Wall clock time and date at job start Sun Mar 7 2021 04:39:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86306 * 109.46905 * 2 1 4 4 C 1.50702 * 109.47253 * 240.00240 * 2 1 3 5 5 C 1.35081 * 126.07337 * 105.24661 * 4 2 1 6 6 N 1.35043 * 107.97813 * 180.02562 * 5 4 2 7 7 C 1.46497 * 125.93306 * 179.97438 * 6 5 4 8 8 C 1.50704 * 109.46663 * 125.00065 * 7 6 5 9 9 O 1.21279 * 120.00132 * 0.02562 * 8 7 6 10 10 N 1.34777 * 119.99689 * 180.02562 * 8 7 6 11 11 C 1.46501 * 119.99957 * 180.02562 * 10 8 7 12 12 H 1.09002 * 112.85121 * 23.80564 * 11 10 8 13 13 C 1.53785 * 113.61601 * 155.00099 * 11 10 8 14 14 C 1.53781 * 87.07944 * 89.11467 * 13 11 10 15 15 H 1.08993 * 113.61353 * 270.88235 * 14 13 11 16 16 C 1.52997 * 113.61024 * 140.06483 * 14 13 11 17 17 N 1.46503 * 109.47236 * 174.99915 * 16 14 13 18 18 C 1.34421 * 126.82384 * 124.99669 * 17 16 14 19 19 N 1.30833 * 108.07871 * 179.97438 * 18 17 16 20 20 C 1.33244 * 109.82904 * 0.02562 * 19 18 17 21 21 N 1.30720 * 108.94163 * 359.74737 * 20 19 18 22 22 C 1.53779 * 87.08248 * 25.43338 * 14 13 11 23 23 N 1.40080 * 108.13490 * 359.79025 * 6 5 4 24 24 C 1.31618 * 108.10698 * 0.35411 * 23 6 5 25 25 C 1.48426 * 126.03470 * 179.90997 * 24 23 6 26 26 C 1.39322 * 120.11577 * 136.84349 * 25 24 23 27 27 C 1.38024 * 119.87492 * 180.02562 * 26 25 24 28 28 C 1.38312 * 120.12198 * 0.02562 * 27 26 25 29 29 C 1.38319 * 120.24086 * 0.02562 * 28 27 26 30 30 C 1.38025 * 120.12020 * 359.97438 * 29 28 27 31 31 H 0.96697 * 114.00113 * 299.99979 * 1 2 3 32 32 H 1.08999 * 109.47328 * 119.99470 * 2 1 3 33 33 H 1.48502 * 110.00019 * 178.67763 * 3 2 1 34 34 H 1.48502 * 110.00230 * 299.99961 * 3 2 1 35 35 H 1.07994 * 126.01440 * 0.02562 * 5 4 2 36 36 H 1.08992 * 109.47825 * 245.00252 * 7 6 5 37 37 H 1.08995 * 109.46971 * 5.00949 * 7 6 5 38 38 H 0.96999 * 120.00555 * 359.97438 * 10 8 7 39 39 H 1.09003 * 113.61393 * 203.66278 * 13 11 10 40 40 H 1.09000 * 113.60994 * 334.47975 * 13 11 10 41 41 H 1.09000 * 109.47339 * 295.00094 * 16 14 13 42 42 H 1.09003 * 109.47670 * 55.00231 * 16 14 13 43 43 H 1.08006 * 125.96517 * 0.02562 * 18 17 16 44 44 H 1.07999 * 125.52796 * 180.02562 * 20 19 18 45 45 H 1.09001 * 113.61607 * 220.01968 * 22 14 13 46 46 H 1.09002 * 113.61604 * 89.11413 * 22 14 13 47 47 H 1.07995 * 120.06414 * 0.04208 * 26 25 24 48 48 H 1.08005 * 119.93765 * 180.27151 * 27 26 25 49 49 H 1.07996 * 119.88369 * 179.97438 * 28 27 26 50 50 H 1.08003 * 119.94420 * 179.97438 * 29 28 27 51 51 H 1.08007 * 120.05825 * 179.97438 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4673 -0.1251 -2.3237 6 7 2.7907 -1.0990 -3.2016 7 6 3.3986 -0.9011 -4.5197 8 6 4.6619 -1.7170 -4.6177 9 8 5.0189 -2.3971 -3.6792 10 7 5.3949 -1.6908 -5.7484 11 6 6.6226 -2.4843 -5.8440 12 1 6.6316 -3.3341 -5.1616 13 6 7.0097 -2.8490 -7.2870 14 6 7.7967 -1.5284 -7.3261 15 1 7.2043 -0.6768 -7.6602 16 6 9.1408 -1.6373 -8.0489 17 7 9.7565 -0.3109 -8.1377 18 6 10.9823 0.0385 -7.7109 19 7 11.1565 1.3086 -7.9722 20 6 10.0685 1.8020 -8.5624 21 7 9.1851 0.8470 -8.6901 22 6 7.9071 -1.6400 -5.7964 23 7 2.4478 -2.3316 -2.6312 24 6 1.9251 -2.1023 -1.4452 25 6 1.4234 -3.1296 -0.4986 26 6 1.7205 -3.0337 0.8591 27 6 1.2518 -3.9920 1.7349 28 6 0.4890 -5.0465 1.2667 29 6 0.1919 -5.1471 -0.0805 30 6 0.6555 -4.1943 -0.9650 31 1 -0.3933 0.4417 0.7650 32 1 1.7924 -0.5137 0.8900 33 1 3.5346 1.7704 0.0322 34 1 1.5615 2.4680 -1.2085 35 1 2.6117 0.9351 -2.4700 36 1 2.6999 -1.2188 -5.2935 37 1 3.6361 0.1539 -4.6555 38 1 5.1092 -1.1471 -6.4992 39 1 7.6401 -3.7353 -7.3593 40 1 6.1629 -2.8747 -7.9729 41 1 9.7984 -2.3067 -7.4944 42 1 8.9828 -2.0323 -9.0525 43 1 11.6989 -0.6153 -7.2359 44 1 9.9394 2.8239 -8.8869 45 1 7.7850 -0.6882 -5.2792 46 1 8.7827 -2.1958 -5.4611 47 1 2.3162 -2.2108 1.2258 48 1 1.4779 -3.9163 2.7883 49 1 0.1246 -5.7944 1.9552 50 1 -0.4038 -5.9727 -0.4410 51 1 0.4232 -4.2741 -2.0168 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12622748.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:39:56 Heat of formation + Delta-G solvation = 178.252575 kcal Electronic energy + Delta-G solvation = -35443.267977 eV Core-core repulsion = 30735.705903 eV Total energy + Delta-G solvation = -4707.562074 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.174 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -43.05465 -42.47950 -41.42478 -39.83505 -39.47335 -37.57444 -35.56939 -34.84712 -33.98863 -32.34206 -32.18506 -31.83606 -31.36938 -29.56469 -28.52220 -27.04631 -25.98340 -24.88160 -23.98517 -23.31309 -23.02166 -22.53789 -22.16417 -21.55519 -20.78725 -20.45653 -18.75965 -18.44593 -18.28936 -18.21922 -17.58756 -17.15657 -16.86735 -16.72419 -16.21213 -16.14700 -15.98044 -15.79799 -15.51645 -15.36795 -15.24841 -15.10531 -15.08500 -14.82468 -14.44564 -14.26575 -14.19996 -14.11647 -13.93831 -13.76948 -13.54963 -13.45079 -13.32250 -12.95397 -12.62476 -12.40102 -12.18265 -12.01902 -11.95349 -11.81325 -11.69544 -11.63034 -11.26331 -10.97527 -10.78420 -10.65002 -10.56314 -10.28825 -10.11277 -9.72266 -9.69299 -9.21146 -5.01445 0.26791 0.62306 0.63376 0.77631 1.13943 1.24445 1.32305 1.34514 1.62007 1.81711 1.87189 1.96937 2.00273 3.03544 3.08349 3.16226 3.19602 3.21778 3.35323 3.37911 3.51441 3.54660 3.63175 3.70836 3.78326 3.81005 3.87356 3.95507 4.03300 4.16966 4.18641 4.19154 4.30193 4.32646 4.37048 4.38664 4.39915 4.56908 4.60437 4.67081 4.70644 4.73489 4.82743 4.87491 4.89864 5.09907 5.22526 5.24380 5.30358 5.39298 5.42941 5.69534 5.72663 5.74801 5.76198 5.78552 6.16609 6.18696 6.64966 6.78078 6.95949 7.08991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.030 4.030 3 Si 0.679 3.321 4 C -0.202 4.202 5 C 0.059 3.941 6 N -0.359 5.359 7 C 0.116 3.884 8 C 0.502 3.498 9 O -0.500 6.500 10 N -0.713 5.713 11 C 0.124 3.876 12 H 0.108 0.892 13 C -0.135 4.135 14 C -0.124 4.124 15 H 0.105 0.895 16 C 0.138 3.862 17 N -0.377 5.377 18 C 0.254 3.746 19 N -0.547 5.547 20 C 0.199 3.801 21 N -0.320 5.320 22 C -0.147 4.147 23 N -0.246 5.246 24 C 0.134 3.866 25 C -0.006 4.006 26 C -0.095 4.095 27 C -0.119 4.119 28 C -0.113 4.113 29 C -0.120 4.120 30 C -0.091 4.091 31 H 0.378 0.622 32 H 0.072 0.928 33 H -0.256 1.256 34 H -0.253 1.253 35 H 0.172 0.828 36 H 0.121 0.879 37 H 0.127 0.873 38 H 0.403 0.597 39 H 0.102 0.898 40 H 0.081 0.919 41 H 0.105 0.895 42 H 0.093 0.907 43 H 0.218 0.782 44 H 0.217 0.783 45 H 0.071 0.929 46 H 0.095 0.905 47 H 0.124 0.876 48 H 0.126 0.874 49 H 0.124 0.876 50 H 0.125 0.875 51 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.346 0.900 -0.128 0.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.142 4.142 3 Si 0.580 3.420 4 C -0.213 4.213 5 C -0.086 4.086 6 N -0.140 5.140 7 C -0.009 4.009 8 C 0.286 3.714 9 O -0.372 6.372 10 N -0.366 5.366 11 C 0.019 3.981 12 H 0.126 0.874 13 C -0.174 4.174 14 C -0.143 4.143 15 H 0.123 0.877 16 C 0.016 3.984 17 N -0.168 5.168 18 C -0.043 4.043 19 N -0.274 5.274 20 C -0.104 4.104 21 N -0.148 5.148 22 C -0.186 4.186 23 N -0.066 5.066 24 C -0.032 4.032 25 C -0.008 4.008 26 C -0.114 4.114 27 C -0.137 4.137 28 C -0.131 4.131 29 C -0.138 4.138 30 C -0.110 4.110 31 H 0.225 0.775 32 H 0.089 0.911 33 H -0.181 1.181 34 H -0.178 1.178 35 H 0.189 0.811 36 H 0.139 0.861 37 H 0.145 0.855 38 H 0.237 0.763 39 H 0.121 0.879 40 H 0.100 0.900 41 H 0.123 0.877 42 H 0.111 0.889 43 H 0.234 0.766 44 H 0.233 0.767 45 H 0.090 0.910 46 H 0.113 0.887 47 H 0.142 0.858 48 H 0.144 0.856 49 H 0.142 0.858 50 H 0.143 0.857 51 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 0.459 0.055 -1.708 1.769 hybrid contribution -0.034 0.339 -0.166 0.379 sum 0.425 0.394 -1.874 1.961 Atomic orbital electron populations 1.86543 1.17428 1.81711 1.49225 1.23984 0.85434 1.08901 0.95910 0.95271 0.80909 0.77837 0.87947 1.19393 1.11877 0.92488 0.97552 1.22140 1.01015 0.95049 0.90346 1.47792 1.48164 1.04303 1.13753 1.21506 0.94091 1.02260 0.83056 1.20531 0.84897 0.82885 0.83097 1.90838 1.69736 1.39773 1.36850 1.45560 1.25109 1.49149 1.16820 1.21768 0.83374 0.94808 0.98197 0.87395 1.23347 1.00459 0.97386 0.96218 1.22978 0.95642 0.99695 0.95955 0.87684 1.21920 0.94867 0.78813 1.02815 1.50560 1.12656 1.09676 1.43922 1.26118 0.87878 0.93480 0.96835 1.70572 1.27708 1.07952 1.21133 1.26055 0.87122 1.00232 0.97002 1.78005 1.22854 0.92523 1.21399 1.23540 0.98504 1.01312 0.95209 1.77799 1.18190 1.01350 1.09245 1.20632 0.97705 0.92232 0.92639 1.17686 0.98596 0.93118 0.91369 1.21109 0.99426 0.99006 0.91864 1.21064 0.98357 0.94619 0.99685 1.21253 0.98045 0.98137 0.95704 1.21101 1.00262 0.98964 0.93461 1.21169 0.96665 0.93218 0.99924 0.77494 0.91056 1.18051 1.17761 0.81106 0.86137 0.85510 0.76252 0.87943 0.89995 0.87727 0.88905 0.76583 0.76693 0.91001 0.88704 0.85803 0.85555 0.85809 0.85689 0.85931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.77 12.86 -35.23 -0.45 -1.23 16 2 C -0.03 -0.04 2.50 36.01 0.09 0.05 16 3 Si 0.68 -0.50 30.77 -169.99 -5.23 -5.73 16 4 C -0.20 -0.85 5.39 -104.76 -0.56 -1.42 16 5 C 0.06 0.18 9.96 -17.26 -0.17 0.01 16 6 N -0.36 -1.28 3.40 -62.59 -0.21 -1.50 16 7 C 0.12 -0.10 6.99 -5.19 -0.04 -0.14 16 8 C 0.50 0.66 7.86 -10.98 -0.09 0.57 16 9 O -0.50 -3.25 15.29 5.56 0.08 -3.17 16 10 N -0.71 1.39 5.26 -53.01 -0.28 1.11 16 11 C 0.12 -0.22 4.32 -67.11 -0.29 -0.51 16 12 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 13 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 14 C -0.12 0.43 3.75 -89.81 -0.34 0.09 16 15 H 0.10 -0.21 8.01 -51.93 -0.42 -0.63 16 16 C 0.14 -0.50 6.39 -4.04 -0.03 -0.53 16 17 N -0.38 0.14 3.69 -62.63 -0.23 -0.09 16 18 C 0.25 -0.07 12.63 -90.66 -1.14 -1.21 16 19 N -0.55 -1.43 11.19 -15.83 -0.18 -1.61 16 20 C 0.20 0.36 13.03 -91.80 -1.20 -0.84 16 21 N -0.32 -0.65 12.46 29.29 0.36 -0.28 16 22 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 23 N -0.25 -1.61 11.66 33.43 0.39 -1.23 16 24 C 0.13 0.80 6.67 -82.78 -0.55 0.25 16 25 C -0.01 -0.03 5.74 -104.90 -0.60 -0.63 16 26 C -0.09 -0.29 8.89 -39.26 -0.35 -0.64 16 27 C -0.12 -0.21 10.03 -39.63 -0.40 -0.61 16 28 C -0.11 -0.20 10.04 -39.52 -0.40 -0.59 16 29 C -0.12 -0.30 10.03 -39.63 -0.40 -0.70 16 30 C -0.09 -0.39 9.78 -39.26 -0.38 -0.77 16 31 H 0.38 -1.40 8.74 45.56 0.40 -1.00 16 32 H 0.07 0.00 5.57 -51.93 -0.29 -0.29 16 33 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 34 H -0.25 -0.37 7.04 56.52 0.40 0.03 16 35 H 0.17 0.07 6.35 -52.49 -0.33 -0.26 16 36 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 37 H 0.13 -0.58 8.07 -51.93 -0.42 -1.00 16 38 H 0.40 -1.92 8.70 -40.82 -0.36 -2.27 16 39 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 40 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 41 H 0.10 -0.64 7.79 -51.93 -0.40 -1.05 16 42 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 43 H 0.22 -0.98 8.06 -52.48 -0.42 -1.40 16 44 H 0.22 -0.27 8.06 -52.49 -0.42 -0.69 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 47 H 0.12 0.20 6.21 -52.49 -0.33 -0.12 16 48 H 0.13 -0.08 8.06 -52.48 -0.42 -0.50 16 49 H 0.12 -0.06 8.06 -52.49 -0.42 -0.48 16 50 H 0.13 0.06 8.06 -52.48 -0.42 -0.36 16 51 H 0.12 0.49 8.06 -52.48 -0.42 0.07 16 LS Contribution 433.38 15.07 6.53 6.53 Total: 0.00 -15.95 433.38 -13.23 -29.18 By element: Atomic # 1 Polarization: -8.10 SS G_CDS: -6.79 Total: -14.90 kcal Atomic # 6 Polarization: 0.13 SS G_CDS: -7.23 Total: -7.09 kcal Atomic # 7 Polarization: -3.45 SS G_CDS: -0.15 Total: -3.59 kcal Atomic # 8 Polarization: -4.03 SS G_CDS: -0.37 Total: -4.39 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: -5.23 Total: -5.73 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -15.95 -13.23 -29.18 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12622748.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 207.432 kcal (2) G-P(sol) polarization free energy of solvation -15.947 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 191.485 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.179 kcal (6) G-S(sol) free energy of system = (1) + (5) 178.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds