Wall clock time and date at job start Sun Mar 7 2021 04:38:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.35459 * 125.56338 * 2 1 4 4 C 1.50699 * 126.06687 * 0.02562 * 3 2 1 5 5 O 1.42894 * 109.47188 * 210.01675 * 4 3 2 6 6 Si 1.86298 * 109.46950 * 330.02348 * 4 3 2 7 7 C 1.39837 * 107.86344 * 180.27889 * 3 2 1 8 8 C 1.50701 * 126.45453 * 179.76116 * 7 3 2 9 9 C 1.37877 * 107.08406 * 359.61714 * 7 3 2 10 10 C 1.46680 * 126.22710 * 180.13382 * 9 7 3 11 11 O 1.21686 * 120.00232 * 0.32157 * 10 9 7 12 12 N 1.34778 * 119.99457 * 180.31194 * 10 9 7 13 13 C 1.46502 * 119.99956 * 180.02562 * 12 10 9 14 14 H 1.09003 * 112.84972 * 23.80620 * 13 12 10 15 15 C 1.53779 * 113.61456 * 155.00313 * 13 12 10 16 16 C 1.53779 * 87.08060 * 89.11750 * 15 13 12 17 17 H 1.08999 * 113.61421 * 270.88408 * 16 15 13 18 18 C 1.53004 * 113.61547 * 140.06335 * 16 15 13 19 19 N 1.46497 * 109.47131 * 174.99933 * 18 16 15 20 20 C 1.34432 * 126.82096 * 125.00315 * 19 18 16 21 21 N 1.30831 * 108.07461 * 179.97438 * 20 19 18 22 22 C 1.33233 * 109.83026 * 0.02562 * 21 20 19 23 23 N 1.30706 * 108.94861 * 359.75164 * 22 21 20 24 24 C 1.53783 * 87.08437 * 25.43153 * 16 15 13 25 25 N 1.35532 * 125.56646 * 180.02562 * 2 1 3 26 26 H 1.08999 * 109.47633 * 89.99457 * 1 2 3 27 27 H 1.09007 * 109.47107 * 209.99634 * 1 2 3 28 28 H 1.08998 * 109.47405 * 329.98908 * 1 2 3 29 29 H 1.09006 * 109.46662 * 90.01944 * 4 3 2 30 30 H 0.96709 * 113.99337 * 60.00344 * 5 4 3 31 31 H 1.48506 * 109.99834 * 180.02562 * 6 4 3 32 32 H 1.48502 * 110.00011 * 301.31529 * 6 4 3 33 33 H 1.08992 * 109.47148 * 90.00646 * 8 7 3 34 34 H 1.09002 * 109.46665 * 210.00258 * 8 7 3 35 35 H 1.08998 * 109.47074 * 329.99871 * 8 7 3 36 36 H 0.97002 * 120.00219 * 0.02562 * 12 10 9 37 37 H 1.09004 * 113.61377 * 203.66505 * 15 13 12 38 38 H 1.08997 * 113.61377 * 334.57213 * 15 13 12 39 39 H 1.08998 * 109.47159 * 295.00176 * 18 16 15 40 40 H 1.08993 * 109.46776 * 54.99971 * 18 16 15 41 41 H 1.08001 * 125.96297 * 359.92069 * 20 19 18 42 42 H 1.08010 * 125.52610 * 179.97438 * 22 21 20 43 43 H 1.08995 * 113.61914 * 220.01775 * 24 16 15 44 44 H 1.09006 * 113.61141 * 89.11000 * 24 16 15 45 45 H 0.97003 * 125.67949 * 359.94170 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0005 5 8 2.7766 3.3520 -0.6735 6 14 0.1799 2.6421 -0.8764 7 6 3.6269 0.6768 -0.0065 8 6 4.8485 1.5593 -0.0139 9 6 3.6121 -0.7019 -0.0015 10 6 4.7860 -1.5814 -0.0027 11 8 5.9048 -1.1029 -0.0026 12 7 4.6253 -2.9196 -0.0037 13 6 5.7977 -3.7981 -0.0043 14 1 6.6875 -3.3168 0.4016 15 6 5.5248 -5.1899 0.5901 16 6 5.1272 -5.6311 -0.8284 17 1 4.0716 -5.4786 -1.0532 18 6 5.6157 -7.0344 -1.1933 19 7 5.0890 -7.4082 -2.5082 20 6 5.7997 -7.8105 -3.5761 21 7 4.9634 -8.0503 -4.5533 22 6 3.7162 -7.8131 -4.1492 23 7 3.7411 -7.4224 -2.9022 24 6 6.0367 -4.5055 -1.3487 25 7 2.2953 -1.1025 -0.0005 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3634 -0.8901 0.5138 28 1 -0.3634 0.8899 0.5140 29 1 1.7061 2.8767 1.0284 30 1 2.9286 3.1021 -1.5953 31 1 -0.2991 4.0478 -0.8833 32 1 0.3144 2.1452 -2.2694 33 1 5.1484 1.7731 1.0119 34 1 5.6614 1.0500 -0.5314 35 1 4.6191 2.4929 -0.5276 36 1 3.7334 -3.3010 -0.0040 37 1 6.4188 -5.6865 0.9673 38 1 4.6982 -5.2069 1.3004 39 1 6.7052 -7.0438 -1.2222 40 1 5.2660 -7.7466 -0.4460 41 1 6.8736 -7.9164 -3.6200 42 1 2.8282 -7.9287 -4.7531 43 1 5.6234 -3.9701 -2.2034 44 1 7.0706 -4.8151 -1.5014 45 1 1.9834 -2.0210 -0.0001 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12297754.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:48 Heat of formation + Delta-G solvation = 97.661880 kcal Electronic energy + Delta-G solvation = -28260.047310 eV Core-core repulsion = 24282.858653 eV Total energy + Delta-G solvation = -3977.188657 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -43.04971 -42.70815 -41.19450 -39.32548 -37.85401 -35.57081 -34.16423 -33.67273 -32.91296 -32.17841 -29.45666 -29.31066 -27.40893 -27.01656 -26.35324 -24.65241 -23.04821 -22.81555 -22.42891 -20.88658 -20.53464 -20.22117 -19.43614 -18.42679 -17.58693 -17.27750 -16.92369 -16.70220 -16.63885 -16.08558 -16.04392 -15.89730 -15.48038 -15.33576 -15.15299 -14.95170 -14.66889 -14.31093 -14.16898 -14.05590 -13.93793 -13.74646 -13.68456 -13.40327 -13.24804 -13.19603 -12.94573 -12.49667 -12.37455 -12.26626 -11.92902 -11.77473 -11.67123 -11.06858 -10.96812 -10.77665 -10.62997 -10.46237 -10.25329 -9.51569 -9.00829 -4.81764 0.37758 0.63014 1.20434 1.25468 1.65691 1.67524 1.86962 1.96061 2.01073 2.08526 2.33297 3.10468 3.18927 3.23275 3.36191 3.41307 3.53637 3.61554 3.71124 3.75976 3.88151 3.95872 3.96301 4.00558 4.18069 4.29882 4.31082 4.39410 4.40963 4.41503 4.57717 4.64820 4.69990 4.71623 4.75319 4.77672 4.89706 4.92508 5.13760 5.23298 5.32792 5.40173 5.43571 5.47696 5.70615 5.77029 5.92773 6.23797 6.38724 6.54897 7.09720 7.11015 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.068 3.932 3 C -0.211 4.211 4 C -0.033 4.033 5 O -0.527 6.527 6 Si 0.653 3.347 7 C -0.039 4.039 8 C -0.100 4.100 9 C -0.069 4.069 10 C 0.595 3.405 11 O -0.519 6.519 12 N -0.718 5.718 13 C 0.125 3.875 14 H 0.110 0.890 15 C -0.136 4.136 16 C -0.124 4.124 17 H 0.103 0.897 18 C 0.138 3.862 19 N -0.377 5.377 20 C 0.254 3.746 21 N -0.547 5.547 22 C 0.199 3.801 23 N -0.320 5.320 24 C -0.147 4.147 25 N -0.535 5.535 26 H 0.088 0.912 27 H 0.087 0.913 28 H 0.102 0.898 29 H 0.113 0.887 30 H 0.374 0.626 31 H -0.254 1.254 32 H -0.261 1.261 33 H 0.066 0.934 34 H 0.075 0.925 35 H 0.082 0.918 36 H 0.394 0.606 37 H 0.103 0.897 38 H 0.079 0.921 39 H 0.105 0.895 40 H 0.092 0.908 41 H 0.218 0.782 42 H 0.217 0.783 43 H 0.072 0.928 44 H 0.095 0.905 45 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.096 -4.408 3.122 6.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C -0.051 4.051 3 C -0.218 4.218 4 C -0.144 4.144 5 O -0.334 6.334 6 Si 0.554 3.446 7 C -0.047 4.047 8 C -0.157 4.157 9 C -0.180 4.180 10 C 0.384 3.616 11 O -0.395 6.395 12 N -0.369 5.369 13 C 0.020 3.980 14 H 0.128 0.872 15 C -0.175 4.175 16 C -0.143 4.143 17 H 0.121 0.879 18 C 0.016 3.984 19 N -0.168 5.168 20 C -0.043 4.043 21 N -0.274 5.274 22 C -0.104 4.104 23 N -0.148 5.148 24 C -0.186 4.186 25 N -0.132 5.132 26 H 0.106 0.894 27 H 0.106 0.894 28 H 0.120 0.880 29 H 0.130 0.870 30 H 0.222 0.778 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.085 0.915 34 H 0.093 0.907 35 H 0.100 0.900 36 H 0.228 0.772 37 H 0.121 0.879 38 H 0.098 0.902 39 H 0.123 0.877 40 H 0.110 0.890 41 H 0.234 0.766 42 H 0.233 0.767 43 H 0.091 0.909 44 H 0.114 0.886 45 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -3.200 -3.510 3.195 5.724 hybrid contribution 0.588 -0.740 -0.664 1.156 sum -2.611 -4.250 2.531 5.593 Atomic orbital electron populations 1.20425 0.87576 1.03727 1.04203 1.20163 0.93430 0.85738 1.05727 1.19558 0.92924 0.94873 1.14419 1.24247 1.01124 0.86767 1.02274 1.86553 1.61004 1.57049 1.28746 0.95568 0.82205 0.83690 0.83166 1.19806 0.94895 0.90624 0.99382 1.20567 0.93804 0.98600 1.02752 1.20059 0.82687 0.94089 1.21200 1.17001 0.87637 0.81051 0.75946 1.90844 1.24163 1.74818 1.49646 1.45539 1.09059 1.05648 1.76612 1.21756 0.89785 0.89759 0.96745 0.87155 1.23356 1.03199 0.95235 0.95706 1.22976 1.01376 0.92826 0.97152 0.87897 1.21919 0.99099 0.96864 0.80510 1.50559 1.04668 1.49360 1.12224 1.26121 1.00285 0.95054 0.82811 1.70567 1.00779 1.25609 1.30416 1.26044 0.96442 0.96979 0.90936 1.77990 0.95625 1.25714 1.15509 1.23549 1.00311 0.96591 0.98158 1.41740 1.05315 1.08229 1.57902 0.89358 0.89392 0.87979 0.86977 0.77783 1.17957 1.18534 0.91497 0.90651 0.89982 0.77236 0.87882 0.90185 0.87683 0.88955 0.76563 0.76713 0.90939 0.88639 0.74709 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.50 8.21 36.00 0.30 0.80 16 2 C 0.07 -0.09 6.84 -81.95 -0.56 -0.65 16 3 C -0.21 -0.21 5.38 -105.02 -0.57 -0.78 16 4 C -0.03 -0.02 3.03 36.01 0.11 0.09 16 5 O -0.53 -1.04 10.19 -35.23 -0.36 -1.40 16 6 Si 0.65 -0.51 26.76 -169.99 -4.55 -5.06 16 7 C -0.04 -0.11 6.15 -104.16 -0.64 -0.75 16 8 C -0.10 -0.34 9.51 36.01 0.34 0.00 16 9 C -0.07 -0.12 7.06 -81.98 -0.58 -0.70 16 10 C 0.59 1.41 7.79 -12.85 -0.10 1.31 16 11 O -0.52 -3.04 14.41 5.20 0.07 -2.96 16 12 N -0.72 0.83 5.26 -54.32 -0.29 0.54 16 13 C 0.13 -0.23 4.32 -67.12 -0.29 -0.52 16 14 H 0.11 -0.02 7.46 -51.93 -0.39 -0.40 16 15 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 16 C -0.12 0.43 3.75 -89.81 -0.34 0.10 16 17 H 0.10 -0.20 8.01 -51.93 -0.42 -0.62 16 18 C 0.14 -0.52 6.39 -4.04 -0.03 -0.55 16 19 N -0.38 0.17 3.69 -62.63 -0.23 -0.06 16 20 C 0.25 -0.09 12.63 -90.65 -1.14 -1.23 16 21 N -0.55 -1.41 11.19 -15.83 -0.18 -1.58 16 22 C 0.20 0.35 13.03 -91.83 -1.20 -0.85 16 23 N -0.32 -0.62 12.46 29.29 0.36 -0.25 16 24 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 25 N -0.53 0.85 5.99 -5.70 -0.03 0.81 16 26 H 0.09 -0.47 7.13 -51.93 -0.37 -0.84 16 27 H 0.09 -0.58 8.14 -51.93 -0.42 -1.01 16 28 H 0.10 -0.62 5.17 -51.93 -0.27 -0.89 16 29 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 30 H 0.37 -0.10 8.47 45.56 0.39 0.28 16 31 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 32 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 33 H 0.07 0.25 8.14 -51.93 -0.42 -0.17 16 34 H 0.07 0.35 6.50 -51.93 -0.34 0.01 16 35 H 0.08 0.22 5.46 -51.93 -0.28 -0.06 16 36 H 0.39 -1.40 7.83 -40.82 -0.32 -1.72 16 37 H 0.10 -0.58 8.10 -51.93 -0.42 -1.00 16 38 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.11 -0.66 7.79 -51.93 -0.40 -1.07 16 40 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 41 H 0.22 -1.00 8.06 -52.49 -0.42 -1.42 16 42 H 0.22 -0.28 8.06 -52.48 -0.42 -0.70 16 43 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 44 H 0.10 -0.33 7.90 -51.93 -0.41 -0.74 16 45 H 0.42 -1.98 8.19 -40.82 -0.33 -2.32 16 LS Contribution 365.88 15.07 5.51 5.51 Total: 0.00 -12.17 365.88 -10.90 -23.06 By element: Atomic # 1 Polarization: -9.30 SS G_CDS: -6.14 Total: -15.43 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -5.08 Total: -3.18 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.36 Total: -0.54 kcal Atomic # 8 Polarization: -4.07 SS G_CDS: -0.28 Total: -4.36 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -4.55 Total: -5.06 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -12.17 -10.90 -23.06 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12297754.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.725 kcal (2) G-P(sol) polarization free energy of solvation -12.167 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.896 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.063 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds