Wall clock time and date at job start Sun Mar 7 2021 04:38:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37650 * 125.67952 * 2 1 4 4 C 1.46680 * 126.23662 * 0.02562 * 3 2 1 5 5 O 1.21700 * 119.99437 * 5.28912 * 4 3 2 6 6 N 1.34770 * 120.00382 * 185.28752 * 4 3 2 7 7 C 1.46502 * 120.00140 * 174.89071 * 6 4 3 8 8 H 1.09003 * 112.90692 * 336.25361 * 7 6 4 9 9 C 1.53780 * 113.61457 * 107.50312 * 7 6 4 10 10 C 1.53788 * 87.07984 * 89.11636 * 9 7 6 11 11 H 1.09000 * 113.69066 * 270.87440 * 10 9 7 12 12 C 1.52994 * 113.61061 * 139.97898 * 10 9 7 13 13 N 1.46504 * 109.47107 * 87.50701 * 12 10 9 14 14 C 1.34426 * 126.82282 * 124.99542 * 13 12 10 15 15 N 1.30833 * 108.07408 * 180.27864 * 14 13 12 16 16 C 1.33239 * 109.83264 * 359.59944 * 15 14 13 17 17 N 1.30716 * 108.94367 * 0.40852 * 16 15 14 18 18 C 1.53782 * 113.61418 * 205.00408 * 7 6 4 19 19 C 1.37876 * 107.53483 * 180.28701 * 3 2 1 20 20 C 1.39836 * 107.08090 * 359.59084 * 19 3 2 21 21 C 1.35455 * 107.86839 * 0.41251 * 20 19 3 22 22 C 1.50694 * 125.56483 * 179.77872 * 21 20 19 23 23 O 1.42901 * 109.47115 * 149.96261 * 22 21 20 24 24 Si 1.86306 * 109.47367 * 29.96181 * 22 21 20 25 25 H 1.09002 * 109.47246 * 95.75227 * 1 2 3 26 26 H 1.09002 * 109.46930 * 215.75720 * 1 2 3 27 27 H 1.08997 * 109.46751 * 335.75405 * 1 2 3 28 28 H 0.97004 * 119.99924 * 354.89755 * 6 4 3 29 29 H 1.09001 * 113.61155 * 334.56981 * 9 7 6 30 30 H 1.08996 * 113.61622 * 203.66832 * 9 7 6 31 31 H 1.08998 * 109.47447 * 327.50709 * 12 10 9 32 32 H 1.08998 * 109.47464 * 207.50153 * 12 10 9 33 33 H 1.07993 * 125.96503 * 0.02562 * 14 13 12 34 34 H 1.07997 * 125.53301 * 180.12400 * 16 15 14 35 35 H 1.09001 * 113.61378 * 156.33833 * 18 7 6 36 36 H 1.08999 * 113.69082 * 25.44421 * 18 7 6 37 37 H 1.07995 * 126.46098 * 179.70398 * 19 3 2 38 38 H 1.08002 * 126.06751 * 180.14061 * 20 19 3 39 39 H 1.08994 * 109.47415 * 269.96055 * 22 21 20 40 40 H 0.96698 * 114.00483 * 180.02562 * 23 22 21 41 41 H 1.48497 * 109.99718 * 59.99559 * 24 22 21 42 42 H 1.48496 * 109.99958 * 181.31684 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8125 2.5125 0.0005 5 8 0.6260 2.7650 0.0982 6 7 2.7080 3.5139 -0.1071 7 6 2.2470 4.8999 -0.2193 8 1 1.2327 4.9793 -0.6104 9 6 2.4842 5.7328 1.0515 10 6 3.8618 6.0876 0.4670 11 1 4.6472 5.3819 0.7375 12 6 4.2677 7.5448 0.6958 13 7 4.9426 7.6663 1.9905 14 6 6.1623 8.1837 2.2178 15 7 6.4039 8.1048 3.5012 16 6 5.3631 7.5534 4.1241 17 7 4.4441 7.2644 3.2405 18 6 3.2521 5.8286 -0.9209 19 6 3.5780 0.6888 -0.0066 20 6 3.5521 -0.7094 -0.0010 21 6 2.2554 -1.1010 -0.0006 22 6 1.7708 -2.5279 -0.0001 23 8 0.5134 -2.6037 0.6746 24 14 3.0122 -3.6051 0.8772 25 1 -0.3634 -0.1030 -1.0225 26 1 -0.3633 -0.8340 0.6005 27 1 -0.3633 0.9370 0.4220 28 1 3.6578 3.3169 -0.1104 29 1 2.5368 5.1353 1.9616 30 1 1.8155 6.5886 1.1438 31 1 3.3784 8.1751 0.6892 32 1 4.9441 7.8625 -0.0976 33 1 6.8283 8.5895 1.4709 34 1 5.2922 7.3702 5.1860 35 1 2.7934 6.7106 -1.3677 36 1 3.9251 5.3097 -1.6035 37 1 4.4584 1.3143 -0.0128 38 1 4.4132 -1.3613 -0.0018 39 1 1.6531 -2.8720 -1.0276 40 1 0.1409 -3.4952 0.7135 41 1 3.1817 -3.1462 2.2792 42 1 2.5612 -5.0198 0.8568 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_10803936.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:40 Heat of formation + Delta-G solvation = 112.142704 kcal Electronic energy + Delta-G solvation = -26100.483180 eV Core-core repulsion = 22279.460079 eV Total energy + Delta-G solvation = -3821.023102 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.96412 -42.51092 -41.07311 -39.21958 -37.92592 -35.50777 -34.23572 -33.42116 -32.09721 -31.45117 -29.20698 -27.39517 -26.86531 -26.83254 -24.59111 -23.20493 -22.86678 -22.41986 -21.60170 -20.43007 -20.20727 -18.83008 -18.54128 -18.25616 -17.24179 -16.92025 -16.80343 -16.54182 -16.19369 -16.03406 -15.63600 -15.53526 -15.15249 -15.08423 -14.69297 -14.55121 -14.36259 -14.17116 -13.96925 -13.66466 -13.60972 -13.20141 -13.08890 -12.97406 -12.92370 -12.52575 -12.32863 -12.07043 -11.78727 -11.41367 -11.03333 -10.89305 -10.74890 -10.70124 -10.58750 -10.12951 -9.67659 -9.01675 -5.00396 0.44531 0.71460 1.10932 1.34097 1.53310 1.64053 1.76391 1.96491 2.08688 2.38096 2.41492 2.95123 3.12323 3.29078 3.42124 3.47920 3.61680 3.64547 3.77843 3.87942 3.97838 4.00617 4.07926 4.23203 4.25606 4.39543 4.41923 4.47739 4.51705 4.57728 4.61228 4.68234 4.84590 4.93951 5.03718 5.04624 5.05358 5.17511 5.32503 5.50621 5.52369 5.76211 5.84712 6.04719 6.19693 6.24777 6.46564 7.17851 7.19557 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.055 3.945 2 N -0.387 5.387 3 C -0.056 4.056 4 C 0.595 3.405 5 O -0.544 6.544 6 N -0.702 5.702 7 C 0.123 3.877 8 H 0.107 0.893 9 C -0.135 4.135 10 C -0.123 4.123 11 H 0.096 0.904 12 C 0.137 3.863 13 N -0.378 5.378 14 C 0.251 3.749 15 N -0.547 5.547 16 C 0.196 3.804 17 N -0.312 5.312 18 C -0.136 4.136 19 C -0.134 4.134 20 C -0.201 4.201 21 C 0.059 3.941 22 C -0.057 4.057 23 O -0.541 6.541 24 Si 0.714 3.286 25 H 0.070 0.930 26 H 0.105 0.895 27 H 0.103 0.897 28 H 0.403 0.597 29 H 0.077 0.923 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.104 0.896 33 H 0.218 0.782 34 H 0.216 0.784 35 H 0.102 0.898 36 H 0.081 0.919 37 H 0.146 0.854 38 H 0.154 0.846 39 H 0.082 0.918 40 H 0.384 0.616 41 H -0.253 1.253 42 H -0.259 1.259 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.529 -1.325 -5.609 6.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.059 5.059 3 C -0.170 4.170 4 C 0.384 3.616 5 O -0.422 6.422 6 N -0.353 5.353 7 C 0.017 3.983 8 H 0.125 0.875 9 C -0.174 4.174 10 C -0.142 4.142 11 H 0.114 0.886 12 C 0.015 3.985 13 N -0.170 5.170 14 C -0.046 4.046 15 N -0.274 5.274 16 C -0.107 4.107 17 N -0.139 5.139 18 C -0.175 4.175 19 C -0.160 4.160 20 C -0.225 4.225 21 C -0.059 4.059 22 C -0.165 4.165 23 O -0.349 6.349 24 Si 0.613 3.387 25 H 0.088 0.912 26 H 0.123 0.877 27 H 0.122 0.878 28 H 0.239 0.761 29 H 0.095 0.905 30 H 0.112 0.888 31 H 0.111 0.889 32 H 0.123 0.877 33 H 0.234 0.766 34 H 0.232 0.768 35 H 0.120 0.880 36 H 0.100 0.900 37 H 0.164 0.836 38 H 0.172 0.828 39 H 0.100 0.900 40 H 0.233 0.767 41 H -0.176 1.176 42 H -0.184 1.184 Dipole moment (debyes) X Y Z Total from point charges 2.053 -1.249 -4.570 5.163 hybrid contribution -0.630 -0.309 -0.163 0.720 sum 1.423 -1.557 -4.733 5.182 Atomic orbital electron populations 1.22587 0.75541 1.06539 1.03838 1.43728 1.07125 1.03980 1.51078 1.19967 0.90579 0.87411 1.19036 1.16957 0.85476 0.83496 0.75683 1.90789 1.16418 1.84717 1.50308 1.45248 1.09690 1.05320 1.75071 1.21814 0.99421 0.79817 0.97212 0.87541 1.23421 0.95411 1.00250 0.98272 1.22912 0.98521 0.95276 0.97458 0.88593 1.21922 0.98708 0.98094 0.79743 1.50601 1.13917 1.45061 1.07383 1.26121 0.87225 0.96005 0.95237 1.70560 1.28874 1.23646 1.04332 1.26069 0.87241 0.96401 1.01004 1.78104 1.23234 1.23545 0.89031 1.23361 0.98315 1.00132 0.95680 1.21237 0.94294 0.95086 1.05431 1.20465 0.94596 0.95248 1.12155 1.19983 0.90613 0.86956 1.08364 1.24599 0.93228 0.97030 1.01691 1.86492 1.34583 1.34372 1.79493 0.94486 0.85763 0.76116 0.82374 0.91157 0.87675 0.87841 0.76140 0.90473 0.88841 0.88949 0.87738 0.76590 0.76780 0.87962 0.90047 0.83591 0.82829 0.90009 0.76675 1.17641 1.18362 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.16 10.32 59.85 0.62 0.78 16 2 N -0.39 -1.37 3.16 -115.62 -0.37 -1.73 16 3 C -0.06 -0.17 6.89 -81.98 -0.56 -0.74 16 4 C 0.60 2.05 7.77 -12.86 -0.10 1.95 16 5 O -0.54 -3.56 14.18 5.19 0.07 -3.49 16 6 N -0.70 0.03 5.25 -54.32 -0.29 -0.25 16 7 C 0.12 -0.11 4.29 -67.12 -0.29 -0.39 16 8 H 0.11 0.08 7.53 -51.93 -0.39 -0.31 16 9 C -0.13 0.09 7.43 -25.92 -0.19 -0.10 16 10 C -0.12 0.36 3.73 -89.80 -0.33 0.02 16 11 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 12 C 0.14 -0.46 6.39 -4.04 -0.03 -0.49 16 13 N -0.38 0.01 3.69 -62.63 -0.23 -0.23 16 14 C 0.25 -0.05 12.63 -90.66 -1.14 -1.19 16 15 N -0.55 -1.58 11.19 -15.83 -0.18 -1.75 16 16 C 0.20 0.47 13.03 -91.81 -1.20 -0.73 16 17 N -0.31 -0.85 12.57 29.29 0.37 -0.48 16 18 C -0.14 0.54 7.39 -25.92 -0.19 0.35 16 19 C -0.13 -0.11 10.36 -39.12 -0.41 -0.52 16 20 C -0.20 -0.11 9.37 -39.98 -0.37 -0.48 16 21 C 0.06 0.11 6.18 -81.95 -0.51 -0.39 16 22 C -0.06 0.03 2.98 36.00 0.11 0.14 16 23 O -0.54 -0.01 9.81 -35.23 -0.35 -0.35 16 24 Si 0.71 -1.11 31.10 -169.99 -5.29 -6.40 16 25 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 26 H 0.11 0.24 5.48 -51.93 -0.28 -0.04 16 27 H 0.10 0.45 5.92 -51.93 -0.31 0.14 16 28 H 0.40 -0.93 7.60 -40.82 -0.31 -1.24 16 29 H 0.08 0.15 8.14 -51.93 -0.42 -0.27 16 30 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 31 H 0.09 -0.33 7.84 -51.93 -0.41 -0.73 16 32 H 0.10 -0.66 8.09 -51.93 -0.42 -1.08 16 33 H 0.22 -1.01 8.06 -52.49 -0.42 -1.43 16 34 H 0.22 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 36 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 37 H 0.15 -0.33 7.45 -52.49 -0.39 -0.72 16 38 H 0.15 -0.40 6.85 -52.49 -0.36 -0.76 16 39 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 40 H 0.38 -1.55 8.74 45.56 0.40 -1.15 16 41 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 42 H -0.26 -0.03 7.11 56.52 0.40 0.38 16 LS Contribution 352.04 15.07 5.31 5.31 Total: 0.00 -11.87 352.04 -10.99 -22.87 By element: Atomic # 1 Polarization: -6.22 SS G_CDS: -5.45 Total: -11.67 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -4.60 Total: -1.80 kcal Atomic # 7 Polarization: -3.76 SS G_CDS: -0.69 Total: -4.45 kcal Atomic # 8 Polarization: -3.57 SS G_CDS: -0.27 Total: -3.84 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.29 Total: -6.40 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -11.87 -10.99 -22.87 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_10803936.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 135.011 kcal (2) G-P(sol) polarization free energy of solvation -11.874 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 123.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.994 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.868 kcal (6) G-S(sol) free energy of system = (1) + (5) 112.143 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds