Wall clock time and date at job start Sun Mar 7 2021 04:38:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.35459 * 125.56338 * 2 1 4 4 C 1.50699 * 126.06687 * 0.02562 * 3 2 1 5 5 O 1.42894 * 109.47188 * 210.01675 * 4 3 2 6 6 Si 1.86298 * 109.46950 * 330.02348 * 4 3 2 7 7 C 1.39837 * 107.86344 * 180.27889 * 3 2 1 8 8 C 1.50701 * 126.45453 * 179.76116 * 7 3 2 9 9 C 1.37877 * 107.08406 * 359.61714 * 7 3 2 10 10 C 1.46680 * 126.22710 * 180.13382 * 9 7 3 11 11 O 1.21686 * 120.00232 * 0.32157 * 10 9 7 12 12 N 1.34778 * 119.99457 * 180.31194 * 10 9 7 13 13 C 1.46502 * 119.99956 * 180.02562 * 12 10 9 14 14 H 1.09003 * 112.84972 * 23.80620 * 13 12 10 15 15 C 1.53779 * 113.61456 * 155.00313 * 13 12 10 16 16 C 1.53779 * 87.08060 * 89.11750 * 15 13 12 17 17 H 1.08999 * 113.61421 * 270.88408 * 16 15 13 18 18 C 1.53004 * 113.61547 * 140.06335 * 16 15 13 19 19 N 1.46497 * 109.47131 * 174.99933 * 18 16 15 20 20 C 1.34432 * 126.82096 * 125.00315 * 19 18 16 21 21 N 1.30831 * 108.07461 * 179.97438 * 20 19 18 22 22 C 1.33233 * 109.83026 * 0.02562 * 21 20 19 23 23 N 1.30706 * 108.94861 * 359.75164 * 22 21 20 24 24 C 1.53783 * 87.08437 * 25.43153 * 16 15 13 25 25 N 1.35532 * 125.56646 * 180.02562 * 2 1 3 26 26 H 1.08999 * 109.47633 * 89.99457 * 1 2 3 27 27 H 1.09007 * 109.47107 * 209.99634 * 1 2 3 28 28 H 1.08998 * 109.47405 * 329.98908 * 1 2 3 29 29 H 1.09006 * 109.46662 * 90.01944 * 4 3 2 30 30 H 0.96709 * 113.99337 * 60.00344 * 5 4 3 31 31 H 1.48506 * 109.99834 * 180.02562 * 6 4 3 32 32 H 1.48502 * 110.00011 * 301.31529 * 6 4 3 33 33 H 1.08992 * 109.47148 * 90.00646 * 8 7 3 34 34 H 1.09002 * 109.46665 * 210.00258 * 8 7 3 35 35 H 1.08998 * 109.47074 * 329.99871 * 8 7 3 36 36 H 0.97002 * 120.00219 * 0.02562 * 12 10 9 37 37 H 1.09004 * 113.61377 * 203.66505 * 15 13 12 38 38 H 1.08997 * 113.61377 * 334.57213 * 15 13 12 39 39 H 1.08998 * 109.47159 * 295.00176 * 18 16 15 40 40 H 1.08993 * 109.46776 * 54.99971 * 18 16 15 41 41 H 1.08001 * 125.96297 * 359.92069 * 20 19 18 42 42 H 1.08010 * 125.52610 * 179.97438 * 22 21 20 43 43 H 1.08995 * 113.61914 * 220.01775 * 24 16 15 44 44 H 1.09006 * 113.61141 * 89.11000 * 24 16 15 45 45 H 0.97003 * 125.67949 * 359.94170 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5321 0.0005 5 8 2.7766 3.3520 -0.6735 6 14 0.1799 2.6421 -0.8764 7 6 3.6269 0.6768 -0.0065 8 6 4.8485 1.5593 -0.0139 9 6 3.6121 -0.7019 -0.0015 10 6 4.7860 -1.5814 -0.0027 11 8 5.9048 -1.1029 -0.0026 12 7 4.6253 -2.9196 -0.0037 13 6 5.7977 -3.7981 -0.0043 14 1 6.6875 -3.3168 0.4016 15 6 5.5248 -5.1899 0.5901 16 6 5.1272 -5.6311 -0.8284 17 1 4.0716 -5.4786 -1.0532 18 6 5.6157 -7.0344 -1.1933 19 7 5.0890 -7.4082 -2.5082 20 6 5.7997 -7.8105 -3.5761 21 7 4.9634 -8.0503 -4.5533 22 6 3.7162 -7.8131 -4.1492 23 7 3.7411 -7.4224 -2.9022 24 6 6.0367 -4.5055 -1.3487 25 7 2.2953 -1.1025 -0.0005 26 1 -0.3634 0.0001 -1.0276 27 1 -0.3634 -0.8901 0.5138 28 1 -0.3634 0.8899 0.5140 29 1 1.7061 2.8767 1.0284 30 1 2.9286 3.1021 -1.5953 31 1 -0.2991 4.0478 -0.8833 32 1 0.3144 2.1452 -2.2694 33 1 5.1484 1.7731 1.0119 34 1 5.6614 1.0500 -0.5314 35 1 4.6191 2.4929 -0.5276 36 1 3.7334 -3.3010 -0.0040 37 1 6.4188 -5.6865 0.9673 38 1 4.6982 -5.2069 1.3004 39 1 6.7052 -7.0438 -1.2222 40 1 5.2660 -7.7466 -0.4460 41 1 6.8736 -7.9164 -3.6200 42 1 2.8282 -7.9287 -4.7531 43 1 5.6234 -3.9701 -2.2034 44 1 7.0706 -4.8151 -1.5014 45 1 1.9834 -2.0210 -0.0001 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_12297754.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:47 Heat of formation + Delta-G solvation = 94.968499 kcal Electronic energy + Delta-G solvation = -28260.164104 eV Core-core repulsion = 24282.858653 eV Total energy + Delta-G solvation = -3977.305450 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -43.00500 -42.72079 -41.12015 -39.37589 -37.94232 -35.52910 -34.16040 -33.68497 -32.86770 -32.17237 -29.34442 -29.27027 -27.43216 -26.78273 -26.39033 -24.54288 -23.00247 -22.78353 -22.37784 -20.86796 -20.56980 -20.12620 -19.43652 -18.30228 -17.65072 -17.22433 -16.86059 -16.69140 -16.62494 -16.05238 -15.97956 -15.94009 -15.40315 -15.27733 -15.08029 -14.88031 -14.68700 -14.35539 -14.06189 -13.96137 -13.81448 -13.73341 -13.52238 -13.31981 -13.30104 -13.15128 -12.80729 -12.57979 -12.35248 -12.18259 -11.85030 -11.79634 -11.47500 -11.24832 -10.98511 -10.79939 -10.56111 -10.53277 -10.25124 -9.58276 -9.00915 -4.79021 0.30480 0.68350 1.20337 1.43390 1.64333 1.68031 1.88244 1.99835 2.03681 2.09351 2.19791 3.34206 3.39459 3.43496 3.44290 3.52698 3.71801 3.79093 3.81019 3.91037 3.94618 4.14138 4.16439 4.17817 4.46683 4.48741 4.49748 4.62517 4.64170 4.64822 4.70978 4.75180 4.77375 4.80692 4.85984 4.91863 4.97297 5.06770 5.10771 5.22093 5.29740 5.29792 5.44734 5.47780 5.66944 5.79701 5.92659 6.31390 6.46397 6.55571 7.02666 7.12006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C 0.086 3.914 3 C -0.233 4.233 4 C -0.051 4.051 5 O -0.548 6.548 6 Si 0.759 3.241 7 C -0.069 4.069 8 C -0.093 4.093 9 C -0.085 4.085 10 C 0.590 3.410 11 O -0.565 6.565 12 N -0.703 5.703 13 C 0.111 3.889 14 H 0.091 0.909 15 C -0.116 4.116 16 C -0.113 4.113 17 H 0.087 0.913 18 C 0.131 3.869 19 N -0.376 5.376 20 C 0.255 3.745 21 N -0.586 5.586 22 C 0.185 3.815 23 N -0.346 5.346 24 C -0.145 4.145 25 N -0.518 5.518 26 H 0.101 0.899 27 H 0.117 0.883 28 H 0.119 0.881 29 H 0.115 0.885 30 H 0.381 0.619 31 H -0.303 1.303 32 H -0.293 1.293 33 H 0.055 0.945 34 H 0.055 0.945 35 H 0.084 0.916 36 H 0.407 0.593 37 H 0.125 0.875 38 H 0.087 0.913 39 H 0.137 0.863 40 H 0.102 0.898 41 H 0.255 0.745 42 H 0.231 0.769 43 H 0.044 0.956 44 H 0.110 0.890 45 H 0.432 0.568 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.286 -6.257 3.986 8.568 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.034 4.034 3 C -0.239 4.239 4 C -0.159 4.159 5 O -0.356 6.356 6 Si 0.664 3.336 7 C -0.077 4.077 8 C -0.150 4.150 9 C -0.197 4.197 10 C 0.379 3.621 11 O -0.444 6.444 12 N -0.353 5.353 13 C 0.006 3.994 14 H 0.109 0.891 15 C -0.155 4.155 16 C -0.132 4.132 17 H 0.106 0.894 18 C 0.011 3.989 19 N -0.166 5.166 20 C -0.042 4.042 21 N -0.314 5.314 22 C -0.117 4.117 23 N -0.175 5.175 24 C -0.183 4.183 25 N -0.117 5.117 26 H 0.119 0.881 27 H 0.135 0.865 28 H 0.137 0.863 29 H 0.133 0.867 30 H 0.230 0.770 31 H -0.232 1.232 32 H -0.220 1.220 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.103 0.897 36 H 0.243 0.757 37 H 0.143 0.857 38 H 0.105 0.895 39 H 0.155 0.845 40 H 0.120 0.880 41 H 0.271 0.729 42 H 0.247 0.753 43 H 0.063 0.937 44 H 0.129 0.871 45 H 0.273 0.727 Dipole moment (debyes) X Y Z Total from point charges -4.399 -5.430 4.097 8.101 hybrid contribution 0.989 -0.137 -0.931 1.365 sum -3.410 -5.567 3.166 7.256 Atomic orbital electron populations 1.20715 0.84464 1.05767 1.05657 1.20716 0.95093 0.84824 1.02719 1.19666 0.92494 0.95799 1.15912 1.24632 1.01957 0.86493 1.02854 1.86514 1.61887 1.57683 1.29466 0.94466 0.79183 0.79940 0.79975 1.19941 0.95438 0.91388 1.00976 1.20420 0.93996 0.98834 1.01732 1.19932 0.83804 0.93751 1.22202 1.17192 0.87241 0.82075 0.75550 1.90812 1.25786 1.75767 1.52072 1.45427 1.10143 1.04664 1.75102 1.21915 0.89001 0.90685 0.97817 0.89064 1.23307 1.04322 0.92669 0.95170 1.22806 1.00150 0.92752 0.97508 0.89435 1.22257 1.00935 0.96383 0.79325 1.50744 1.03891 1.48820 1.13194 1.26839 1.01552 0.93627 0.82137 1.70542 1.01509 1.27244 1.32154 1.26442 0.97041 0.97000 0.91251 1.77904 0.97400 1.26418 1.15740 1.23556 1.01362 0.96809 0.96609 1.41702 1.04056 1.09256 1.56669 0.88107 0.86459 0.86335 0.86723 0.77043 1.23193 1.22036 0.92654 0.92568 0.89712 0.75717 0.85725 0.89470 0.84486 0.87989 0.72910 0.75251 0.93675 0.87136 0.72719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.38 8.21 71.23 0.59 1.97 16 2 C 0.09 -0.32 6.84 41.34 0.28 -0.03 16 3 C -0.23 -0.59 5.38 -20.12 -0.11 -0.70 16 4 C -0.05 -0.08 3.03 71.24 0.22 0.13 16 5 O -0.55 -3.09 10.19 -148.98 -1.52 -4.61 16 6 Si 0.76 -1.44 26.76 68.60 1.84 0.40 16 7 C -0.07 -0.53 6.15 -19.56 -0.12 -0.65 16 8 C -0.09 -0.94 9.51 71.24 0.68 -0.26 16 9 C -0.09 -0.40 7.06 40.35 0.28 -0.12 16 10 C 0.59 3.94 7.79 86.45 0.67 4.62 16 11 O -0.57 -8.41 14.41 -4.31 -0.06 -8.47 16 12 N -0.70 1.06 5.26 -443.99 -2.33 -1.28 16 13 C 0.11 -0.35 4.32 45.52 0.20 -0.16 16 14 H 0.09 0.10 7.46 -2.39 -0.02 0.09 16 15 C -0.12 1.18 7.39 31.12 0.23 1.41 16 16 C -0.11 0.90 3.75 -10.27 -0.04 0.86 16 17 H 0.09 -0.37 8.01 -2.39 -0.02 -0.39 16 18 C 0.13 -1.25 6.39 86.38 0.55 -0.69 16 19 N -0.38 0.67 3.69 -352.07 -1.30 -0.63 16 20 C 0.25 -0.41 12.63 180.36 2.28 1.87 16 21 N -0.59 -3.12 11.19 -204.00 -2.28 -5.41 16 22 C 0.19 0.75 13.03 180.77 2.36 3.11 16 23 N -0.35 -1.38 12.46 -61.25 -0.76 -2.14 16 24 C -0.14 0.65 7.43 31.12 0.23 0.89 16 25 N -0.52 1.94 5.99 -171.93 -1.03 0.91 16 26 H 0.10 -1.38 7.13 -2.39 -0.02 -1.39 16 27 H 0.12 -2.03 8.14 -2.38 -0.02 -2.05 16 28 H 0.12 -1.80 5.17 -2.39 -0.01 -1.81 16 29 H 0.12 0.05 7.96 -2.38 -0.02 0.03 16 30 H 0.38 0.54 8.47 -74.05 -0.63 -0.08 16 31 H -0.30 -1.88 7.11 99.48 0.71 -1.18 16 32 H -0.29 -1.01 7.11 99.48 0.71 -0.31 16 33 H 0.05 0.62 8.14 -2.39 -0.02 0.60 16 34 H 0.06 0.76 6.50 -2.39 -0.02 0.74 16 35 H 0.08 0.72 5.46 -2.39 -0.01 0.71 16 36 H 0.41 -2.93 7.83 -92.71 -0.73 -3.65 16 37 H 0.12 -1.73 8.10 -2.39 -0.02 -1.75 16 38 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 39 H 0.14 -2.17 7.79 -2.39 -0.02 -2.19 16 40 H 0.10 -1.09 8.14 -2.39 -0.02 -1.11 16 41 H 0.26 -2.87 8.06 -2.91 -0.02 -2.89 16 42 H 0.23 -0.38 8.06 -2.91 -0.02 -0.41 16 43 H 0.04 0.07 8.14 -2.39 -0.02 0.05 16 44 H 0.11 -0.85 7.90 -2.38 -0.02 -0.86 16 45 H 0.43 -4.74 8.19 -92.71 -0.76 -5.50 16 Total: 0.00 -33.14 365.88 -0.17 -33.31 By element: Atomic # 1 Polarization: -23.30 SS G_CDS: -1.01 Total: -24.32 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: 8.29 Total: 12.24 kcal Atomic # 7 Polarization: -0.84 SS G_CDS: -7.71 Total: -8.55 kcal Atomic # 8 Polarization: -11.50 SS G_CDS: -1.58 Total: -13.08 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: 1.84 Total: 0.40 kcal Total: -33.14 -0.17 -33.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12297754.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.277 kcal (2) G-P(sol) polarization free energy of solvation -33.135 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 95.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.308 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds