Wall clock time and date at job start Sun Mar 7 2021 04:39:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38322 * 119.92179 * 245.00451 * 4 2 1 6 6 C 1.38470 * 120.28285 * 180.02562 * 5 4 2 7 7 Br 1.89095 * 119.93813 * 179.97438 * 6 5 4 8 8 C 1.38026 * 120.12662 * 359.96783 * 6 5 4 9 9 C 1.39592 * 119.83948 * 0.02562 * 8 6 5 10 10 C 1.47849 * 120.13772 * 180.02562 * 9 8 6 11 11 O 1.21551 * 119.99923 * 180.02562 * 10 9 8 12 12 N 1.34773 * 120.00095 * 359.97438 * 10 9 8 13 13 C 1.46501 * 120.00198 * 180.02562 * 12 10 9 14 14 H 1.09008 * 112.84387 * 336.19646 * 13 12 10 15 15 C 1.53780 * 113.61727 * 107.49679 * 13 12 10 16 16 C 1.53789 * 87.07571 * 89.12025 * 15 13 12 17 17 H 1.08996 * 113.61428 * 270.88059 * 16 15 13 18 18 C 1.53004 * 113.68792 * 139.99488 * 16 15 13 19 19 N 1.46496 * 109.47263 * 87.46670 * 18 16 15 20 20 C 1.34422 * 126.82618 * 124.99803 * 19 18 16 21 21 N 1.30829 * 108.08046 * 179.97438 * 20 19 18 22 22 C 1.33241 * 109.83056 * 359.97438 * 21 20 19 23 23 N 1.30716 * 108.94620 * 359.75630 * 22 21 20 24 24 C 1.53771 * 113.61710 * 204.99994 * 13 12 10 25 25 C 1.37981 * 119.92104 * 64.72227 * 4 2 1 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.08000 * 119.86090 * 359.96758 * 5 4 2 31 31 H 1.07997 * 120.08332 * 180.02562 * 8 6 5 32 32 H 0.96999 * 119.99843 * 0.02562 * 12 10 9 33 33 H 1.08994 * 113.61531 * 203.66519 * 15 13 12 34 34 H 1.08998 * 113.61751 * 334.57520 * 15 13 12 35 35 H 1.09001 * 109.46694 * 207.46102 * 18 16 15 36 36 H 1.08994 * 109.47339 * 327.46257 * 18 16 15 37 37 H 1.07997 * 125.96383 * 359.97438 * 20 19 18 38 38 H 1.07998 * 125.53071 * 179.97438 * 22 21 20 39 39 H 1.09009 * 113.61442 * 25.43050 * 24 13 12 40 40 H 1.09001 * 113.61600 * 156.24699 * 24 13 12 41 41 H 1.08004 * 120.06576 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6389 -0.0103 2.1909 6 6 3.1044 -0.6557 3.3241 7 35 4.0713 0.3108 4.6305 8 6 2.8639 -2.0031 3.5019 9 6 2.1502 -2.7148 2.5361 10 6 1.8884 -4.1582 2.7202 11 8 1.2671 -4.7755 1.8773 12 7 2.3394 -4.7897 3.8221 13 6 2.0804 -6.2201 4.0042 14 1 1.2101 -6.5669 3.4469 15 6 3.3267 -7.1009 3.8148 16 6 3.5970 -6.9043 5.3159 17 1 4.2044 -6.0272 5.5390 18 6 4.0955 -8.1672 6.0213 19 7 5.5544 -8.2438 5.9123 20 6 6.4327 -8.3629 6.9229 21 7 7.6368 -8.3981 6.4124 22 6 7.5679 -8.3050 5.0851 23 7 6.3130 -8.2140 4.7306 24 6 2.0865 -6.6647 5.4763 25 6 1.6793 -2.0565 1.3991 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 2.8299 1.0441 2.0559 31 1 3.2269 -2.5057 4.3862 32 1 2.8355 -4.2972 4.4945 33 1 3.0961 -8.1312 3.5439 34 1 4.0846 -6.6527 3.1723 35 1 3.8111 -8.1322 7.0729 36 1 3.6497 -9.0448 5.5533 37 1 6.1873 -8.4197 7.9731 38 1 8.4117 -8.3080 4.4110 39 1 1.8432 -5.8643 6.1752 40 1 1.5157 -7.5749 5.6599 41 1 1.1230 -2.6008 0.6503 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_12335870.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:29 Heat of formation + Delta-G solvation = 94.776764 kcal Electronic energy + Delta-G solvation = -27071.366876 eV Core-core repulsion = 23002.510117 eV Total energy + Delta-G solvation = -4068.856759 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.047 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.95188 -41.79584 -40.59963 -39.33485 -37.82963 -35.52840 -34.26602 -33.71341 -32.82101 -32.12565 -30.51986 -29.10160 -27.06738 -26.72649 -25.82255 -24.21777 -22.83108 -22.74747 -22.37969 -21.72484 -20.39913 -19.00497 -18.66360 -18.22186 -17.74954 -17.41966 -16.77263 -16.74416 -16.27438 -16.20447 -16.05392 -15.52815 -15.46477 -15.21258 -15.00777 -14.87385 -14.62714 -14.36011 -14.05962 -14.00440 -13.71768 -13.48343 -13.12401 -12.87816 -12.82599 -12.43471 -12.20854 -12.03947 -11.88723 -11.73980 -11.53605 -11.27065 -11.22989 -10.94358 -10.76097 -10.63394 -10.53671 -10.39703 -10.12929 -9.94412 -4.99656 -0.56601 -0.20246 0.37846 0.74011 1.17772 1.45237 1.49176 1.53893 1.85023 1.90958 2.04276 2.39240 3.11608 3.29335 3.34458 3.44369 3.55438 3.56682 3.64885 3.73140 3.78086 3.82872 3.94060 3.98236 4.11141 4.14589 4.23855 4.24187 4.43961 4.47648 4.60253 4.65401 4.71671 4.76488 4.81771 4.88307 4.97654 5.04073 5.04876 5.11982 5.31681 5.35438 5.48870 5.51540 5.98429 6.29190 6.51135 6.97417 7.17075 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.088 4.088 3 Si 0.758 3.242 4 C -0.078 4.078 5 C -0.063 4.063 6 C -0.099 4.099 7 Br -0.026 7.026 8 C -0.045 4.045 9 C -0.137 4.137 10 C 0.563 3.437 11 O -0.570 6.570 12 N -0.694 5.694 13 C 0.107 3.893 14 H 0.089 0.911 15 C -0.137 4.137 16 C -0.111 4.111 17 H 0.091 0.909 18 C 0.131 3.869 19 N -0.378 5.378 20 C 0.256 3.744 21 N -0.586 5.586 22 C 0.183 3.817 23 N -0.343 5.343 24 C -0.115 4.115 25 C -0.030 4.030 26 H 0.399 0.601 27 H 0.101 0.899 28 H -0.278 1.278 29 H -0.288 1.288 30 H 0.154 0.846 31 H 0.161 0.839 32 H 0.413 0.587 33 H 0.093 0.907 34 H 0.049 0.951 35 H 0.144 0.856 36 H 0.096 0.904 37 H 0.258 0.742 38 H 0.228 0.772 39 H 0.095 0.905 40 H 0.121 0.879 41 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.272 1.005 4.250 4.375 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.196 4.196 3 Si 0.661 3.339 4 C -0.079 4.079 5 C -0.083 4.083 6 C -0.179 4.179 7 Br 0.060 6.940 8 C -0.065 4.065 9 C -0.141 4.141 10 C 0.351 3.649 11 O -0.450 6.450 12 N -0.345 5.345 13 C 0.001 3.999 14 H 0.107 0.893 15 C -0.176 4.176 16 C -0.130 4.130 17 H 0.109 0.891 18 C 0.010 3.990 19 N -0.168 5.168 20 C -0.040 4.040 21 N -0.314 5.314 22 C -0.120 4.120 23 N -0.171 5.171 24 C -0.153 4.153 25 C -0.049 4.049 26 H 0.250 0.750 27 H 0.119 0.881 28 H -0.205 1.205 29 H -0.215 1.215 30 H 0.171 0.829 31 H 0.179 0.821 32 H 0.251 0.749 33 H 0.111 0.889 34 H 0.068 0.932 35 H 0.162 0.838 36 H 0.114 0.886 37 H 0.274 0.726 38 H 0.244 0.756 39 H 0.113 0.887 40 H 0.140 0.860 41 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 0.040 1.455 4.161 4.408 hybrid contribution -1.170 -0.173 -0.768 1.410 sum -1.130 1.282 3.393 3.800 Atomic orbital electron populations 1.86540 1.18046 1.80843 1.51273 1.25034 0.84531 1.12162 0.97877 0.94212 0.90282 0.71890 0.77467 1.19360 0.98877 0.93345 0.96283 1.21373 0.94966 1.00609 0.91321 1.21701 1.04206 0.95278 0.96687 1.96846 1.72097 1.73577 1.51528 1.21429 0.94521 0.92176 0.98358 1.19871 1.03668 0.93218 0.97362 1.18296 0.78252 0.86677 0.81676 1.90793 1.42163 1.68140 1.43950 1.45477 1.56638 1.10176 1.22219 1.21993 0.98746 0.79609 0.99511 0.89322 1.23393 0.96961 1.00443 0.96756 1.22785 0.97155 0.97684 0.95365 0.89103 1.22251 0.72366 0.99177 1.05189 1.50773 1.09096 1.53181 1.03793 1.26888 0.84046 0.94848 0.98240 1.70542 1.25008 1.26282 1.09527 1.26418 0.95284 0.98229 0.92060 1.78027 1.05035 1.26465 1.07607 1.23296 0.94157 1.03914 0.93932 1.21282 0.93913 0.93782 0.95916 0.75018 0.88077 1.20479 1.21542 0.82897 0.82117 0.74938 0.88868 0.93217 0.83847 0.88602 0.72600 0.75585 0.88656 0.86043 0.84892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.09 12.80 -148.98 -1.91 -3.00 16 2 C -0.09 0.09 2.79 71.24 0.20 0.29 16 3 Si 0.76 -2.32 29.84 68.60 2.05 -0.28 16 4 C -0.08 -0.15 5.38 -19.90 -0.11 -0.26 16 5 C -0.06 -0.01 8.41 22.34 0.19 0.18 16 6 C -0.10 0.03 6.22 22.27 0.14 0.17 16 7 Br -0.03 0.03 33.69 -20.37 -0.69 -0.66 16 8 C -0.04 0.06 9.28 22.55 0.21 0.27 16 9 C -0.14 -0.44 5.87 -20.09 -0.12 -0.55 16 10 C 0.56 3.22 7.77 86.79 0.67 3.90 16 11 O -0.57 -8.07 15.95 -3.88 -0.06 -8.13 16 12 N -0.69 0.96 5.21 -442.92 -2.31 -1.35 16 13 C 0.11 -0.25 4.32 45.51 0.20 -0.06 16 14 H 0.09 0.19 7.46 -2.38 -0.02 0.17 16 15 C -0.14 0.25 7.43 31.12 0.23 0.48 16 16 C -0.11 0.87 3.73 -10.27 -0.04 0.83 16 17 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 18 C 0.13 -1.23 6.39 86.38 0.55 -0.67 16 19 N -0.38 0.65 3.69 -352.08 -1.30 -0.65 16 20 C 0.26 -0.59 12.63 180.36 2.28 1.69 16 21 N -0.59 -2.99 11.19 -204.01 -2.28 -5.28 16 22 C 0.18 0.88 13.03 180.76 2.36 3.23 16 23 N -0.34 -1.75 12.58 -61.24 -0.77 -2.52 16 24 C -0.11 1.18 7.39 31.11 0.23 1.41 16 25 C -0.03 -0.14 9.22 22.53 0.21 0.07 16 26 H 0.40 -2.49 8.74 -74.06 -0.65 -3.13 16 27 H 0.10 -0.48 7.96 -2.39 -0.02 -0.50 16 28 H -0.28 -0.24 7.11 99.48 0.71 0.47 16 29 H -0.29 -0.95 7.05 99.48 0.70 -0.24 16 30 H 0.15 -0.41 4.85 -2.91 -0.01 -0.42 16 31 H 0.16 -1.14 6.41 -2.91 -0.02 -1.16 16 32 H 0.41 -2.86 6.74 -92.71 -0.62 -3.49 16 33 H 0.09 -0.16 7.90 -2.39 -0.02 -0.18 16 34 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 35 H 0.14 -2.43 8.09 -2.39 -0.02 -2.45 16 36 H 0.10 -0.90 7.85 -2.39 -0.02 -0.92 16 37 H 0.26 -3.24 8.06 -2.91 -0.02 -3.26 16 38 H 0.23 -0.08 8.06 -2.91 -0.02 -0.10 16 39 H 0.09 -1.17 8.14 -2.38 -0.02 -1.19 16 40 H 0.12 -1.62 8.10 -2.39 -0.02 -1.63 16 41 H 0.13 0.95 7.65 -2.91 -0.02 0.93 16 Total: 0.00 -28.22 371.25 -0.21 -28.43 By element: Atomic # 1 Polarization: -17.41 SS G_CDS: -0.14 Total: -17.54 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: 7.20 Total: 10.97 kcal Atomic # 7 Polarization: -3.14 SS G_CDS: -6.66 Total: -9.80 kcal Atomic # 8 Polarization: -9.16 SS G_CDS: -1.97 Total: -11.13 kcal Atomic # 14 Polarization: -2.32 SS G_CDS: 2.05 Total: -0.28 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -0.69 Total: -0.66 kcal Total: -28.22 -0.21 -28.43 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12335870.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.203 kcal (2) G-P(sol) polarization free energy of solvation -28.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.211 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.426 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds