sol) free energy of system = (1) + (5) 107.886 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds