Wall clock time and date at job start Sun Mar 7 2021 04:39:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35658 * 116.99934 * 2 1 4 4 C 1.40135 * 120.14811 * 179.97438 * 3 2 1 5 5 C 1.47531 * 120.19331 * 0.04057 * 4 3 2 6 6 O 1.21589 * 120.00292 * 0.02562 * 5 4 3 7 7 N 1.34785 * 120.00267 * 180.02562 * 5 4 3 8 8 C 1.46491 * 120.00138 * 180.02562 * 7 5 4 9 9 H 1.09001 * 112.85387 * 23.80168 * 8 7 5 10 10 C 1.53785 * 113.61494 * 154.99794 * 8 7 5 11 11 C 1.53787 * 87.07868 * 89.11515 * 10 8 7 12 12 H 1.08999 * 113.61473 * 270.88379 * 11 10 8 13 13 C 1.53002 * 113.61246 * 140.06654 * 11 10 8 14 14 N 1.46493 * 109.46962 * 175.00033 * 13 11 10 15 15 C 1.34438 * 126.82243 * 124.71196 * 14 13 11 16 16 N 1.30832 * 108.07712 * 179.89161 * 15 14 13 17 17 C 1.33241 * 109.83029 * 0.38102 * 16 15 14 18 18 N 1.30720 * 108.94803 * 359.76172 * 17 16 15 19 19 C 1.53774 * 87.08012 * 25.43442 * 11 10 8 20 20 C 1.39714 * 119.61381 * 179.77672 * 4 3 2 21 21 C 1.37785 * 119.90709 * 0.51720 * 20 4 3 22 22 C 1.50703 * 119.84859 * 179.75167 * 21 20 4 23 23 O 1.42896 * 109.47055 * 299.72797 * 22 21 20 24 24 Si 1.86304 * 109.46911 * 179.72689 * 22 21 20 25 25 C 1.38548 * 120.30164 * 359.47600 * 21 20 4 26 26 C 1.38054 * 120.38804 * 0.25640 * 25 21 20 27 27 H 1.09003 * 109.47257 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47489 * 299.99909 * 1 2 3 29 29 H 1.09007 * 109.47005 * 59.99838 * 1 2 3 30 30 H 0.97000 * 119.99529 * 0.02562 * 7 5 4 31 31 H 1.08993 * 113.61784 * 203.66610 * 10 8 7 32 32 H 1.09002 * 113.61237 * 334.49120 * 10 8 7 33 33 H 1.08998 * 109.47218 * 295.00161 * 13 11 10 34 34 H 1.09006 * 109.47234 * 55.00001 * 13 11 10 35 35 H 1.08000 * 125.95932 * 0.03394 * 15 14 13 36 36 H 1.07996 * 125.53002 * 179.79592 * 17 16 15 37 37 H 1.09003 * 113.61698 * 220.01472 * 19 11 10 38 38 H 1.09004 * 113.61641 * 89.11778 * 19 11 10 39 39 H 1.07997 * 120.04492 * 180.24946 * 20 4 3 40 40 H 1.09002 * 109.47152 * 59.72605 * 22 21 20 41 41 H 0.96708 * 114.00101 * 299.99358 * 23 22 21 42 42 H 1.48501 * 109.99652 * 179.97438 * 24 22 21 43 43 H 1.48494 * 110.00064 * 301.31786 * 24 22 21 44 44 H 1.07998 * 119.80267 * 180.27167 * 25 21 20 45 45 H 1.08004 * 119.95631 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2857 0.0005 5 6 4.2549 0.0532 0.0002 6 8 3.7095 -1.0334 -0.0010 7 7 5.6005 0.1317 0.0013 8 6 6.4056 -1.0921 0.0004 9 1 5.8708 -1.9504 -0.4064 10 6 7.8115 -0.9041 -0.5940 11 6 8.2763 -0.5357 0.8249 12 1 8.1887 0.5269 1.0510 13 6 9.6472 -1.1095 1.1890 14 7 10.0526 -0.6082 2.5045 15 6 10.4056 -1.3435 3.5732 16 7 10.6999 -0.5245 4.5501 17 6 10.5395 0.7355 4.1475 18 7 10.1439 0.7359 2.9016 19 6 7.0974 -1.3754 1.3443 20 6 4.0667 2.5364 -0.0042 21 6 3.3037 3.6837 0.0014 22 6 3.9767 5.0321 0.0020 23 8 4.7917 5.1572 1.1691 24 14 2.6824 6.3721 0.0017 25 6 1.9205 3.6034 0.0008 26 6 1.2924 2.3740 -0.0001 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 6.0357 0.9986 0.0026 31 1 8.2525 -1.8263 -0.9723 32 1 7.8786 -0.0802 -1.3044 33 1 9.5899 -2.1976 1.2167 34 1 10.3794 -0.8031 0.4419 35 1 10.4423 -2.4220 3.6168 36 1 10.7092 1.6140 4.7522 37 1 6.5882 -0.9311 2.1996 38 1 7.3431 -2.4265 1.4959 39 1 5.1446 2.6038 -0.0079 40 1 4.5991 5.1279 -0.8878 41 1 4.3028 5.0820 2.0001 42 1 3.3333 7.7069 0.0029 43 1 1.8083 6.2338 -1.1907 44 1 1.3303 4.5078 0.0008 45 1 0.2138 2.3195 -0.0001 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12496546.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:47 Heat of formation + Delta-G solvation = 55.909012 kcal Electronic energy + Delta-G solvation = -29861.461562 eV Core-core repulsion = 25656.517563 eV Total energy + Delta-G solvation = -4204.943999 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.95085 -41.85304 -40.89652 -39.25459 -39.13750 -37.18547 -35.39942 -34.02041 -32.46959 -32.08221 -31.85575 -29.19393 -28.58067 -26.89838 -26.23792 -25.61143 -24.38426 -22.95320 -22.81987 -22.29586 -21.57503 -20.28407 -19.51072 -18.53227 -18.31710 -18.09908 -17.26630 -17.05964 -16.85936 -16.65601 -16.28779 -16.04015 -15.95843 -15.91068 -15.75573 -15.58366 -15.13691 -14.95786 -14.71360 -14.60819 -14.39853 -13.97276 -13.73619 -13.63797 -13.50626 -13.30479 -13.17949 -12.82054 -12.47931 -12.26420 -12.16111 -12.13417 -11.85983 -11.78001 -11.54247 -10.89109 -10.87537 -10.68138 -10.52741 -10.46319 -10.27163 -10.01987 -9.30972 -5.12913 -0.29018 0.16087 0.72563 1.20103 1.35213 1.53372 1.82225 1.89566 2.05640 2.10038 2.18673 2.68438 3.22168 3.30997 3.33633 3.34916 3.44769 3.46626 3.56655 3.62644 3.68165 3.83144 3.91844 3.98615 4.03315 4.06814 4.16624 4.17266 4.28326 4.31364 4.41524 4.44554 4.51515 4.54165 4.54176 4.59952 4.73607 4.83561 4.88142 4.90136 5.01846 5.07038 5.20201 5.32792 5.45965 5.53108 5.54480 5.86414 6.24912 6.48770 6.50449 7.18853 7.29668 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.565 3.435 6 O -0.514 6.514 7 N -0.714 5.714 8 C 0.126 3.874 9 H 0.108 0.892 10 C -0.137 4.137 11 C -0.124 4.124 12 H 0.105 0.895 13 C 0.138 3.862 14 N -0.377 5.377 15 C 0.253 3.747 16 N -0.547 5.547 17 C 0.198 3.802 18 N -0.318 5.318 19 C -0.147 4.147 20 C -0.019 4.019 21 C -0.168 4.168 22 C -0.063 4.063 23 O -0.540 6.540 24 Si 0.686 3.314 25 C -0.047 4.047 26 C -0.214 4.214 27 H 0.105 0.895 28 H 0.059 0.941 29 H 0.058 0.942 30 H 0.399 0.601 31 H 0.101 0.899 32 H 0.080 0.920 33 H 0.104 0.896 34 H 0.092 0.908 35 H 0.217 0.783 36 H 0.216 0.784 37 H 0.072 0.928 38 H 0.094 0.906 39 H 0.135 0.865 40 H 0.115 0.885 41 H 0.380 0.620 42 H -0.253 1.253 43 H -0.257 1.257 44 H 0.134 0.866 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.476 0.345 -0.991 2.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.190 6.190 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.353 3.647 6 O -0.389 6.389 7 N -0.367 5.367 8 C 0.020 3.980 9 H 0.126 0.874 10 C -0.176 4.176 11 C -0.144 4.144 12 H 0.123 0.877 13 C 0.016 3.984 14 N -0.168 5.168 15 C -0.044 4.044 16 N -0.274 5.274 17 C -0.105 4.105 18 N -0.146 5.146 19 C -0.186 4.186 20 C -0.038 4.038 21 C -0.169 4.169 22 C -0.174 4.174 23 O -0.345 6.345 24 Si 0.588 3.412 25 C -0.065 4.065 26 C -0.232 4.232 27 H 0.124 0.876 28 H 0.078 0.922 29 H 0.077 0.923 30 H 0.235 0.765 31 H 0.120 0.880 32 H 0.098 0.902 33 H 0.122 0.878 34 H 0.110 0.890 35 H 0.234 0.766 36 H 0.233 0.767 37 H 0.091 0.909 38 H 0.112 0.888 39 H 0.152 0.848 40 H 0.132 0.868 41 H 0.227 0.773 42 H -0.178 1.178 43 H -0.182 1.182 44 H 0.151 0.849 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.733 0.617 -2.043 3.468 hybrid contribution 0.338 0.004 -0.388 0.515 sum -2.395 0.621 -2.431 3.469 Atomic orbital electron populations 1.23242 0.78146 1.04783 1.01473 1.86380 1.21238 1.25178 1.86173 1.19083 0.90907 0.85085 0.90493 1.19300 0.90886 0.93799 1.13942 1.17944 0.81709 0.88720 0.76347 1.90846 1.71436 1.28576 1.48025 1.45566 1.05778 1.09053 1.76304 1.21721 0.90987 0.88654 0.96655 0.87394 1.23356 0.95079 1.03378 0.95777 1.22982 0.92660 1.01588 0.97119 0.87682 1.21921 0.96854 0.99136 0.80468 1.50566 1.49680 1.04390 1.12124 1.26101 0.95342 1.00131 0.82822 1.70562 1.25390 1.01054 1.30434 1.26045 0.97287 0.96098 0.91041 1.78027 1.25040 0.96032 1.15468 1.23541 0.96246 1.00540 0.98278 1.20961 0.99881 0.89867 0.93093 1.20133 0.93538 0.96057 1.07174 1.24967 1.01868 0.99194 0.91322 1.86510 1.37260 1.95363 1.15398 0.94781 0.80217 0.77698 0.88499 1.21005 0.93653 0.97363 0.94450 1.21237 1.00769 0.91550 1.09670 0.87643 0.92225 0.92332 0.76491 0.88043 0.90153 0.87764 0.88991 0.76629 0.76721 0.90880 0.88805 0.84759 0.86805 0.77278 1.17771 1.18226 0.84860 0.84085 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.94 8.57 -40.55 -0.35 -1.29 16 3 C 0.19 0.43 6.70 -38.70 -0.26 0.17 16 4 C -0.18 -0.38 5.89 -104.85 -0.62 -0.99 16 5 C 0.57 1.96 7.76 -12.47 -0.10 1.87 16 6 O -0.51 -3.67 14.76 -16.59 -0.24 -3.91 16 7 N -0.71 -0.21 5.21 -54.06 -0.28 -0.49 16 8 C 0.13 -0.08 4.32 -67.12 -0.29 -0.37 16 9 H 0.11 0.10 7.46 -51.93 -0.39 -0.29 16 10 C -0.14 0.44 7.39 -25.91 -0.19 0.25 16 11 C -0.12 0.29 3.75 -89.81 -0.34 -0.04 16 12 H 0.11 -0.06 8.00 -51.93 -0.42 -0.47 16 13 C 0.14 -0.40 6.39 -4.04 -0.03 -0.43 16 14 N -0.38 -0.13 3.69 -62.63 -0.23 -0.36 16 15 C 0.25 0.07 12.63 -90.65 -1.14 -1.07 16 16 N -0.55 -1.73 11.19 -15.83 -0.18 -1.91 16 17 C 0.20 0.49 13.03 -91.81 -1.20 -0.71 16 18 N -0.32 -0.91 12.45 29.29 0.36 -0.54 16 19 C -0.15 0.20 7.43 -25.92 -0.19 0.00 16 20 C -0.02 0.00 9.09 -39.20 -0.36 -0.36 16 21 C -0.17 0.13 5.38 -104.67 -0.56 -0.43 16 22 C -0.06 0.08 2.81 36.01 0.10 0.18 16 23 O -0.54 0.43 12.77 -35.23 -0.45 -0.02 16 24 Si 0.69 -1.34 29.77 -169.99 -5.06 -6.40 16 25 C -0.05 0.06 8.66 -39.53 -0.34 -0.28 16 26 C -0.21 0.08 9.03 -39.48 -0.36 -0.27 16 27 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 30 H 0.40 -0.64 6.73 -40.82 -0.27 -0.91 16 31 H 0.10 -0.47 8.10 -51.93 -0.42 -0.89 16 32 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.10 -0.58 7.79 -51.93 -0.40 -0.98 16 34 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.22 -0.87 8.06 -52.49 -0.42 -1.30 16 36 H 0.22 -0.12 8.06 -52.49 -0.42 -0.54 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 38 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 39 H 0.13 -0.21 6.40 -52.49 -0.34 -0.55 16 40 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 41 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 42 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 43 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 44 H 0.13 -0.45 4.85 -52.49 -0.25 -0.71 16 45 H 0.14 -0.37 6.30 -52.48 -0.33 -0.70 16 LS Contribution 376.91 15.07 5.68 5.68 Total: 0.00 -12.25 376.91 -11.41 -23.66 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -5.78 Total: -12.89 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -4.88 Total: -1.52 kcal Atomic # 7 Polarization: -2.99 SS G_CDS: -0.33 Total: -3.31 kcal Atomic # 8 Polarization: -4.18 SS G_CDS: -1.04 Total: -5.22 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.06 Total: -6.40 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -12.25 -11.41 -23.66 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12496546.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.568 kcal (2) G-P(sol) polarization free energy of solvation -12.252 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.316 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.407 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.659 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds