Wall clock time and date at job start Sun Mar 7 2021 04:39:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86298 * 109.46787 * 2 1 4 4 C 1.50692 * 109.47115 * 120.00169 * 2 1 3 5 5 C 1.38606 * 119.84470 * 195.02533 * 4 2 1 6 6 F 1.35105 * 119.91823 * 0.02562 * 5 4 2 7 7 C 1.38113 * 120.16968 * 179.74217 * 5 4 2 8 8 C 1.39619 * 119.84837 * 0.48847 * 7 5 4 9 9 C 1.47699 * 120.15493 * 179.76792 * 8 7 5 10 10 O 1.21571 * 120.00208 * 179.72207 * 9 8 7 11 11 N 1.34774 * 119.99850 * 359.71979 * 9 8 7 12 12 C 1.46506 * 120.00007 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.84456 * 336.19767 * 12 11 9 14 14 C 1.53778 * 113.61595 * 107.50172 * 12 11 9 15 15 C 1.53780 * 87.08368 * 89.11615 * 14 12 11 16 16 H 1.08998 * 113.69137 * 270.87545 * 15 14 12 17 17 C 1.52998 * 113.61559 * 139.97686 * 15 14 12 18 18 N 1.46499 * 109.46715 * 87.50767 * 17 15 14 19 19 C 1.34434 * 126.82568 * 125.00090 * 18 17 15 20 20 N 1.30825 * 108.08133 * 179.73483 * 19 18 17 21 21 C 1.33251 * 109.82850 * 359.97438 * 20 19 18 22 22 N 1.30709 * 108.94310 * 0.02562 * 21 20 19 23 23 C 1.53778 * 113.61397 * 205.00224 * 12 11 9 24 24 C 1.39841 * 119.69035 * 359.48587 * 8 7 5 25 25 F 1.35102 * 120.08590 * 180.25494 * 24 8 7 26 26 C 1.38235 * 119.84681 * 14.99773 * 4 2 1 27 27 H 0.96693 * 113.99768 * 300.00226 * 1 2 3 28 28 H 1.09002 * 109.46676 * 239.99888 * 2 1 3 29 29 H 1.48501 * 110.00286 * 299.99615 * 3 2 1 30 30 H 1.48496 * 110.00019 * 61.32324 * 3 2 1 31 31 H 1.08002 * 120.07992 * 180.24770 * 7 5 4 32 32 H 0.96998 * 120.00308 * 359.97438 * 11 9 8 33 33 H 1.09003 * 113.61488 * 334.56677 * 14 12 11 34 34 H 1.08996 * 113.61401 * 203.66916 * 14 12 11 35 35 H 1.09000 * 109.47326 * 327.50837 * 17 15 14 36 36 H 1.09001 * 109.47193 * 207.50220 * 17 15 14 37 37 H 1.08002 * 125.95419 * 359.69419 * 19 18 17 38 38 H 1.07997 * 125.52448 * 179.97438 * 21 20 19 39 39 H 1.09003 * 113.61213 * 156.33790 * 23 12 11 40 40 H 1.08994 * 113.61636 * 25.42695 * 23 12 11 41 41 H 1.08012 * 119.92127 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.2561 -0.5721 1.6142 6 9 4.0920 0.1990 0.8849 7 6 3.7222 -1.2159 2.7437 8 6 2.8583 -2.0159 3.4940 9 6 3.3510 -2.7116 4.7002 10 8 2.5950 -3.4035 5.3543 11 7 4.6386 -2.5795 5.0756 12 6 5.1275 -3.2700 6.2717 13 1 4.3329 -3.5019 6.9808 14 6 6.0468 -4.4631 5.9617 15 6 7.2184 -3.4675 5.9926 16 1 7.4275 -3.0072 5.0270 17 6 8.4734 -4.0188 6.6723 18 7 9.2895 -4.7316 5.6864 19 6 10.5826 -4.5059 5.3964 20 7 10.9445 -5.3538 4.4681 21 6 9.9146 -6.1337 4.1419 22 7 8.8783 -5.7909 4.8610 23 6 6.3504 -2.5958 6.9155 24 6 1.5229 -2.1507 3.1015 25 9 0.6787 -2.9187 3.8246 26 6 1.0688 -1.4965 1.9713 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2242 31 1 4.7537 -1.1040 3.0437 32 1 5.2419 -2.0278 4.5535 33 1 5.8741 -4.9039 4.9798 34 1 6.0831 -5.2051 6.7593 35 1 8.1838 -4.7047 7.4685 36 1 9.0497 -3.1953 7.0939 37 1 11.2126 -3.7550 5.8501 38 1 9.9329 -6.9208 3.4027 39 1 6.4698 -2.8273 7.9740 40 1 6.4230 -1.5291 6.7037 41 1 0.0378 -1.5998 1.6665 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:43 Heat of formation + Delta-G solvation = 4.532443 kcal Electronic energy + Delta-G solvation = -30196.727786 eV Core-core repulsion = 25524.867791 eV Total energy + Delta-G solvation = -4671.859995 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.118 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -50.33635 -50.15358 -42.94117 -41.64926 -40.42198 -39.41450 -37.79733 -35.51004 -34.21977 -32.81169 -32.11720 -31.47206 -29.18330 -27.89069 -26.70917 -24.90428 -24.24848 -23.73716 -22.81900 -22.38046 -22.10350 -20.42565 -19.64433 -19.07654 -18.55718 -18.22604 -17.90020 -17.47550 -17.35940 -16.84639 -16.72736 -16.70721 -16.21080 -15.99691 -15.96130 -15.80001 -15.74412 -15.46993 -15.20936 -15.08137 -14.68525 -14.50952 -14.12825 -14.03251 -13.86540 -13.49848 -13.30994 -13.12076 -13.01170 -12.81657 -12.67041 -12.20116 -12.08690 -11.72803 -11.34029 -11.25610 -11.14701 -10.93119 -10.75394 -10.52638 -10.33253 -10.17880 -9.78368 -4.81953 -0.82337 -0.31665 0.75134 1.07552 1.42408 1.50283 1.54569 1.79907 1.88600 2.05197 2.24178 2.72634 2.79356 3.07246 3.12863 3.32755 3.40584 3.46157 3.49085 3.57786 3.66850 3.76611 3.80200 3.99308 4.15648 4.18253 4.25647 4.31882 4.39177 4.46656 4.56634 4.61973 4.68040 4.70755 4.72744 4.78226 4.84786 4.99168 5.05344 5.12391 5.35295 5.37116 5.49502 5.51833 5.99945 6.27552 6.33132 6.96441 7.18186 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.082 4.082 3 Si 0.749 3.251 4 C -0.088 4.088 5 C 0.086 3.914 6 F -0.090 7.090 7 C -0.066 4.066 8 C -0.160 4.160 9 C 0.559 3.441 10 O -0.565 6.565 11 N -0.689 5.689 12 C 0.107 3.893 13 H 0.086 0.914 14 C -0.139 4.139 15 C -0.110 4.110 16 H 0.095 0.905 17 C 0.130 3.870 18 N -0.378 5.378 19 C 0.257 3.743 20 N -0.586 5.586 21 C 0.183 3.817 22 N -0.344 5.344 23 C -0.112 4.112 24 C 0.135 3.865 25 F -0.130 7.130 26 C -0.127 4.127 27 H 0.391 0.609 28 H 0.147 0.853 29 H -0.288 1.288 30 H -0.281 1.281 31 H 0.187 0.813 32 H 0.416 0.584 33 H 0.048 0.952 34 H 0.090 0.910 35 H 0.094 0.906 36 H 0.145 0.855 37 H 0.259 0.741 38 H 0.227 0.773 39 H 0.120 0.880 40 H 0.100 0.900 41 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.512 6.624 2.158 9.537 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.190 4.190 3 Si 0.651 3.349 4 C -0.090 4.090 5 C 0.067 3.933 6 F -0.069 7.069 7 C -0.085 4.085 8 C -0.164 4.164 9 C 0.347 3.653 10 O -0.444 6.444 11 N -0.341 5.341 12 C 0.001 3.999 13 H 0.105 0.895 14 C -0.178 4.178 15 C -0.129 4.129 16 H 0.113 0.887 17 C 0.009 3.991 18 N -0.168 5.168 19 C -0.039 4.039 20 N -0.314 5.314 21 C -0.120 4.120 22 N -0.172 5.172 23 C -0.151 4.151 24 C 0.115 3.885 25 F -0.108 7.108 26 C -0.145 4.145 27 H 0.241 0.759 28 H 0.164 0.836 29 H -0.215 1.215 30 H -0.207 1.207 31 H 0.204 0.796 32 H 0.254 0.746 33 H 0.067 0.933 34 H 0.109 0.891 35 H 0.112 0.888 36 H 0.163 0.837 37 H 0.275 0.725 38 H 0.243 0.757 39 H 0.138 0.862 40 H 0.118 0.882 41 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 5.434 6.324 1.982 8.570 hybrid contribution -1.246 -0.374 0.246 1.324 sum 4.188 5.950 2.228 7.610 Atomic orbital electron populations 1.86597 1.17408 1.80413 1.50559 1.25211 0.84426 1.11593 0.97752 0.93923 0.91642 0.71400 0.77906 1.20522 0.92662 0.97598 0.98223 1.17068 0.87408 0.96190 0.92671 1.91241 1.69160 1.70906 1.75575 1.21329 1.01591 0.93529 0.92089 1.19808 0.93419 1.04219 0.98945 1.18101 0.82787 0.80478 0.83961 1.90868 1.56959 1.41024 1.55552 1.45394 1.09587 1.50355 1.28756 1.21991 0.96648 0.94250 0.86965 0.89544 1.23405 0.95632 0.96717 1.02035 1.22801 0.92637 0.97267 1.00201 0.88706 1.22265 0.92076 0.96712 0.88002 1.50780 1.10165 1.25488 1.30407 1.26903 0.85092 0.98492 0.93459 1.70545 1.32242 1.10439 1.18170 1.26405 0.85946 0.99980 0.99676 1.78022 1.24480 1.05310 1.09406 1.23291 0.90755 1.00438 1.00592 1.17973 0.87169 0.92150 0.91241 1.91587 1.69991 1.72607 1.76593 1.20873 1.02977 0.97420 0.93270 0.75929 0.83601 1.21528 1.20711 0.79559 0.74557 0.93293 0.89110 0.88804 0.83713 0.72519 0.75673 0.86219 0.88199 0.81594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.71 11.63 -148.98 -1.73 -1.02 16 2 C -0.08 0.31 2.96 71.23 0.21 0.52 16 3 Si 0.75 -2.39 29.56 68.60 2.03 -0.36 16 4 C -0.09 0.29 5.14 -19.78 -0.10 0.19 16 5 C 0.09 -0.48 6.65 22.33 0.15 -0.33 16 6 F -0.09 0.71 13.69 44.97 0.62 1.33 16 7 C -0.07 0.43 9.52 22.57 0.21 0.64 16 8 C -0.16 -0.15 5.88 -20.06 -0.12 -0.27 16 9 C 0.56 2.56 7.77 86.74 0.67 3.24 16 10 O -0.56 -8.25 14.94 -3.94 -0.06 -8.31 16 11 N -0.69 2.45 5.21 -443.05 -2.31 0.14 16 12 C 0.11 -0.39 4.32 45.51 0.20 -0.20 16 13 H 0.09 0.13 7.46 -2.39 -0.02 0.11 16 14 C -0.14 0.38 7.43 31.12 0.23 0.61 16 15 C -0.11 1.03 3.73 -10.26 -0.04 0.99 16 16 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 17 C 0.13 -1.36 6.39 86.38 0.55 -0.81 16 18 N -0.38 1.00 3.69 -352.06 -1.30 -0.30 16 19 C 0.26 -0.83 12.63 180.36 2.28 1.45 16 20 N -0.59 -2.56 11.19 -204.00 -2.28 -4.84 16 21 C 0.18 0.77 13.03 180.76 2.36 3.12 16 22 N -0.34 -1.52 12.57 -61.24 -0.77 -2.29 16 23 C -0.11 1.35 7.39 31.12 0.23 1.58 16 24 C 0.14 0.58 7.28 22.66 0.17 0.75 16 25 F -0.13 -1.45 15.55 44.97 0.70 -0.75 16 26 C -0.13 0.06 9.20 22.28 0.20 0.26 16 27 H 0.39 -2.77 8.42 -74.06 -0.62 -3.39 16 28 H 0.15 -0.86 7.96 -2.39 -0.02 -0.88 16 29 H -0.29 -1.11 7.11 99.48 0.71 -0.40 16 30 H -0.28 -0.38 7.11 99.48 0.71 0.33 16 31 H 0.19 -2.64 6.40 -2.91 -0.02 -2.66 16 32 H 0.42 -4.41 6.73 -92.71 -0.62 -5.03 16 33 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 34 H 0.09 -0.19 7.90 -2.39 -0.02 -0.21 16 35 H 0.09 -0.95 7.84 -2.39 -0.02 -0.97 16 36 H 0.15 -2.64 8.09 -2.39 -0.02 -2.66 16 37 H 0.26 -3.53 8.06 -2.91 -0.02 -3.55 16 38 H 0.23 -0.18 8.06 -2.91 -0.02 -0.20 16 39 H 0.12 -1.74 8.10 -2.39 -0.02 -1.76 16 40 H 0.10 -1.48 8.14 -2.39 -0.02 -1.50 16 41 H 0.17 -0.35 7.06 -2.90 -0.02 -0.37 16 Total: 0.00 -30.51 358.07 2.00 -28.51 By element: Atomic # 1 Polarization: -23.75 SS G_CDS: -0.09 Total: -23.84 kcal Atomic # 6 Polarization: 4.53 SS G_CDS: 7.20 Total: 11.73 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -6.66 Total: -7.29 kcal Atomic # 8 Polarization: -7.54 SS G_CDS: -1.79 Total: -9.33 kcal Atomic # 9 Polarization: -0.74 SS G_CDS: 1.31 Total: 0.58 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.03 Total: -0.36 kcal Total: -30.51 2.00 -28.51 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.044 kcal (2) G-P(sol) polarization free energy of solvation -30.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.512 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds