Wall clock time and date at job start Sun Mar 7 2021 04:38:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35653 * 117.00606 * 2 1 4 4 C 1.38414 * 120.11374 * 0.02605 * 3 2 1 5 5 C 1.38725 * 120.02702 * 179.97438 * 4 3 2 6 6 O 1.35712 * 119.86052 * 179.97438 * 5 4 3 7 7 C 1.42902 * 117.00149 * 0.02562 * 6 5 4 8 8 C 1.39143 * 120.27862 * 0.02562 * 5 4 3 9 9 C 1.50693 * 119.88368 * 179.97438 * 8 5 4 10 10 O 1.42906 * 109.46944 * 74.99623 * 9 8 5 11 11 Si 1.86295 * 109.47543 * 194.99797 * 9 8 5 12 12 C 1.37589 * 120.23632 * 359.73628 * 8 5 4 13 13 C 1.39816 * 119.96257 * 0.49749 * 12 8 5 14 14 C 1.47301 * 120.13071 * 179.78345 * 13 12 8 15 15 O 1.21625 * 119.99737 * 179.71808 * 14 13 12 16 16 N 1.34772 * 120.00372 * 359.72321 * 14 13 12 17 17 C 1.46506 * 120.00033 * 180.02562 * 16 14 13 18 18 H 1.08992 * 112.90684 * 336.24748 * 17 16 14 19 19 C 1.54049 * 113.61276 * 107.61836 * 17 16 14 20 20 C 1.53781 * 87.08031 * 89.07129 * 19 17 16 21 21 H 1.08999 * 113.61181 * 270.87794 * 20 19 17 22 22 C 1.52995 * 113.69221 * 139.98770 * 20 19 17 23 23 N 1.46505 * 109.47283 * 87.46423 * 22 20 19 24 24 C 1.34429 * 126.82230 * 124.99997 * 23 22 20 25 25 N 1.30827 * 108.07465 * 179.97438 * 24 23 22 26 26 C 1.33246 * 109.83258 * 0.02562 * 25 24 23 27 27 N 1.30716 * 108.94405 * 359.75265 * 26 25 24 28 28 C 1.53781 * 87.08070 * 25.42738 * 20 19 17 29 29 H 1.09000 * 109.46797 * 299.99310 * 1 2 3 30 30 H 1.08993 * 109.47161 * 59.99450 * 1 2 3 31 31 H 1.08998 * 109.47242 * 179.97438 * 1 2 3 32 32 H 1.08000 * 119.98180 * 359.97438 * 4 3 2 33 33 H 1.09007 * 109.46938 * 59.99744 * 7 6 5 34 34 H 1.09000 * 109.47720 * 179.97438 * 7 6 5 35 35 H 1.09002 * 109.47280 * 300.00095 * 7 6 5 36 36 H 1.09000 * 109.47004 * 315.00442 * 9 8 5 37 37 H 0.96709 * 113.99895 * 179.97438 * 10 9 8 38 38 H 1.48502 * 110.00238 * 300.00420 * 11 9 8 39 39 H 1.48502 * 109.99749 * 61.31944 * 11 9 8 40 40 H 1.07995 * 120.01616 * 180.27453 * 12 8 5 41 41 H 0.97002 * 120.00078 * 359.97438 * 16 14 13 42 42 H 1.09005 * 113.62125 * 334.52173 * 19 17 16 43 43 H 1.08996 * 113.68970 * 203.62749 * 19 17 16 44 44 H 1.09000 * 109.47188 * 207.46798 * 22 20 19 45 45 H 1.09001 * 109.47254 * 327.46560 * 22 20 19 46 46 H 1.08002 * 125.95961 * 359.92867 * 24 23 22 47 47 H 1.07996 * 125.52696 * 180.02562 * 26 25 24 48 48 H 1.09002 * 113.61445 * 89.11830 * 28 20 19 49 49 H 1.09002 * 113.61408 * 219.93560 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2086 0.0000 4 6 1.2935 2.3710 0.0005 5 6 1.9253 3.6060 0.0011 6 8 1.1853 4.7436 0.0011 7 6 -0.2358 4.5931 0.0011 8 6 3.3146 3.6834 0.0005 9 6 3.9917 5.0297 0.0005 10 8 3.8946 5.6116 1.3021 11 14 5.7862 4.8224 -0.4547 12 6 4.0725 2.5350 0.0049 13 6 3.4461 1.2850 -0.0005 14 6 4.2539 0.0532 -0.0007 15 8 3.7065 -1.0329 -0.0003 16 7 5.5994 0.1297 -0.0012 17 6 6.4028 -1.0955 -0.0019 18 1 5.8671 -1.9543 0.4024 19 6 7.0979 -1.3768 -1.3475 20 6 8.2767 -0.5394 -0.8240 21 1 8.1903 0.5238 -1.0479 22 6 9.6476 -1.1136 -1.1867 23 7 10.0561 -0.6097 -2.5003 24 6 11.1974 0.0361 -2.7963 25 7 11.1849 0.3177 -4.0738 26 6 10.0570 -0.1299 -4.6244 27 7 9.3353 -0.7098 -3.7016 28 6 7.8087 -0.9105 0.5931 29 1 -0.3633 0.5137 0.8901 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0276 -0.0005 32 1 0.2149 2.3164 0.0006 33 1 -0.5430 4.0438 0.8911 34 1 -0.7054 5.5768 0.0016 35 1 -0.5430 4.0439 -0.8889 36 1 3.5054 5.6809 -0.7257 37 1 4.3104 6.4816 1.3760 38 1 6.4605 3.9365 0.5279 39 1 5.9008 4.2475 -1.8192 40 1 5.1505 2.5992 0.0090 41 1 6.0360 0.9959 -0.0018 42 1 6.5908 -0.9302 -2.2028 43 1 7.3434 -2.4274 -1.5024 44 1 10.3787 -0.8095 -0.4375 45 1 9.5895 -2.2016 -1.2170 46 1 11.9865 0.2806 -2.1006 47 1 9.7854 -0.0335 -5.6652 48 1 8.2482 -1.8340 0.9703 49 1 7.8769 -0.0878 1.3049 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:52 Heat of formation + Delta-G solvation = 26.089762 kcal Electronic energy + Delta-G solvation = -34722.240782 eV Core-core repulsion = 30041.783912 eV Total energy + Delta-G solvation = -4680.456870 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.96546 -42.09885 -41.08416 -40.11491 -39.19311 -38.32760 -37.03359 -35.39209 -33.88761 -32.35853 -32.10277 -31.67042 -29.18323 -29.08931 -28.21367 -26.83351 -26.07572 -25.17289 -24.22113 -22.89665 -22.86428 -22.35062 -21.55068 -20.40662 -19.97258 -18.74909 -18.42204 -18.31832 -18.04093 -17.32196 -17.09611 -16.85524 -16.83659 -16.58426 -16.39375 -16.10598 -15.84158 -15.77767 -15.68595 -15.32713 -15.25011 -15.09314 -14.74607 -14.36047 -14.20146 -14.11890 -13.94368 -13.77088 -13.57491 -13.47236 -13.12717 -12.90002 -12.87182 -12.64314 -12.55994 -12.32187 -12.20577 -11.96880 -11.76361 -11.67380 -11.38670 -10.90045 -10.76392 -10.70339 -10.58683 -10.28854 -10.03391 -9.92858 -9.15990 -5.08362 -0.23348 0.08686 0.71193 1.19138 1.33899 1.52171 1.81518 1.82823 2.01863 2.07390 2.08173 2.12616 2.64302 3.13492 3.28923 3.32317 3.41564 3.45050 3.49156 3.63552 3.66710 3.73357 3.88444 3.89790 3.94634 3.97803 4.00398 4.04016 4.04771 4.12418 4.12755 4.18907 4.25010 4.40304 4.40845 4.42036 4.51639 4.54901 4.60155 4.73306 4.75188 4.85579 4.91334 5.01595 5.05746 5.07011 5.25747 5.32228 5.51839 5.57783 5.84374 5.97771 6.26081 6.50219 6.65970 7.17339 7.32822 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.236 3.764 4 C -0.313 4.313 5 C 0.225 3.775 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.152 4.152 9 C -0.053 4.053 10 O -0.543 6.543 11 Si 0.675 3.325 12 C -0.013 4.013 13 C -0.210 4.210 14 C 0.570 3.430 15 O -0.513 6.513 16 N -0.717 5.717 17 C 0.122 3.878 18 H 0.110 0.890 19 C -0.134 4.134 20 C -0.124 4.124 21 H 0.092 0.908 22 C 0.138 3.862 23 N -0.378 5.378 24 C 0.251 3.749 25 N -0.547 5.547 26 C 0.195 3.805 27 N -0.311 5.311 28 C -0.137 4.137 29 H 0.058 0.942 30 H 0.058 0.942 31 H 0.108 0.892 32 H 0.147 0.853 33 H 0.060 0.940 34 H 0.108 0.892 35 H 0.059 0.941 36 H 0.075 0.925 37 H 0.380 0.620 38 H -0.249 1.249 39 H -0.251 1.251 40 H 0.133 0.867 41 H 0.394 0.606 42 H 0.076 0.924 43 H 0.094 0.906 44 H 0.105 0.895 45 H 0.093 0.907 46 H 0.218 0.782 47 H 0.216 0.784 48 H 0.103 0.897 49 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.050 4.842 2.612 5.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.186 3.814 4 C -0.332 4.332 5 C 0.177 3.823 6 O -0.206 6.206 7 C -0.074 4.074 8 C -0.153 4.153 9 C -0.164 4.164 10 O -0.349 6.349 11 Si 0.576 3.424 12 C -0.031 4.031 13 C -0.214 4.214 14 C 0.358 3.642 15 O -0.389 6.389 16 N -0.370 5.370 17 C 0.016 3.984 18 H 0.127 0.873 19 C -0.173 4.173 20 C -0.143 4.143 21 H 0.110 0.890 22 C 0.016 3.984 23 N -0.170 5.170 24 C -0.046 4.046 25 N -0.274 5.274 26 C -0.108 4.108 27 N -0.139 5.139 28 C -0.176 4.176 29 H 0.077 0.923 30 H 0.077 0.923 31 H 0.126 0.874 32 H 0.165 0.835 33 H 0.078 0.922 34 H 0.126 0.874 35 H 0.078 0.922 36 H 0.093 0.907 37 H 0.227 0.773 38 H -0.174 1.174 39 H -0.175 1.175 40 H 0.150 0.850 41 H 0.229 0.771 42 H 0.094 0.906 43 H 0.113 0.887 44 H 0.123 0.877 45 H 0.112 0.888 46 H 0.234 0.766 47 H 0.232 0.768 48 H 0.121 0.879 49 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -0.392 2.710 2.269 3.556 hybrid contribution -0.688 0.393 0.151 0.807 sum -1.080 3.104 2.420 4.081 Atomic orbital electron populations 1.23256 0.78121 1.04926 1.01387 1.86397 1.21278 1.24922 1.85740 1.18677 0.90478 0.84509 0.87699 1.21302 1.01190 0.91371 1.19370 1.18660 0.90253 0.84806 0.88544 1.86134 1.19502 1.28405 1.86564 1.23230 0.77736 1.04718 1.01696 1.18394 0.90252 0.94217 1.12436 1.24389 1.09919 0.93073 0.89028 1.86522 1.82017 1.37597 1.28755 0.95137 0.77859 0.89404 0.79992 1.20716 0.98660 0.90416 0.93293 1.18983 0.90807 0.93333 1.18260 1.17762 0.81570 0.88607 0.76223 1.90847 1.71236 1.28541 1.48267 1.45562 1.05894 1.08834 1.76687 1.21847 0.90911 0.88483 0.97134 0.87251 1.23467 0.95420 1.00647 0.97781 1.22904 0.93472 1.00715 0.97243 0.88955 1.21920 0.97422 1.00129 0.78932 1.50605 1.14806 1.42985 1.08565 1.26124 0.90849 0.93359 0.94277 1.70559 1.23541 1.26936 1.06340 1.26071 0.88736 0.95289 1.00663 1.78105 1.20084 1.24921 0.90798 1.23367 0.95337 1.03389 0.95523 0.92317 0.92345 0.87378 0.83513 0.92158 0.87389 0.92235 0.90694 0.77258 1.17428 1.17520 0.85017 0.77139 0.90571 0.88740 0.87727 0.88844 0.76581 0.76773 0.87867 0.90280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.27 -1.24 8.56 -40.58 -0.35 -1.59 16 3 C 0.24 0.97 6.70 -38.73 -0.26 0.71 16 4 C -0.31 -0.65 8.01 -39.34 -0.31 -0.96 16 5 C 0.23 0.61 6.67 -39.07 -0.26 0.35 16 6 O -0.30 -0.51 9.80 -18.84 -0.18 -0.70 16 7 C 0.02 -0.04 9.80 101.05 0.99 0.95 16 8 C -0.15 -0.43 5.30 -104.53 -0.55 -0.98 16 9 C -0.05 -0.03 2.36 36.00 0.08 0.06 16 10 O -0.54 -0.35 12.86 -35.23 -0.45 -0.81 16 11 Si 0.67 -0.88 30.20 -169.99 -5.13 -6.01 16 12 C -0.01 -0.03 8.14 -39.23 -0.32 -0.35 16 13 C -0.21 -0.91 5.89 -104.84 -0.62 -1.53 16 14 C 0.57 2.93 7.76 -12.58 -0.10 2.83 16 15 O -0.51 -4.30 14.75 -16.67 -0.25 -4.55 16 16 N -0.72 -1.42 5.21 -53.99 -0.28 -1.70 16 17 C 0.12 0.08 4.34 -66.97 -0.29 -0.21 16 18 H 0.11 0.23 7.46 -51.93 -0.39 -0.16 16 19 C -0.13 -0.05 7.44 -25.78 -0.19 -0.24 16 20 C -0.12 0.21 3.73 -89.81 -0.33 -0.12 16 21 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 22 C 0.14 -0.36 6.39 -4.04 -0.03 -0.39 16 23 N -0.38 -0.20 3.69 -62.63 -0.23 -0.44 16 24 C 0.25 0.05 12.63 -90.66 -1.14 -1.09 16 25 N -0.55 -1.72 11.19 -15.83 -0.18 -1.90 16 26 C 0.20 0.53 13.03 -91.81 -1.20 -0.67 16 27 N -0.31 -0.99 12.57 29.29 0.37 -0.63 16 28 C -0.14 0.35 7.38 -25.92 -0.19 0.16 16 29 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 30 H 0.06 -0.10 7.66 -51.93 -0.40 -0.49 16 31 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 32 H 0.15 -0.09 4.50 -52.49 -0.24 -0.33 16 33 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 34 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 35 H 0.06 -0.18 7.65 -51.93 -0.40 -0.57 16 36 H 0.08 -0.03 7.82 -51.93 -0.41 -0.43 16 37 H 0.38 -1.66 8.74 45.56 0.40 -1.27 16 38 H -0.25 -0.08 6.74 56.52 0.38 0.30 16 39 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 40 H 0.13 0.16 3.20 -52.49 -0.17 -0.01 16 41 H 0.39 0.11 6.72 -40.82 -0.27 -0.16 16 42 H 0.08 0.21 8.14 -51.93 -0.42 -0.21 16 43 H 0.09 -0.01 7.90 -51.93 -0.41 -0.42 16 44 H 0.10 -0.58 8.09 -51.93 -0.42 -1.00 16 45 H 0.09 -0.27 7.85 -51.93 -0.41 -0.68 16 46 H 0.22 -0.92 8.06 -52.49 -0.42 -1.35 16 47 H 0.22 -0.05 8.06 -52.49 -0.42 -0.47 16 48 H 0.10 -0.42 8.10 -51.93 -0.42 -0.84 16 49 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 LS Contribution 405.85 15.07 6.12 6.12 Total: 0.00 -13.45 405.85 -10.80 -24.25 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -6.50 Total: -11.55 kcal Atomic # 6 Polarization: 3.23 SS G_CDS: -3.73 Total: -0.50 kcal Atomic # 7 Polarization: -4.34 SS G_CDS: -0.32 Total: -4.66 kcal Atomic # 8 Polarization: -6.41 SS G_CDS: -1.23 Total: -7.64 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.13 Total: -6.01 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -13.45 -10.80 -24.25 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.337 kcal (2) G-P(sol) polarization free energy of solvation -13.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 36.890 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.247 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.090 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds