Wall clock time and date at job start Sun Mar 7 2021 04:39:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47231 * 2 1 4 4 C 1.50701 * 109.46958 * 240.00517 * 2 1 3 5 5 C 1.38407 * 119.82421 * 299.99863 * 4 2 1 6 6 C 1.37893 * 120.16812 * 180.02562 * 5 4 2 7 7 C 1.39828 * 119.82996 * 359.97438 * 6 5 4 8 8 C 1.47203 * 120.17183 * 179.97438 * 7 6 5 9 9 C 1.34813 * 120.00190 * 180.02562 * 8 7 6 10 10 C 1.46432 * 119.99865 * 179.97438 * 9 8 7 11 11 O 1.21689 * 120.00301 * 0.02562 * 10 9 8 12 12 N 1.34782 * 119.99579 * 180.02562 * 10 9 8 13 13 C 1.46501 * 119.99791 * 180.02562 * 12 10 9 14 14 H 1.09000 * 112.90697 * 23.74438 * 13 12 10 15 15 C 1.53773 * 113.61420 * 154.99795 * 13 12 10 16 16 C 1.53780 * 87.08121 * 89.11448 * 15 13 12 17 17 H 1.08997 * 113.61635 * 270.79867 * 16 15 13 18 18 C 1.53001 * 113.61742 * 139.97885 * 16 15 13 19 19 N 1.46499 * 109.47683 * 175.00040 * 18 16 15 20 20 C 1.34430 * 126.82358 * 124.97840 * 19 18 16 21 21 N 1.30832 * 108.07308 * 179.79414 * 20 19 18 22 22 C 1.33234 * 109.83313 * 0.40801 * 21 20 19 23 23 N 1.30720 * 108.94479 * 359.58957 * 22 21 20 24 24 C 1.53774 * 113.61205 * 252.49813 * 13 12 10 25 25 C 1.39844 * 119.65977 * 0.25447 * 7 6 5 26 26 C 1.37892 * 119.82470 * 359.53396 * 25 7 6 27 27 H 0.96700 * 114.00391 * 59.99676 * 1 2 3 28 28 H 1.08996 * 109.47520 * 120.00325 * 2 1 3 29 29 H 1.48500 * 109.99680 * 60.00308 * 3 2 1 30 30 H 1.48498 * 109.99942 * 181.32223 * 3 2 1 31 31 H 1.07999 * 119.91651 * 359.97438 * 5 4 2 32 32 H 1.08003 * 120.08270 * 179.97438 * 6 5 4 33 33 H 1.08005 * 120.00218 * 359.97438 * 8 7 6 34 34 H 1.08001 * 119.99858 * 0.02562 * 9 8 7 35 35 H 0.97003 * 120.00154 * 359.97438 * 12 10 9 36 36 H 1.09008 * 113.61724 * 334.57023 * 15 13 12 37 37 H 1.09000 * 113.69458 * 203.67564 * 15 13 12 38 38 H 1.09009 * 109.47058 * 55.00127 * 18 16 15 39 39 H 1.09002 * 109.47378 * 295.00580 * 18 16 15 40 40 H 1.07999 * 125.95743 * 0.02562 * 20 19 18 41 41 H 1.08002 * 125.53021 * 179.85853 * 22 21 20 42 42 H 1.09001 * 113.61471 * 156.33903 * 24 13 12 43 43 H 1.09004 * 113.61994 * 25.42949 * 24 13 12 44 44 H 1.08000 * 120.08476 * 179.72837 * 25 7 6 45 45 H 1.07993 * 119.91351 * 180.20897 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5947 -2.0354 -1.4461 6 6 2.0508 -2.6924 -2.5693 7 6 2.8549 -2.0163 -3.4921 8 6 3.3464 -2.7105 -4.6935 9 6 4.1219 -2.0554 -5.5807 10 6 4.6113 -2.7462 -6.7755 11 8 4.3176 -3.9114 -6.9679 12 7 5.3870 -2.0914 -7.6621 13 6 5.8761 -2.7824 -8.8578 14 1 5.2543 -3.6315 -9.1414 15 6 6.1983 -1.8370 -10.0270 16 6 7.6173 -1.7276 -9.4446 17 1 7.7297 -0.9242 -8.7166 18 6 8.7176 -1.7241 -10.5077 19 7 10.0154 -1.4975 -9.8668 20 6 11.1078 -2.2751 -9.9622 21 7 12.0586 -1.7285 -9.2487 22 6 11.6103 -0.6110 -8.6785 23 7 10.3649 -0.4253 -9.0298 24 6 7.3783 -3.1077 -8.8099 25 6 3.1945 -0.6789 -3.2648 26 6 2.7270 -0.0344 -2.1390 27 1 -0.3934 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4678 1.2086 30 1 3.5346 1.7703 -0.0322 31 1 0.9739 -2.5564 -0.7322 32 1 1.7876 -3.7265 -2.7359 33 1 3.0865 -3.7448 -4.8639 34 1 4.3828 -1.0215 -5.4097 35 1 5.6207 -1.1625 -7.5090 36 1 5.6410 -0.9006 -9.9978 37 1 6.1631 -2.3201 -11.0035 38 1 8.5244 -0.9291 -11.2280 39 1 8.7292 -2.6852 -11.0218 40 1 11.1878 -3.1892 -10.5318 41 1 12.1841 0.0388 -8.0342 42 1 7.6656 -3.9397 -9.4529 43 1 7.7737 -3.1974 -7.7980 44 1 3.8188 -0.1514 -3.9708 45 1 2.9857 0.9994 -1.9638 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12360594.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:39 Heat of formation + Delta-G solvation = 99.967614 kcal Electronic energy + Delta-G solvation = -27286.346910 eV Core-core repulsion = 23273.769486 eV Total energy + Delta-G solvation = -4012.577423 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.153 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.00394 -41.39985 -40.71353 -39.56721 -37.83572 -35.48990 -35.09279 -33.87404 -32.31060 -32.13674 -31.32300 -29.26661 -27.25680 -26.95980 -25.05638 -24.18238 -23.77969 -22.96753 -22.46836 -22.16650 -20.57195 -20.30206 -18.95992 -18.44494 -18.11216 -17.37710 -17.10501 -16.80751 -16.60396 -16.28262 -16.04293 -16.00405 -15.88621 -15.56546 -15.23661 -15.15206 -15.00051 -14.77837 -14.65834 -14.20498 -14.01226 -13.88862 -13.70279 -13.39886 -13.33223 -13.06883 -12.90144 -12.32799 -12.30673 -12.06981 -11.87328 -11.78204 -11.61046 -11.40269 -11.00105 -10.92717 -10.73366 -10.58028 -10.51144 -10.15123 -10.08909 -9.32769 -5.11228 -0.62083 0.28754 0.67266 0.84429 1.21295 1.29963 1.55820 1.90679 2.04180 2.04997 2.21772 2.73175 3.16480 3.25113 3.28577 3.35382 3.39987 3.46881 3.56064 3.60807 3.70947 3.78192 3.79359 3.93604 4.01116 4.06228 4.10551 4.22972 4.23244 4.34759 4.36600 4.43132 4.45843 4.48229 4.66422 4.73872 4.79394 4.82854 4.86683 4.96744 5.01030 5.05091 5.27469 5.28643 5.38293 5.47159 5.47821 5.51957 5.79211 5.81268 6.42040 6.48687 7.13767 7.17778 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.071 4.071 3 Si 0.689 3.311 4 C -0.107 4.107 5 C -0.095 4.095 6 C -0.091 4.091 7 C -0.074 4.074 8 C -0.013 4.013 9 C -0.217 4.217 10 C 0.552 3.448 11 O -0.541 6.541 12 N -0.710 5.710 13 C 0.123 3.877 14 H 0.108 0.892 15 C -0.136 4.136 16 C -0.124 4.124 17 H 0.105 0.895 18 C 0.138 3.862 19 N -0.377 5.377 20 C 0.253 3.747 21 N -0.547 5.547 22 C 0.198 3.802 23 N -0.319 5.319 24 C -0.148 4.148 25 C -0.095 4.095 26 C -0.120 4.120 27 H 0.380 0.620 28 H 0.115 0.885 29 H -0.254 1.254 30 H -0.258 1.258 31 H 0.131 0.869 32 H 0.132 0.868 33 H 0.138 0.862 34 H 0.131 0.869 35 H 0.403 0.597 36 H 0.081 0.919 37 H 0.101 0.899 38 H 0.092 0.908 39 H 0.104 0.896 40 H 0.218 0.782 41 H 0.217 0.783 42 H 0.094 0.906 43 H 0.072 0.928 44 H 0.132 0.868 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.820 2.625 -3.917 5.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.591 3.409 4 C -0.107 4.107 5 C -0.113 4.113 6 C -0.109 4.109 7 C -0.074 4.074 8 C -0.032 4.032 9 C -0.237 4.237 10 C 0.341 3.659 11 O -0.419 6.419 12 N -0.361 5.361 13 C 0.017 3.983 14 H 0.126 0.874 15 C -0.175 4.175 16 C -0.143 4.143 17 H 0.123 0.877 18 C 0.016 3.984 19 N -0.168 5.168 20 C -0.043 4.043 21 N -0.274 5.274 22 C -0.105 4.105 23 N -0.147 5.147 24 C -0.187 4.187 25 C -0.113 4.113 26 C -0.137 4.137 27 H 0.227 0.773 28 H 0.133 0.867 29 H -0.179 1.179 30 H -0.183 1.183 31 H 0.149 0.851 32 H 0.150 0.850 33 H 0.156 0.844 34 H 0.149 0.851 35 H 0.237 0.763 36 H 0.099 0.901 37 H 0.120 0.880 38 H 0.110 0.890 39 H 0.123 0.877 40 H 0.234 0.766 41 H 0.233 0.767 42 H 0.112 0.888 43 H 0.091 0.909 44 H 0.149 0.851 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.631 2.550 -2.859 4.164 hybrid contribution 0.318 -0.296 0.053 0.438 sum -1.313 2.254 -2.806 3.831 Atomic orbital electron populations 1.86514 1.16920 1.81686 1.49293 1.25104 0.85391 1.10216 0.97483 0.94722 0.80959 0.77919 0.87307 1.20539 0.98226 0.95230 0.96744 1.20998 0.99037 0.93793 0.97453 1.21468 0.95999 1.00089 0.93386 1.19060 0.99306 0.93987 0.95081 1.22420 0.91017 0.99593 0.90183 1.22865 1.03693 1.01182 0.95976 1.18340 0.77853 0.86429 0.83239 1.90836 1.57980 1.16594 1.76519 1.45542 1.52114 1.15509 1.22924 1.21744 0.95129 0.96423 0.85004 0.87420 1.23347 0.94846 1.00760 0.98561 1.22982 0.93611 0.99600 0.98136 0.87683 1.21930 0.78304 1.03490 0.94694 1.50563 1.11978 1.17735 1.36496 1.26111 0.82636 0.97882 0.97718 1.70562 1.31141 1.10767 1.14939 1.26046 0.90456 0.94795 0.99154 1.78008 1.16532 1.08464 1.11713 1.23545 0.96409 0.96519 1.02182 1.21361 0.98920 0.93783 0.97211 1.20959 0.98552 0.99592 0.94608 0.77289 0.86721 1.17878 1.18255 0.85110 0.85030 0.84427 0.85148 0.76258 0.90076 0.88041 0.88959 0.87747 0.76594 0.76716 0.88788 0.90928 0.85065 0.85252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.13 12.76 -35.23 -0.45 -0.32 16 2 C -0.07 0.05 2.82 36.01 0.10 0.15 16 3 Si 0.69 -1.07 29.77 -169.99 -5.06 -6.13 16 4 C -0.11 0.05 5.40 -104.50 -0.56 -0.51 16 5 C -0.09 0.01 9.59 -39.65 -0.38 -0.37 16 6 C -0.09 0.02 9.80 -39.11 -0.38 -0.36 16 7 C -0.07 0.01 5.87 -105.06 -0.62 -0.60 16 8 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.11 9.41 -37.50 -0.35 -0.24 16 10 C 0.55 0.84 7.74 -12.96 -0.10 0.74 16 11 O -0.54 -2.97 15.83 5.20 0.08 -2.89 16 12 N -0.71 0.86 5.26 -54.41 -0.29 0.58 16 13 C 0.12 -0.20 4.32 -67.13 -0.29 -0.49 16 14 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 15 C -0.14 0.56 7.39 -25.92 -0.19 0.37 16 16 C -0.12 0.39 3.75 -89.81 -0.34 0.06 16 17 H 0.10 -0.16 8.00 -51.93 -0.42 -0.58 16 18 C 0.14 -0.48 6.39 -4.04 -0.03 -0.51 16 19 N -0.38 0.07 3.69 -62.63 -0.23 -0.16 16 20 C 0.25 -0.04 12.63 -90.65 -1.14 -1.18 16 21 N -0.55 -1.52 11.19 -15.83 -0.18 -1.70 16 22 C 0.20 0.40 13.03 -91.81 -1.20 -0.80 16 23 N -0.32 -0.73 12.45 29.29 0.36 -0.36 16 24 C -0.15 0.31 7.43 -25.92 -0.19 0.11 16 25 C -0.09 0.11 9.41 -39.11 -0.37 -0.26 16 26 C -0.12 0.14 8.65 -39.65 -0.34 -0.20 16 27 H 0.38 -1.55 8.70 45.56 0.40 -1.16 16 28 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 29 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 30 H -0.26 -0.19 7.11 56.52 0.40 0.22 16 31 H 0.13 -0.07 8.06 -52.49 -0.42 -0.50 16 32 H 0.13 -0.21 8.06 -52.48 -0.42 -0.64 16 33 H 0.14 0.10 7.52 -52.48 -0.39 -0.30 16 34 H 0.13 -0.42 6.07 -52.49 -0.32 -0.74 16 35 H 0.40 -1.41 8.68 -40.82 -0.35 -1.76 16 36 H 0.08 -0.34 8.14 -51.92 -0.42 -0.76 16 37 H 0.10 -0.54 8.10 -51.93 -0.42 -0.97 16 38 H 0.09 -0.36 8.14 -51.92 -0.42 -0.78 16 39 H 0.10 -0.64 7.79 -51.93 -0.40 -1.04 16 40 H 0.22 -0.96 8.06 -52.49 -0.42 -1.38 16 41 H 0.22 -0.22 8.06 -52.49 -0.42 -0.64 16 42 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 43 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.13 -0.43 6.17 -52.49 -0.32 -0.75 16 45 H 0.13 -0.39 4.85 -52.49 -0.25 -0.64 16 LS Contribution 384.11 15.07 5.79 5.79 Total: 0.00 -11.52 384.11 -12.56 -24.08 By element: Atomic # 1 Polarization: -8.57 SS G_CDS: -5.86 Total: -14.43 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -6.74 Total: -4.46 kcal Atomic # 7 Polarization: -1.32 SS G_CDS: -0.33 Total: -1.65 kcal Atomic # 8 Polarization: -2.84 SS G_CDS: -0.37 Total: -3.21 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.13 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -11.52 -12.56 -24.08 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12360594.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 124.049 kcal (2) G-P(sol) polarization free energy of solvation -11.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.082 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.968 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds