Wall clock time and date at job start Sun Mar 7 2021 04:39:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38322 * 119.92179 * 245.00451 * 4 2 1 6 6 C 1.38470 * 120.28285 * 180.02562 * 5 4 2 7 7 Br 1.89095 * 119.93813 * 179.97438 * 6 5 4 8 8 C 1.38026 * 120.12662 * 359.96783 * 6 5 4 9 9 C 1.39592 * 119.83948 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.13772 * 180.02562 * 9 8 6 11 11 O 1.21551 * 119.99923 * 180.02562 * 10 9 8 12 12 N 1.34773 * 120.00095 * 359.97438 * 10 9 8 13 13 C 1.46501 * 120.00198 * 180.02562 * 12 10 9 14 14 H 1.09008 * 112.84387 * 336.19646 * 13 12 10 15 15 C 1.53780 * 113.61727 * 107.49679 * 13 12 10 16 16 C 1.53789 * 87.07571 * 89.12025 * 15 13 12 17 17 H 1.08996 * 113.61428 * 270.88059 * 16 15 13 18 18 C 1.53004 * 113.68792 * 139.99488 * 16 15 13 19 19 N 1.46496 * 109.47263 * 87.46670 * 18 16 15 20 20 C 1.34422 * 126.82618 * 124.99803 * 19 18 16 21 21 N 1.30829 * 108.08046 * 179.97438 * 20 19 18 22 22 C 1.33241 * 109.83056 * 359.97438 * 21 20 19 23 23 N 1.30716 * 108.94620 * 359.75630 * 22 21 20 24 24 C 1.53771 * 113.61710 * 204.99994 * 13 12 10 25 25 C 1.37981 * 119.92104 * 64.72227 * 4 2 1 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.08000 * 119.86090 * 359.96758 * 5 4 2 31 31 H 1.07997 * 120.08332 * 180.02562 * 8 6 5 32 32 H 0.96999 * 119.99843 * 0.02562 * 12 10 9 33 33 H 1.08994 * 113.61531 * 203.66519 * 15 13 12 34 34 H 1.08998 * 113.61751 * 334.57520 * 15 13 12 35 35 H 1.09001 * 109.46694 * 207.46102 * 18 16 15 36 36 H 1.08994 * 109.47339 * 327.46257 * 18 16 15 37 37 H 1.07997 * 125.96383 * 359.97438 * 20 19 18 38 38 H 1.07998 * 125.53071 * 179.97438 * 22 21 20 39 39 H 1.09009 * 113.61442 * 25.43050 * 24 13 12 40 40 H 1.09001 * 113.61600 * 156.24699 * 24 13 12 41 41 H 1.08004 * 120.06576 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6389 -0.0103 2.1909 6 6 3.1044 -0.6557 3.3241 7 35 4.0713 0.3108 4.6305 8 6 2.8639 -2.0031 3.5019 9 6 2.1502 -2.7148 2.5361 10 6 1.8884 -4.1582 2.7202 11 8 1.2671 -4.7755 1.8773 12 7 2.3394 -4.7897 3.8221 13 6 2.0804 -6.2201 4.0042 14 1 1.2101 -6.5669 3.4469 15 6 3.3267 -7.1009 3.8148 16 6 3.5970 -6.9043 5.3159 17 1 4.2044 -6.0272 5.5390 18 6 4.0955 -8.1672 6.0213 19 7 5.5544 -8.2438 5.9123 20 6 6.4327 -8.3629 6.9229 21 7 7.6368 -8.3981 6.4124 22 6 7.5679 -8.3050 5.0851 23 7 6.3130 -8.2140 4.7306 24 6 2.0865 -6.6647 5.4763 25 6 1.6793 -2.0565 1.3991 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 2.8299 1.0441 2.0559 31 1 3.2269 -2.5057 4.3862 32 1 2.8355 -4.2972 4.4945 33 1 3.0961 -8.1312 3.5439 34 1 4.0846 -6.6527 3.1723 35 1 3.8111 -8.1322 7.0729 36 1 3.6497 -9.0448 5.5533 37 1 6.1873 -8.4197 7.9731 38 1 8.4117 -8.3080 4.4110 39 1 1.8432 -5.8643 6.1752 40 1 1.5157 -7.5749 5.6599 41 1 1.1230 -2.6008 0.6503 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12335870.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:30 Heat of formation + Delta-G solvation = 93.709514 kcal Electronic energy + Delta-G solvation = -27071.413155 eV Core-core repulsion = 23002.510117 eV Total energy + Delta-G solvation = -4068.903038 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.047 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.99103 -41.75989 -40.66585 -39.28744 -37.83450 -35.55405 -34.26443 -33.69320 -32.82697 -32.12213 -30.51309 -29.23652 -27.09598 -26.91819 -25.81674 -24.28421 -22.89514 -22.73140 -22.44545 -21.70111 -20.50298 -18.99522 -18.68659 -18.33800 -17.72857 -17.43395 -16.87042 -16.79928 -16.22476 -16.18392 -16.07928 -15.59419 -15.48893 -15.29434 -14.99375 -14.85248 -14.73451 -14.39725 -14.12709 -14.04412 -13.75542 -13.64632 -13.21094 -12.95716 -12.83458 -12.44137 -12.39416 -12.01323 -11.87937 -11.82665 -11.51677 -11.45923 -11.09184 -10.92185 -10.72730 -10.67099 -10.61680 -10.35324 -10.14681 -9.92950 -5.10011 -0.51900 -0.18569 0.38337 0.68606 1.09676 1.31009 1.46035 1.54995 1.81148 1.88934 2.06149 2.44757 3.04535 3.07955 3.23217 3.32533 3.39603 3.42133 3.48280 3.59776 3.71631 3.82981 3.84177 3.93843 3.95096 3.97746 4.06529 4.18906 4.23999 4.38713 4.41027 4.47220 4.53553 4.63750 4.72205 4.79343 4.90412 4.93914 4.98917 5.07616 5.29060 5.34421 5.43688 5.49551 5.81798 6.28211 6.29979 7.04001 7.15205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.076 4.076 3 Si 0.678 3.322 4 C -0.072 4.072 5 C -0.061 4.061 6 C -0.094 4.094 7 Br -0.032 7.032 8 C -0.053 4.053 9 C -0.129 4.129 10 C 0.566 3.434 11 O -0.524 6.524 12 N -0.709 5.709 13 C 0.119 3.881 14 H 0.109 0.891 15 C -0.134 4.134 16 C -0.123 4.123 17 H 0.095 0.905 18 C 0.137 3.863 19 N -0.379 5.379 20 C 0.251 3.749 21 N -0.547 5.547 22 C 0.196 3.804 23 N -0.312 5.312 24 C -0.137 4.137 25 C -0.015 4.015 26 H 0.384 0.616 27 H 0.084 0.916 28 H -0.254 1.254 29 H -0.250 1.250 30 H 0.143 0.857 31 H 0.137 0.863 32 H 0.400 0.600 33 H 0.094 0.906 34 H 0.077 0.923 35 H 0.104 0.896 36 H 0.093 0.907 37 H 0.218 0.782 38 H 0.216 0.784 39 H 0.080 0.920 40 H 0.103 0.897 41 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.175 0.841 2.231 2.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.579 3.421 4 C -0.073 4.073 5 C -0.081 4.081 6 C -0.174 4.174 7 Br 0.054 6.946 8 C -0.074 4.074 9 C -0.133 4.133 10 C 0.353 3.647 11 O -0.400 6.400 12 N -0.360 5.360 13 C 0.013 3.987 14 H 0.127 0.873 15 C -0.173 4.173 16 C -0.142 4.142 17 H 0.113 0.887 18 C 0.015 3.985 19 N -0.170 5.170 20 C -0.046 4.046 21 N -0.274 5.274 22 C -0.107 4.107 23 N -0.139 5.139 24 C -0.175 4.175 25 C -0.034 4.034 26 H 0.233 0.767 27 H 0.102 0.898 28 H -0.179 1.179 29 H -0.175 1.175 30 H 0.160 0.840 31 H 0.155 0.845 32 H 0.236 0.764 33 H 0.113 0.887 34 H 0.096 0.904 35 H 0.123 0.877 36 H 0.111 0.889 37 H 0.234 0.766 38 H 0.232 0.768 39 H 0.099 0.901 40 H 0.121 0.879 41 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -0.063 1.304 2.122 2.491 hybrid contribution -1.099 -0.129 -0.147 1.116 sum -1.162 1.175 1.975 2.575 Atomic orbital electron populations 1.86586 1.17228 1.80264 1.50020 1.24772 0.84979 1.11110 0.97689 0.95097 0.91581 0.74431 0.81020 1.19211 0.98789 0.93683 0.95580 1.21200 0.95340 1.00078 0.91450 1.21591 1.04178 0.95023 0.96561 1.96839 1.72268 1.73672 1.51849 1.21250 0.95584 0.92345 0.98211 1.19902 1.02862 0.93644 0.96865 1.18072 0.78728 0.86273 0.81595 1.90822 1.39800 1.67160 1.42250 1.45551 1.57664 1.09847 1.22964 1.21867 0.99571 0.80081 0.97161 0.87270 1.23417 0.97722 1.00803 0.95316 1.22914 0.96468 0.97488 0.97346 0.88676 1.21914 0.74173 0.99555 1.02817 1.50597 1.08060 1.53797 1.04534 1.26121 0.84875 0.96746 0.96825 1.70564 1.23017 1.24616 1.09178 1.26073 0.94784 0.98176 0.91646 1.78099 1.04602 1.25529 1.05704 1.23360 0.94960 1.02873 0.96353 1.21275 0.93313 0.93181 0.95675 0.76749 0.89765 1.17903 1.17450 0.83994 0.84497 0.76427 0.88712 0.90429 0.87740 0.88900 0.76608 0.76759 0.90140 0.87866 0.83490 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.29 12.80 -35.23 -0.45 -0.74 16 2 C -0.08 0.06 2.79 36.01 0.10 0.16 16 3 Si 0.68 -1.08 29.84 -169.99 -5.07 -6.16 16 4 C -0.07 -0.04 5.38 -104.68 -0.56 -0.60 16 5 C -0.06 0.00 8.41 -39.47 -0.33 -0.33 16 6 C -0.09 0.00 6.22 -39.57 -0.25 -0.24 16 7 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 8 C -0.05 0.03 9.28 -39.15 -0.36 -0.33 16 9 C -0.13 -0.13 5.87 -104.97 -0.62 -0.74 16 10 C 0.57 1.14 7.77 -12.33 -0.10 1.04 16 11 O -0.52 -2.97 15.95 5.32 0.08 -2.88 16 12 N -0.71 0.70 5.21 -53.96 -0.28 0.42 16 13 C 0.12 -0.18 4.32 -67.12 -0.29 -0.47 16 14 H 0.11 0.02 7.46 -51.92 -0.39 -0.37 16 15 C -0.13 0.19 7.43 -25.91 -0.19 -0.01 16 16 C -0.12 0.42 3.73 -89.80 -0.33 0.08 16 17 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 18 C 0.14 -0.51 6.39 -4.04 -0.03 -0.54 16 19 N -0.38 0.15 3.69 -62.64 -0.23 -0.08 16 20 C 0.25 -0.12 12.63 -90.66 -1.14 -1.26 16 21 N -0.55 -1.39 11.19 -15.83 -0.18 -1.57 16 22 C 0.20 0.38 13.03 -91.81 -1.20 -0.81 16 23 N -0.31 -0.69 12.58 29.29 0.37 -0.32 16 24 C -0.14 0.59 7.39 -25.93 -0.19 0.40 16 25 C -0.02 -0.02 9.22 -39.18 -0.36 -0.38 16 26 H 0.38 -1.33 8.74 45.56 0.40 -0.93 16 27 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 28 H -0.25 -0.09 7.11 56.52 0.40 0.32 16 29 H -0.25 -0.32 7.05 56.52 0.40 0.07 16 30 H 0.14 -0.18 4.85 -52.49 -0.25 -0.44 16 31 H 0.14 -0.41 6.41 -52.49 -0.34 -0.75 16 32 H 0.40 -1.29 6.74 -40.82 -0.27 -1.57 16 33 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 34 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.10 -0.68 8.09 -51.93 -0.42 -1.10 16 36 H 0.09 -0.36 7.85 -51.93 -0.41 -0.77 16 37 H 0.22 -1.05 8.06 -52.49 -0.42 -1.47 16 38 H 0.22 -0.20 8.06 -52.49 -0.42 -0.62 16 39 H 0.08 -0.38 8.14 -51.92 -0.42 -0.80 16 40 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 41 H 0.15 0.31 7.65 -52.48 -0.40 -0.09 16 LS Contribution 371.25 15.07 5.59 5.59 Total: 0.00 -10.79 371.25 -12.95 -23.75 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -4.64 Total: -11.69 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -5.85 Total: -4.04 kcal Atomic # 7 Polarization: -1.23 SS G_CDS: -0.32 Total: -1.55 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.37 Total: -3.62 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.07 Total: -6.16 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -10.79 -12.95 -23.75 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12335870.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.458 kcal (2) G-P(sol) polarization free energy of solvation -10.795 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.954 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.748 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds