Wall clock time and date at job start Sun Mar 7 2021 04:38:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47349 * 2 1 4 4 C 1.50703 * 109.47055 * 240.00160 * 2 1 3 5 5 C 1.38413 * 119.89009 * 119.72877 * 4 2 1 6 6 C 1.38249 * 120.34046 * 179.72412 * 5 4 2 7 7 C 1.38277 * 120.11356 * 0.55043 * 6 5 4 8 8 F 1.35097 * 120.11288 * 179.74668 * 7 6 5 9 9 C 1.39867 * 119.78247 * 359.72683 * 7 6 5 10 10 C 1.47687 * 120.17022 * 180.02562 * 9 7 6 11 11 O 1.21577 * 119.99879 * 359.96929 * 10 9 7 12 12 N 1.34772 * 120.00505 * 179.97438 * 10 9 7 13 13 C 1.46496 * 120.00705 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.84681 * 23.79918 * 13 12 10 15 15 C 1.53776 * 113.61830 * 154.99463 * 13 12 10 16 16 C 1.53781 * 87.08265 * 89.11937 * 15 13 12 17 17 H 1.09000 * 113.61288 * 270.80434 * 16 15 13 18 18 C 1.53000 * 113.61881 * 139.98134 * 16 15 13 19 19 N 1.46497 * 109.47148 * 175.00141 * 18 16 15 20 20 C 1.34432 * 126.82419 * 124.71099 * 19 18 16 21 21 N 1.30828 * 108.07861 * 179.89200 * 20 19 18 22 22 C 1.33240 * 109.83024 * 0.38148 * 21 20 19 23 23 N 1.30713 * 108.94511 * 359.76145 * 22 21 20 24 24 C 1.53779 * 87.07895 * 25.43348 * 16 15 13 25 25 C 1.37901 * 119.89234 * 300.00421 * 4 2 1 26 26 H 0.96703 * 114.00193 * 300.00032 * 1 2 3 27 27 H 1.09002 * 109.46984 * 120.00249 * 2 1 3 28 28 H 1.48501 * 109.99997 * 178.67824 * 3 2 1 29 29 H 1.48495 * 110.00011 * 300.00099 * 3 2 1 30 30 H 1.08005 * 119.83126 * 359.97438 * 5 4 2 31 31 H 1.07996 * 119.94841 * 180.24851 * 6 5 4 32 32 H 0.97008 * 119.99663 * 359.97438 * 12 10 9 33 33 H 1.09004 * 113.61771 * 203.66582 * 15 13 12 34 34 H 1.09006 * 113.61706 * 334.48616 * 15 13 12 35 35 H 1.08996 * 109.47150 * 295.00071 * 18 16 15 36 36 H 1.09000 * 109.46946 * 55.00131 * 18 16 15 37 37 H 1.07998 * 125.95679 * 0.03949 * 20 19 18 38 38 H 1.08005 * 125.52959 * 179.79840 * 22 21 20 39 39 H 1.09003 * 113.61289 * 220.02506 * 24 16 15 40 40 H 1.08999 * 113.61753 * 89.12356 * 24 16 15 41 41 H 1.08002 * 120.05663 * 359.97274 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7223 -0.0339 -2.1429 6 6 3.1928 -0.6781 -3.2720 7 6 2.8659 -2.0017 -3.5025 8 9 3.3215 -2.6298 -4.6084 9 6 2.0622 -2.6885 -2.5867 10 6 1.7082 -4.1025 -2.8241 11 8 2.1152 -4.6724 -3.8179 12 7 0.9340 -4.7612 -1.9391 13 6 0.5824 -6.1637 -2.1749 14 1 1.2942 -6.6753 -2.8228 15 6 0.2509 -6.9401 -0.8896 16 6 -1.2055 -6.4868 -1.0850 17 1 -1.4331 -5.5323 -0.6105 18 6 -2.2341 -7.5719 -0.7604 19 7 -3.5838 -7.0112 -0.8611 20 6 -4.5939 -7.4735 -1.6181 21 7 -5.6314 -6.6996 -1.4273 22 6 -5.3211 -5.7320 -0.5655 23 7 -4.0777 -5.8804 -0.1904 24 6 -0.8853 -6.3704 -2.5846 25 6 1.5967 -2.0306 -1.4466 26 1 -0.3934 0.4417 0.7651 27 1 1.7923 -0.5139 0.8900 28 1 3.5346 1.7702 0.0322 29 1 1.5616 2.4679 -1.2084 30 1 2.9765 1.0015 -1.9699 31 1 3.8128 -0.1453 -3.9777 32 1 0.6096 -4.3066 -1.1460 33 1 0.3890 -8.0174 -0.9823 34 1 0.7217 -6.5283 0.0031 35 1 -2.1291 -8.3951 -1.4670 36 1 -2.0677 -7.9389 0.2524 37 1 -4.5563 -8.3349 -2.2684 38 1 -5.9887 -4.9518 -0.2306 39 1 -1.3328 -5.4976 -3.0602 40 1 -1.0579 -7.2917 -3.1408 41 1 0.9760 -2.5548 -0.7350 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:38:56 Heat of formation + Delta-G solvation = 47.842924 kcal Electronic energy + Delta-G solvation = -27900.538104 eV Core-core repulsion = 23700.010168 eV Total energy + Delta-G solvation = -4200.527936 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -49.89408 -42.98755 -41.64033 -40.55315 -39.30136 -37.62773 -35.52145 -34.18399 -32.70355 -32.36553 -32.11399 -29.20007 -26.97026 -26.73159 -25.85532 -24.59818 -23.23832 -22.93551 -22.38382 -21.67095 -20.37647 -19.20779 -18.71167 -18.48345 -18.21958 -17.78688 -17.17735 -16.81392 -16.76502 -16.48559 -16.07622 -16.00560 -15.82618 -15.64078 -15.53851 -15.13583 -15.00902 -14.71451 -14.45579 -14.18496 -14.03933 -13.93797 -13.71768 -13.45821 -13.30966 -12.90048 -12.65210 -12.57233 -12.32461 -12.10383 -11.87409 -11.61527 -11.07132 -10.90932 -10.71583 -10.57513 -10.55749 -10.46995 -10.17484 -9.85227 -5.13223 -0.57642 -0.14341 0.69044 1.08556 1.31383 1.47413 1.59272 1.78891 1.86089 2.06978 2.40460 2.96202 3.07373 3.15692 3.24095 3.26736 3.31216 3.41622 3.42934 3.55559 3.60102 3.76401 3.83714 3.94285 3.97727 4.02238 4.12439 4.23318 4.35243 4.39347 4.45675 4.46531 4.59144 4.61550 4.72666 4.78302 4.80357 4.83363 4.96136 5.00751 5.29260 5.39576 5.47775 5.49754 5.82835 6.28629 6.42434 7.05482 7.15610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.684 3.316 4 C -0.094 4.094 5 C -0.066 4.066 6 C -0.155 4.155 7 C 0.168 3.832 8 F -0.109 7.109 9 C -0.174 4.174 10 C 0.564 3.436 11 O -0.517 6.517 12 N -0.708 5.708 13 C 0.123 3.877 14 H 0.110 0.890 15 C -0.136 4.136 16 C -0.125 4.125 17 H 0.105 0.895 18 C 0.138 3.862 19 N -0.377 5.377 20 C 0.253 3.747 21 N -0.547 5.547 22 C 0.199 3.801 23 N -0.319 5.319 24 C -0.148 4.148 25 C -0.026 4.026 26 H 0.386 0.614 27 H 0.080 0.920 28 H -0.252 1.252 29 H -0.248 1.248 30 H 0.134 0.866 31 H 0.150 0.850 32 H 0.401 0.599 33 H 0.103 0.897 34 H 0.081 0.919 35 H 0.104 0.896 36 H 0.092 0.908 37 H 0.218 0.782 38 H 0.217 0.783 39 H 0.073 0.927 40 H 0.095 0.905 41 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.678 0.948 6.713 6.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.182 4.182 3 Si 0.585 3.415 4 C -0.095 4.095 5 C -0.084 4.084 6 C -0.174 4.174 7 C 0.147 3.853 8 F -0.087 7.087 9 C -0.178 4.178 10 C 0.351 3.649 11 O -0.393 6.393 12 N -0.360 5.360 13 C 0.017 3.983 14 H 0.128 0.872 15 C -0.174 4.174 16 C -0.144 4.144 17 H 0.123 0.877 18 C 0.016 3.984 19 N -0.168 5.168 20 C -0.043 4.043 21 N -0.274 5.274 22 C -0.104 4.104 23 N -0.146 5.146 24 C -0.186 4.186 25 C -0.045 4.045 26 H 0.234 0.766 27 H 0.098 0.902 28 H -0.177 1.177 29 H -0.172 1.172 30 H 0.151 0.849 31 H 0.168 0.832 32 H 0.237 0.763 33 H 0.121 0.879 34 H 0.099 0.901 35 H 0.123 0.877 36 H 0.111 0.889 37 H 0.234 0.766 38 H 0.233 0.767 39 H 0.092 0.908 40 H 0.114 0.886 41 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.693 1.166 5.320 5.703 hybrid contribution -0.013 -0.563 -0.053 0.565 sum 1.681 0.603 5.266 5.561 Atomic orbital electron populations 1.86482 1.16838 1.81889 1.49979 1.24644 0.86061 1.10604 0.96894 0.95005 0.80815 0.77838 0.87888 1.19318 0.99507 0.94165 0.96484 1.20961 0.95604 0.99186 0.92652 1.21112 1.03472 0.93076 0.99692 1.17688 0.93754 0.90443 0.83425 1.91631 1.85987 1.82006 1.49109 1.20040 1.04650 0.95225 0.97916 1.17922 0.78343 0.85549 0.83086 1.90874 1.52897 1.68232 1.27267 1.45516 1.52362 1.12285 1.25870 1.21787 0.96876 0.81521 0.98078 0.87218 1.23351 0.94417 1.01525 0.98148 1.22990 0.93828 0.99746 0.97806 0.87652 1.21915 0.76603 0.95699 1.04147 1.50560 1.11963 1.21441 1.32850 1.26106 0.83522 0.99474 0.95243 1.70564 1.28709 1.07390 1.20747 1.26047 0.92045 0.98054 0.94265 1.78008 1.13022 1.03307 1.20307 1.23549 0.96228 1.03311 0.95544 1.20996 0.95234 0.93647 0.94648 0.76587 0.90219 1.17673 1.17225 0.84921 0.83199 0.76260 0.87885 0.90055 0.87736 0.88933 0.76614 0.76698 0.90833 0.88628 0.84203 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.00 12.74 -35.23 -0.45 0.55 16 2 C -0.07 0.16 2.81 36.01 0.10 0.26 16 3 Si 0.68 -1.90 29.78 -169.99 -5.06 -6.96 16 4 C -0.09 -0.03 5.42 -104.68 -0.57 -0.60 16 5 C -0.07 -0.04 8.66 -39.51 -0.34 -0.38 16 6 C -0.15 -0.19 10.01 -39.56 -0.40 -0.58 16 7 C 0.17 0.57 7.29 -38.96 -0.28 0.29 16 8 F -0.11 -0.63 15.55 2.25 0.04 -0.59 16 9 C -0.17 -0.44 5.88 -104.92 -0.62 -1.05 16 10 C 0.56 1.95 7.77 -12.40 -0.10 1.85 16 11 O -0.52 -3.77 14.94 5.30 0.08 -3.69 16 12 N -0.71 0.04 5.21 -54.01 -0.28 -0.24 16 13 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 14 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 15 C -0.14 0.51 7.39 -25.92 -0.19 0.32 16 16 C -0.12 0.35 3.75 -89.81 -0.34 0.02 16 17 H 0.11 -0.12 8.00 -51.93 -0.42 -0.54 16 18 C 0.14 -0.46 6.39 -4.04 -0.03 -0.49 16 19 N -0.38 0.00 3.69 -62.63 -0.23 -0.23 16 20 C 0.25 0.01 12.63 -90.65 -1.14 -1.13 16 21 N -0.55 -1.62 11.19 -15.83 -0.18 -1.80 16 22 C 0.20 0.43 13.03 -91.81 -1.20 -0.76 16 23 N -0.32 -0.78 12.45 29.29 0.36 -0.41 16 24 C -0.15 0.24 7.43 -25.92 -0.19 0.04 16 25 C -0.03 -0.01 9.09 -39.19 -0.36 -0.36 16 26 H 0.39 -2.54 8.74 45.56 0.40 -2.14 16 27 H 0.08 -0.33 7.96 -51.93 -0.41 -0.74 16 28 H -0.25 0.13 7.11 56.52 0.40 0.53 16 29 H -0.25 -0.12 7.11 56.52 0.40 0.29 16 30 H 0.13 -0.07 4.86 -52.48 -0.25 -0.32 16 31 H 0.15 -0.13 8.06 -52.49 -0.42 -0.55 16 32 H 0.40 -0.90 6.73 -40.82 -0.27 -1.17 16 33 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 34 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.10 -0.62 7.79 -51.93 -0.40 -1.02 16 36 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 37 H 0.22 -0.91 8.06 -52.49 -0.42 -1.34 16 38 H 0.22 -0.19 8.06 -52.48 -0.42 -0.62 16 39 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.10 -0.27 7.90 -51.93 -0.41 -0.68 16 41 H 0.14 -0.29 6.40 -52.49 -0.34 -0.63 16 LS Contribution 354.18 15.07 5.34 5.34 Total: 0.00 -12.17 354.18 -10.97 -23.14 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -4.65 Total: -12.10 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -5.94 Total: -3.00 kcal Atomic # 7 Polarization: -2.36 SS G_CDS: -0.33 Total: -2.68 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -0.37 Total: -3.14 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.04 Total: -0.59 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.06 Total: -6.96 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -12.17 -10.97 -23.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.987 kcal (2) G-P(sol) polarization free energy of solvation -12.170 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.144 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds