Wall clock time and date at job start Sun Mar 7 2021 04:38:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35653 * 117.00606 * 2 1 4 4 C 1.38414 * 120.11374 * 0.02605 * 3 2 1 5 5 C 1.38725 * 120.02702 * 179.97438 * 4 3 2 6 6 O 1.35712 * 119.86052 * 179.97438 * 5 4 3 7 7 C 1.42902 * 117.00149 * 0.02562 * 6 5 4 8 8 C 1.39143 * 120.27862 * 0.02562 * 5 4 3 9 9 C 1.50693 * 119.88368 * 179.97438 * 8 5 4 10 10 O 1.42906 * 109.46944 * 74.99623 * 9 8 5 11 11 Si 1.86295 * 109.47543 * 194.99797 * 9 8 5 12 12 C 1.37589 * 120.23632 * 359.73628 * 8 5 4 13 13 C 1.39816 * 119.96257 * 0.49749 * 12 8 5 14 14 C 1.47301 * 120.13071 * 179.78345 * 13 12 8 15 15 O 1.21625 * 119.99737 * 179.71808 * 14 13 12 16 16 N 1.34772 * 120.00372 * 359.72321 * 14 13 12 17 17 C 1.46506 * 120.00033 * 180.02562 * 16 14 13 18 18 H 1.08992 * 112.90684 * 336.24748 * 17 16 14 19 19 C 1.54049 * 113.61276 * 107.61836 * 17 16 14 20 20 C 1.53781 * 87.08031 * 89.07129 * 19 17 16 21 21 H 1.08999 * 113.61181 * 270.87794 * 20 19 17 22 22 C 1.52995 * 113.69221 * 139.98770 * 20 19 17 23 23 N 1.46505 * 109.47283 * 87.46423 * 22 20 19 24 24 C 1.34429 * 126.82230 * 124.99997 * 23 22 20 25 25 N 1.30827 * 108.07465 * 179.97438 * 24 23 22 26 26 C 1.33246 * 109.83258 * 0.02562 * 25 24 23 27 27 N 1.30716 * 108.94405 * 359.75265 * 26 25 24 28 28 C 1.53781 * 87.08070 * 25.42738 * 20 19 17 29 29 H 1.09000 * 109.46797 * 299.99310 * 1 2 3 30 30 H 1.08993 * 109.47161 * 59.99450 * 1 2 3 31 31 H 1.08998 * 109.47242 * 179.97438 * 1 2 3 32 32 H 1.08000 * 119.98180 * 359.97438 * 4 3 2 33 33 H 1.09007 * 109.46938 * 59.99744 * 7 6 5 34 34 H 1.09000 * 109.47720 * 179.97438 * 7 6 5 35 35 H 1.09002 * 109.47280 * 300.00095 * 7 6 5 36 36 H 1.09000 * 109.47004 * 315.00442 * 9 8 5 37 37 H 0.96709 * 113.99895 * 179.97438 * 10 9 8 38 38 H 1.48502 * 110.00238 * 300.00420 * 11 9 8 39 39 H 1.48502 * 109.99749 * 61.31944 * 11 9 8 40 40 H 1.07995 * 120.01616 * 180.27453 * 12 8 5 41 41 H 0.97002 * 120.00078 * 359.97438 * 16 14 13 42 42 H 1.09005 * 113.62125 * 334.52173 * 19 17 16 43 43 H 1.08996 * 113.68970 * 203.62749 * 19 17 16 44 44 H 1.09000 * 109.47188 * 207.46798 * 22 20 19 45 45 H 1.09001 * 109.47254 * 327.46560 * 22 20 19 46 46 H 1.08002 * 125.95961 * 359.92867 * 24 23 22 47 47 H 1.07996 * 125.52696 * 180.02562 * 26 25 24 48 48 H 1.09002 * 113.61445 * 89.11830 * 28 20 19 49 49 H 1.09002 * 113.61408 * 219.93560 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2086 0.0000 4 6 1.2935 2.3710 0.0005 5 6 1.9253 3.6060 0.0011 6 8 1.1853 4.7436 0.0011 7 6 -0.2358 4.5931 0.0011 8 6 3.3146 3.6834 0.0005 9 6 3.9917 5.0297 0.0005 10 8 3.8946 5.6116 1.3021 11 14 5.7862 4.8224 -0.4547 12 6 4.0725 2.5350 0.0049 13 6 3.4461 1.2850 -0.0005 14 6 4.2539 0.0532 -0.0007 15 8 3.7065 -1.0329 -0.0003 16 7 5.5994 0.1297 -0.0012 17 6 6.4028 -1.0955 -0.0019 18 1 5.8671 -1.9543 0.4024 19 6 7.0979 -1.3768 -1.3475 20 6 8.2767 -0.5394 -0.8240 21 1 8.1903 0.5238 -1.0479 22 6 9.6476 -1.1136 -1.1867 23 7 10.0561 -0.6097 -2.5003 24 6 11.1974 0.0361 -2.7963 25 7 11.1849 0.3177 -4.0738 26 6 10.0570 -0.1299 -4.6244 27 7 9.3353 -0.7098 -3.7016 28 6 7.8087 -0.9105 0.5931 29 1 -0.3633 0.5137 0.8901 30 1 -0.3633 0.5139 -0.8899 31 1 -0.3633 -1.0276 -0.0005 32 1 0.2149 2.3164 0.0006 33 1 -0.5430 4.0438 0.8911 34 1 -0.7054 5.5768 0.0016 35 1 -0.5430 4.0439 -0.8889 36 1 3.5054 5.6809 -0.7257 37 1 4.3104 6.4816 1.3760 38 1 6.4605 3.9365 0.5279 39 1 5.9008 4.2475 -1.8192 40 1 5.1505 2.5992 0.0090 41 1 6.0360 0.9959 -0.0018 42 1 6.5908 -0.9302 -2.2028 43 1 7.3434 -2.4274 -1.5024 44 1 10.3787 -0.8095 -0.4375 45 1 9.5895 -2.2016 -1.2170 46 1 11.9865 0.2806 -2.1006 47 1 9.7854 -0.0335 -5.6652 48 1 8.2482 -1.8340 0.9703 49 1 7.8769 -0.0878 1.3049 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:51 Heat of formation + Delta-G solvation = 23.572758 kcal Electronic energy + Delta-G solvation = -34722.349928 eV Core-core repulsion = 30041.783912 eV Total energy + Delta-G solvation = -4680.566016 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.99713 -42.26563 -41.19498 -40.22201 -39.38428 -38.41634 -37.11370 -35.47601 -34.04414 -32.48339 -32.17600 -31.80914 -29.16365 -29.04793 -28.18716 -26.79101 -26.15189 -25.27720 -24.30764 -22.99997 -22.87110 -22.38506 -21.75124 -20.47396 -20.07618 -18.90235 -18.42026 -18.32667 -18.11919 -17.46490 -17.19299 -16.93374 -16.82783 -16.62114 -16.49964 -16.17911 -15.99648 -15.88720 -15.75880 -15.35359 -15.25596 -15.18222 -14.73097 -14.46175 -14.22716 -14.10752 -13.99125 -13.83423 -13.58257 -13.50365 -13.16386 -12.87142 -12.79757 -12.63223 -12.60594 -12.26363 -12.23836 -12.00633 -11.81235 -11.77549 -11.34099 -11.13598 -10.98876 -10.80713 -10.58748 -10.26861 -10.25763 -10.07204 -9.34448 -5.00227 -0.44789 -0.09410 0.69879 1.24213 1.44064 1.52185 1.61535 1.87076 1.89563 1.98203 1.99981 2.05149 2.40674 3.19681 3.25193 3.33976 3.39261 3.52252 3.53149 3.58165 3.59421 3.71883 3.88882 3.90205 3.92654 4.04272 4.09413 4.12598 4.16571 4.20278 4.20751 4.25571 4.34101 4.41008 4.54084 4.55307 4.60146 4.60940 4.62945 4.69409 4.73278 4.80584 4.89549 4.91299 4.96125 5.06154 5.11876 5.30308 5.44508 5.47581 5.91330 5.94260 6.15059 6.29117 6.93302 7.02622 7.12493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.303 6.303 3 C 0.220 3.780 4 C -0.308 4.308 5 C 0.219 3.781 6 O -0.306 6.306 7 C 0.010 3.990 8 C -0.170 4.170 9 C -0.065 4.065 10 O -0.561 6.561 11 Si 0.762 3.238 12 C -0.014 4.014 13 C -0.234 4.234 14 C 0.565 3.435 15 O -0.557 6.557 16 N -0.707 5.707 17 C 0.107 3.893 18 H 0.091 0.909 19 C -0.136 4.136 20 C -0.113 4.113 21 H 0.082 0.918 22 C 0.133 3.867 23 N -0.379 5.379 24 C 0.257 3.743 25 N -0.584 5.584 26 C 0.183 3.817 27 N -0.346 5.346 28 C -0.114 4.114 29 H 0.073 0.927 30 H 0.073 0.927 31 H 0.116 0.884 32 H 0.172 0.828 33 H 0.067 0.933 34 H 0.126 0.874 35 H 0.071 0.929 36 H 0.083 0.917 37 H 0.401 0.599 38 H -0.269 1.269 39 H -0.290 1.290 40 H 0.142 0.858 41 H 0.402 0.598 42 H 0.044 0.956 43 H 0.098 0.902 44 H 0.146 0.854 45 H 0.099 0.901 46 H 0.261 0.739 47 H 0.228 0.772 48 H 0.127 0.873 49 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.018 6.144 3.909 7.353 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.214 6.214 3 C 0.170 3.830 4 C -0.327 4.327 5 C 0.171 3.829 6 O -0.217 6.217 7 C -0.084 4.084 8 C -0.171 4.171 9 C -0.174 4.174 10 O -0.370 6.370 11 Si 0.666 3.334 12 C -0.033 4.033 13 C -0.238 4.238 14 C 0.354 3.646 15 O -0.436 6.436 16 N -0.359 5.359 17 C 0.002 3.998 18 H 0.109 0.891 19 C -0.175 4.175 20 C -0.132 4.132 21 H 0.100 0.900 22 C 0.012 3.988 23 N -0.170 5.170 24 C -0.039 4.039 25 N -0.312 5.312 26 C -0.120 4.120 27 N -0.174 5.174 28 C -0.153 4.153 29 H 0.092 0.908 30 H 0.092 0.908 31 H 0.134 0.866 32 H 0.189 0.811 33 H 0.086 0.914 34 H 0.144 0.856 35 H 0.089 0.911 36 H 0.101 0.899 37 H 0.252 0.748 38 H -0.195 1.195 39 H -0.217 1.217 40 H 0.159 0.841 41 H 0.238 0.762 42 H 0.063 0.937 43 H 0.116 0.884 44 H 0.164 0.836 45 H 0.117 0.883 46 H 0.276 0.724 47 H 0.245 0.755 48 H 0.145 0.855 49 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.579 4.060 3.596 5.455 hybrid contribution -1.086 0.010 -0.251 1.115 sum -0.507 4.070 3.345 5.293 Atomic orbital electron populations 1.23527 0.76153 1.06016 1.02847 1.86361 1.23548 1.25577 1.85915 1.18908 0.90716 0.85069 0.88269 1.21489 1.02284 0.90495 1.18417 1.18839 0.90590 0.85308 0.88207 1.86123 1.21240 1.28057 1.86255 1.23535 0.75938 1.06279 1.02642 1.18815 0.90879 0.95304 1.12071 1.24614 1.11345 0.92143 0.89294 1.86464 1.82654 1.39257 1.28656 0.94222 0.75125 0.87752 0.76343 1.20806 0.99181 0.90047 0.93217 1.19134 0.91382 0.93511 1.19752 1.18033 0.82467 0.88423 0.75691 1.90804 1.72158 1.29941 1.50698 1.45528 1.05176 1.09812 1.75372 1.22035 0.92238 0.87487 0.98077 0.89131 1.23443 0.96575 1.01104 0.96347 1.22759 0.93384 0.99649 0.97395 0.89972 1.22236 0.97642 1.00467 0.78406 1.50773 1.14731 1.42830 1.08662 1.26931 0.91194 0.91709 0.94068 1.70543 1.24141 1.28406 1.08064 1.26426 0.88839 0.95254 1.01449 1.78034 1.21433 1.25929 0.92052 1.23309 0.92030 1.04900 0.95025 0.90804 0.90818 0.86614 0.81129 0.91389 0.85597 0.91080 0.89940 0.74823 1.19534 1.21662 0.84129 0.76167 0.93736 0.88399 0.83608 0.88276 0.72389 0.75546 0.85460 0.89143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.81 113.37 1.11 1.12 16 2 O -0.30 -3.42 8.56 -68.72 -0.59 -4.00 16 3 C 0.22 2.24 6.70 22.82 0.15 2.39 16 4 C -0.31 -1.48 8.01 22.43 0.18 -1.30 16 5 C 0.22 1.30 6.67 22.60 0.15 1.45 16 6 O -0.31 -0.97 9.80 -90.33 -0.89 -1.86 16 7 C 0.01 -0.05 9.80 113.37 1.11 1.06 16 8 C -0.17 -1.09 5.30 -19.80 -0.10 -1.20 16 9 C -0.06 -0.06 2.36 71.23 0.17 0.11 16 10 O -0.56 -0.42 12.86 -148.98 -1.92 -2.33 16 11 Si 0.76 -2.06 30.20 68.60 2.07 0.02 16 12 C -0.01 -0.10 8.14 22.50 0.18 0.08 16 13 C -0.23 -2.59 5.89 -20.00 -0.12 -2.71 16 14 C 0.56 7.47 7.76 86.63 0.67 8.14 16 15 O -0.56 -11.35 14.75 16.85 0.25 -11.10 16 16 N -0.71 -4.28 5.21 -442.97 -2.31 -6.59 16 17 C 0.11 0.30 4.34 45.61 0.20 0.50 16 18 H 0.09 0.61 7.46 -2.39 -0.02 0.59 16 19 C -0.14 -0.33 7.44 31.21 0.23 -0.10 16 20 C -0.11 0.42 3.73 -10.27 -0.04 0.38 16 21 H 0.08 -0.10 8.14 -2.39 -0.02 -0.11 16 22 C 0.13 -0.92 6.39 86.38 0.55 -0.37 16 23 N -0.38 -0.18 3.69 -352.06 -1.30 -1.48 16 24 C 0.26 -0.20 12.63 180.36 2.28 2.08 16 25 N -0.58 -3.78 11.19 -204.00 -2.28 -6.07 16 26 C 0.18 1.21 13.03 180.76 2.36 3.56 16 27 N -0.35 -2.58 12.57 -61.24 -0.77 -3.35 16 28 C -0.11 0.70 7.38 31.12 0.23 0.93 16 29 H 0.07 -0.22 7.66 -2.39 -0.02 -0.24 16 30 H 0.07 -0.23 7.66 -2.39 -0.02 -0.24 16 31 H 0.12 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.17 -0.26 4.50 -2.91 -0.01 -0.28 16 33 H 0.07 -0.42 7.65 -2.38 -0.02 -0.44 16 34 H 0.13 -1.07 8.14 -2.39 -0.02 -1.09 16 35 H 0.07 -0.50 7.65 -2.39 -0.02 -0.51 16 36 H 0.08 -0.08 7.82 -2.39 -0.02 -0.10 16 37 H 0.40 -3.95 8.74 -74.05 -0.65 -4.59 16 38 H -0.27 -0.10 6.74 99.48 0.67 0.58 16 39 H -0.29 -1.06 7.11 99.48 0.71 -0.35 16 40 H 0.14 0.52 3.20 -2.91 -0.01 0.51 16 41 H 0.40 0.85 6.72 -92.71 -0.62 0.23 16 42 H 0.04 0.40 8.14 -2.38 -0.02 0.38 16 43 H 0.10 0.14 7.90 -2.39 -0.02 0.12 16 44 H 0.15 -2.17 8.09 -2.39 -0.02 -2.19 16 45 H 0.10 -0.74 7.85 -2.39 -0.02 -0.76 16 46 H 0.26 -2.97 8.06 -2.91 -0.02 -2.99 16 47 H 0.23 0.30 8.06 -2.91 -0.02 0.27 16 48 H 0.13 -1.32 8.10 -2.39 -0.02 -1.34 16 49 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 Total: 0.00 -35.47 405.85 1.34 -34.13 By element: Atomic # 1 Polarization: -13.24 SS G_CDS: -0.25 Total: -13.48 kcal Atomic # 6 Polarization: 6.81 SS G_CDS: 9.31 Total: 16.12 kcal Atomic # 7 Polarization: -10.83 SS G_CDS: -6.66 Total: -17.49 kcal Atomic # 8 Polarization: -16.16 SS G_CDS: -3.14 Total: -19.30 kcal Atomic # 14 Polarization: -2.06 SS G_CDS: 2.07 Total: 0.02 kcal Total: -35.47 1.34 -34.13 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 57.707 kcal (2) G-P(sol) polarization free energy of solvation -35.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.235 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.134 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds