Wall clock time and date at job start Sun Mar 7 2021 04:39:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86298 * 109.46787 * 2 1 4 4 C 1.50692 * 109.47115 * 120.00169 * 2 1 3 5 5 C 1.38606 * 119.84470 * 195.02533 * 4 2 1 6 6 F 1.35105 * 119.91823 * 0.02562 * 5 4 2 7 7 C 1.38113 * 120.16968 * 179.74217 * 5 4 2 8 8 C 1.39619 * 119.84837 * 0.48847 * 7 5 4 9 9 C 1.47699 * 120.15493 * 179.76792 * 8 7 5 10 10 O 1.21571 * 120.00208 * 179.72207 * 9 8 7 11 11 N 1.34774 * 119.99850 * 359.71979 * 9 8 7 12 12 C 1.46506 * 120.00007 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.84456 * 336.19767 * 12 11 9 14 14 C 1.53778 * 113.61595 * 107.50172 * 12 11 9 15 15 C 1.53780 * 87.08368 * 89.11615 * 14 12 11 16 16 H 1.08998 * 113.69137 * 270.87545 * 15 14 12 17 17 C 1.52998 * 113.61559 * 139.97686 * 15 14 12 18 18 N 1.46499 * 109.46715 * 87.50767 * 17 15 14 19 19 C 1.34434 * 126.82568 * 125.00090 * 18 17 15 20 20 N 1.30825 * 108.08133 * 179.73483 * 19 18 17 21 21 C 1.33251 * 109.82850 * 359.97438 * 20 19 18 22 22 N 1.30709 * 108.94310 * 0.02562 * 21 20 19 23 23 C 1.53778 * 113.61397 * 205.00224 * 12 11 9 24 24 C 1.39841 * 119.69035 * 359.48587 * 8 7 5 25 25 F 1.35102 * 120.08590 * 180.25494 * 24 8 7 26 26 C 1.38235 * 119.84681 * 14.99773 * 4 2 1 27 27 H 0.96693 * 113.99768 * 300.00226 * 1 2 3 28 28 H 1.09002 * 109.46676 * 239.99888 * 2 1 3 29 29 H 1.48501 * 110.00286 * 299.99615 * 3 2 1 30 30 H 1.48496 * 110.00019 * 61.32324 * 3 2 1 31 31 H 1.08002 * 120.07992 * 180.24770 * 7 5 4 32 32 H 0.96998 * 120.00308 * 359.97438 * 11 9 8 33 33 H 1.09003 * 113.61488 * 334.56677 * 14 12 11 34 34 H 1.08996 * 113.61401 * 203.66916 * 14 12 11 35 35 H 1.09000 * 109.47326 * 327.50837 * 17 15 14 36 36 H 1.09001 * 109.47193 * 207.50220 * 17 15 14 37 37 H 1.08002 * 125.95419 * 359.69419 * 19 18 17 38 38 H 1.07997 * 125.52448 * 179.97438 * 21 20 19 39 39 H 1.09003 * 113.61213 * 156.33790 * 23 12 11 40 40 H 1.08994 * 113.61636 * 25.42695 * 23 12 11 41 41 H 1.08012 * 119.92127 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.2561 -0.5721 1.6142 6 9 4.0920 0.1990 0.8849 7 6 3.7222 -1.2159 2.7437 8 6 2.8583 -2.0159 3.4940 9 6 3.3510 -2.7116 4.7002 10 8 2.5950 -3.4035 5.3543 11 7 4.6386 -2.5795 5.0756 12 6 5.1275 -3.2700 6.2717 13 1 4.3329 -3.5019 6.9808 14 6 6.0468 -4.4631 5.9617 15 6 7.2184 -3.4675 5.9926 16 1 7.4275 -3.0072 5.0270 17 6 8.4734 -4.0188 6.6723 18 7 9.2895 -4.7316 5.6864 19 6 10.5826 -4.5059 5.3964 20 7 10.9445 -5.3538 4.4681 21 6 9.9146 -6.1337 4.1419 22 7 8.8783 -5.7909 4.8610 23 6 6.3504 -2.5958 6.9155 24 6 1.5229 -2.1507 3.1015 25 9 0.6787 -2.9187 3.8246 26 6 1.0688 -1.4965 1.9713 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2242 31 1 4.7537 -1.1040 3.0437 32 1 5.2419 -2.0278 4.5535 33 1 5.8741 -4.9039 4.9798 34 1 6.0831 -5.2051 6.7593 35 1 8.1838 -4.7047 7.4685 36 1 9.0497 -3.1953 7.0939 37 1 11.2126 -3.7550 5.8501 38 1 9.9329 -6.9208 3.4027 39 1 6.4698 -2.8273 7.9740 40 1 6.4230 -1.5291 6.7037 41 1 0.0378 -1.5998 1.6665 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:43 Heat of formation + Delta-G solvation = 4.346806 kcal Electronic energy + Delta-G solvation = -30196.735836 eV Core-core repulsion = 25524.867791 eV Total energy + Delta-G solvation = -4671.868045 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.118 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -50.50318 -50.01315 -43.01216 -41.68082 -40.54374 -39.43521 -37.84743 -35.57945 -34.26440 -32.89173 -32.14385 -31.53938 -29.34713 -27.97450 -26.95295 -25.01927 -24.34933 -23.79370 -22.91528 -22.48206 -22.13532 -20.57347 -19.72599 -19.12479 -18.59673 -18.37942 -17.95069 -17.50694 -17.40727 -17.00098 -16.83658 -16.67785 -16.29034 -16.10746 -15.93095 -15.87633 -15.75061 -15.60016 -15.33081 -15.18107 -14.80137 -14.55528 -14.23689 -14.14043 -13.89532 -13.70974 -13.37669 -13.23438 -13.07399 -12.96945 -12.70026 -12.42293 -12.08197 -11.88379 -11.49615 -11.30240 -11.12345 -10.94070 -10.75025 -10.64086 -10.37881 -10.24919 -9.83858 -4.89671 -0.86027 -0.40553 0.66523 1.00058 1.28758 1.41644 1.50140 1.73991 1.83994 2.04135 2.22923 2.62843 2.72519 2.94074 3.02876 3.05170 3.19671 3.28532 3.37496 3.39206 3.40831 3.56783 3.68018 3.80080 3.90933 3.95574 4.02407 4.16594 4.22360 4.27647 4.36194 4.43194 4.47837 4.50472 4.60324 4.62561 4.64564 4.75771 4.89468 4.96044 5.26679 5.29836 5.37108 5.47435 5.79708 6.11075 6.19009 6.95403 7.13210 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.080 4.080 3 Si 0.682 3.318 4 C -0.090 4.090 5 C 0.079 3.921 6 F -0.101 7.101 7 C -0.082 4.082 8 C -0.152 4.152 9 C 0.564 3.436 10 O -0.511 6.511 11 N -0.707 5.707 12 C 0.119 3.881 13 H 0.110 0.890 14 C -0.134 4.134 15 C -0.123 4.123 16 H 0.095 0.905 17 C 0.137 3.863 18 N -0.379 5.379 19 C 0.251 3.749 20 N -0.547 5.547 21 C 0.196 3.804 22 N -0.312 5.312 23 C -0.136 4.136 24 C 0.164 3.836 25 F -0.105 7.105 26 C -0.129 4.129 27 H 0.379 0.621 28 H 0.135 0.865 29 H -0.246 1.246 30 H -0.254 1.254 31 H 0.152 0.848 32 H 0.400 0.600 33 H 0.077 0.923 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.105 0.895 37 H 0.218 0.782 38 H 0.216 0.784 39 H 0.103 0.897 40 H 0.080 0.920 41 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.354 4.812 1.801 6.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.189 4.189 3 Si 0.580 3.420 4 C -0.091 4.091 5 C 0.060 3.940 6 F -0.079 7.079 7 C -0.102 4.102 8 C -0.156 4.156 9 C 0.350 3.650 10 O -0.386 6.386 11 N -0.359 5.359 12 C 0.013 3.987 13 H 0.128 0.872 14 C -0.173 4.173 15 C -0.142 4.142 16 H 0.113 0.887 17 C 0.015 3.985 18 N -0.170 5.170 19 C -0.046 4.046 20 N -0.274 5.274 21 C -0.107 4.107 22 N -0.140 5.140 23 C -0.175 4.175 24 C 0.143 3.857 25 F -0.083 7.083 26 C -0.148 4.148 27 H 0.227 0.773 28 H 0.153 0.847 29 H -0.170 1.170 30 H -0.178 1.178 31 H 0.170 0.830 32 H 0.236 0.764 33 H 0.096 0.904 34 H 0.113 0.887 35 H 0.111 0.889 36 H 0.123 0.877 37 H 0.234 0.766 38 H 0.232 0.768 39 H 0.122 0.878 40 H 0.099 0.901 41 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges 3.237 4.494 1.615 5.769 hybrid contribution -0.558 0.130 0.376 0.686 sum 2.679 4.624 1.991 5.703 Atomic orbital electron populations 1.86625 1.16861 1.80112 1.49605 1.25099 0.84776 1.11620 0.97374 0.94568 0.92761 0.72885 0.81745 1.20471 0.92331 0.97918 0.98397 1.17078 0.87664 0.96549 0.92740 1.91212 1.69569 1.71309 1.75851 1.21082 1.00582 0.95356 0.93155 1.19826 0.93429 1.03439 0.98911 1.17805 0.82205 0.81020 0.83937 1.90898 1.55425 1.38516 1.53791 1.45500 1.10465 1.51110 1.28827 1.21879 0.96321 0.93285 0.87175 0.87209 1.23422 0.93713 0.96334 1.03830 1.22920 0.93185 0.98297 0.99822 0.88652 1.21916 0.91965 0.95768 0.88823 1.50601 1.09689 1.26179 1.30560 1.26129 0.84926 0.98865 0.94634 1.70569 1.31347 1.09087 1.16360 1.26077 0.85884 0.99464 0.99232 1.78095 1.23680 1.03796 1.08385 1.23362 0.94063 0.99847 1.00189 1.17621 0.86652 0.91124 0.90325 1.91657 1.69160 1.71649 1.75803 1.20869 1.02507 0.97583 0.93855 0.77262 0.84723 1.17025 1.17781 0.83003 0.76428 0.90428 0.88663 0.88897 0.87718 0.76587 0.76756 0.87831 0.90089 0.82073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.33 11.63 -35.23 -0.41 -0.08 16 2 C -0.08 0.13 2.96 36.00 0.11 0.23 16 3 Si 0.68 -0.97 29.56 -169.99 -5.02 -6.00 16 4 C -0.09 0.12 5.14 -104.49 -0.54 -0.41 16 5 C 0.08 -0.16 6.65 -39.49 -0.26 -0.43 16 6 F -0.10 0.28 13.69 2.25 0.03 0.31 16 7 C -0.08 0.21 9.52 -39.11 -0.37 -0.16 16 8 C -0.15 -0.02 5.88 -104.92 -0.62 -0.64 16 9 C 0.56 0.89 7.77 -12.40 -0.10 0.79 16 10 O -0.51 -2.96 14.94 5.30 0.08 -2.88 16 11 N -0.71 1.28 5.21 -54.01 -0.28 1.00 16 12 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 13 H 0.11 -0.03 7.46 -51.93 -0.39 -0.41 16 14 C -0.13 0.24 7.43 -25.92 -0.19 0.05 16 15 C -0.12 0.49 3.73 -89.80 -0.34 0.15 16 16 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 17 C 0.14 -0.57 6.39 -4.04 -0.03 -0.60 16 18 N -0.38 0.30 3.69 -62.63 -0.23 0.06 16 19 C 0.25 -0.21 12.63 -90.65 -1.14 -1.36 16 20 N -0.55 -1.23 11.19 -15.83 -0.18 -1.41 16 21 C 0.20 0.33 13.03 -91.81 -1.20 -0.86 16 22 N -0.31 -0.61 12.57 29.29 0.37 -0.24 16 23 C -0.14 0.67 7.39 -25.92 -0.19 0.48 16 24 C 0.16 0.21 7.28 -38.97 -0.28 -0.07 16 25 F -0.10 -0.42 15.55 2.25 0.04 -0.39 16 26 C -0.13 0.08 9.20 -39.57 -0.36 -0.29 16 27 H 0.38 -1.38 8.42 45.56 0.38 -1.00 16 28 H 0.14 -0.32 7.96 -51.93 -0.41 -0.73 16 29 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 30 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 31 H 0.15 -0.86 6.40 -52.49 -0.34 -1.19 16 32 H 0.40 -1.82 6.73 -40.82 -0.27 -2.09 16 33 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 35 H 0.09 -0.40 7.84 -51.93 -0.41 -0.80 16 36 H 0.10 -0.73 8.09 -51.93 -0.42 -1.15 16 37 H 0.22 -1.13 8.06 -52.49 -0.42 -1.56 16 38 H 0.22 -0.24 8.06 -52.49 -0.42 -0.67 16 39 H 0.10 -0.61 8.10 -51.93 -0.42 -1.04 16 40 H 0.08 -0.45 8.14 -51.93 -0.42 -0.88 16 41 H 0.16 -0.26 7.06 -52.48 -0.37 -0.63 16 LS Contribution 358.07 15.07 5.40 5.40 Total: 0.00 -11.05 358.07 -10.38 -21.43 By element: Atomic # 1 Polarization: -9.21 SS G_CDS: -4.37 Total: -13.58 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -5.80 Total: -3.64 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -0.32 Total: -0.58 kcal Atomic # 8 Polarization: -2.63 SS G_CDS: -0.33 Total: -2.96 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.07 Total: -0.07 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.02 Total: -6.00 kcal Total LS contribution 5.40 Total: 5.40 kcal Total: -11.05 -10.38 -21.43 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.778 kcal (2) G-P(sol) polarization free energy of solvation -11.047 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.732 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.432 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.347 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds