Wall clock time and date at job start Sun Mar 7 2021 04:40:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.39288 * 121.02866 * 2 1 4 4 C 1.46499 * 134.19963 * 359.94820 * 3 2 1 5 5 C 1.50698 * 126.59781 * 0.26836 * 4 3 2 6 6 O 1.42899 * 109.47357 * 285.03300 * 5 4 3 7 7 Si 1.86299 * 109.47048 * 165.02842 * 5 4 3 8 8 C 1.34176 * 106.79971 * 180.31841 * 4 3 2 9 9 N 1.36949 * 109.95472 * 0.02562 * 8 4 3 10 10 C 1.37154 * 110.11307 * 0.02562 * 9 8 4 11 11 N 1.32816 * 132.96830 * 180.02562 * 10 9 8 12 12 C 1.31312 * 121.89381 * 179.97438 * 11 10 9 13 13 C 1.39739 * 121.03054 * 179.75067 * 2 1 3 14 14 C 1.47669 * 120.45891 * 359.97438 * 13 2 1 15 15 O 1.21572 * 119.99690 * 353.70821 * 14 13 2 16 16 N 1.34781 * 120.00157 * 173.70788 * 14 13 2 17 17 C 1.46497 * 119.99606 * 179.97438 * 16 14 13 18 18 H 1.09000 * 112.84963 * 23.81174 * 17 16 14 19 19 C 1.53783 * 113.61235 * 155.00340 * 17 16 14 20 20 C 1.53782 * 87.08296 * 89.11594 * 19 17 16 21 21 H 1.09003 * 113.61435 * 270.80399 * 20 19 17 22 22 C 1.52991 * 113.61521 * 139.97994 * 20 19 17 23 23 N 1.46500 * 109.47187 * 176.52891 * 22 20 19 24 24 C 1.34434 * 126.82174 * 125.00270 * 23 22 20 25 25 N 1.30827 * 108.08048 * 179.97438 * 24 23 22 26 26 C 1.33248 * 109.82510 * 359.97438 * 25 24 23 27 27 N 1.30709 * 108.94962 * 359.75748 * 26 25 24 28 28 C 1.53789 * 87.17022 * 25.39076 * 20 19 17 29 29 H 1.09000 * 109.47325 * 263.95102 * 1 2 3 30 30 H 1.09004 * 109.47473 * 23.94733 * 1 2 3 31 31 H 1.08996 * 109.47270 * 143.95046 * 1 2 3 32 32 H 1.09000 * 109.46653 * 45.03097 * 5 4 3 33 33 H 0.96699 * 114.00122 * 299.99713 * 6 5 4 34 34 H 1.48498 * 110.00337 * 180.02562 * 7 5 4 35 35 H 1.48498 * 110.00107 * 301.32693 * 7 5 4 36 36 H 1.08002 * 125.02189 * 180.02562 * 8 4 3 37 37 H 0.96994 * 124.93912 * 180.02562 * 9 8 4 38 38 H 1.08001 * 119.31335 * 179.97438 * 12 11 10 39 39 H 0.97001 * 119.99559 * 0.02562 * 16 14 13 40 40 H 1.08999 * 113.61231 * 334.57139 * 19 17 16 41 41 H 1.08993 * 113.61735 * 203.66674 * 19 17 16 42 42 H 1.09004 * 109.47685 * 296.53220 * 22 20 19 43 43 H 1.08998 * 109.47243 * 56.53381 * 22 20 19 44 44 H 1.08001 * 125.96187 * 359.97438 * 24 23 22 45 45 H 1.08001 * 125.52288 * 179.97438 * 26 25 24 46 46 H 1.08997 * 113.60761 * 89.15897 * 28 20 19 47 47 H 1.09005 * 113.61306 * 220.06002 * 28 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1936 0.0000 4 6 1.8515 2.6102 -0.0009 5 6 0.4525 3.1704 0.0034 6 8 -0.1245 3.0210 -1.2954 7 14 0.5086 4.9773 0.4539 8 6 2.9946 3.3126 -0.0075 9 7 4.0668 2.4606 -0.0114 10 6 3.6347 1.1589 -0.0080 11 7 4.2719 -0.0064 -0.0091 12 6 3.6266 -1.1500 -0.0044 13 6 2.2273 -1.1974 0.0052 14 6 1.5225 -2.4950 0.0114 15 8 0.3128 -2.5290 0.1274 16 7 2.2202 -3.6416 -0.1115 17 6 1.5209 -4.9288 -0.1048 18 1 0.4769 -4.8449 -0.4067 19 6 2.2844 -6.0484 -0.8318 20 6 2.9648 -6.3506 0.5138 21 1 3.8806 -5.7826 0.6773 22 6 3.1350 -7.8453 0.7924 23 7 3.8628 -8.0277 2.0507 24 6 3.4642 -8.7453 3.1154 25 7 4.3920 -8.6589 4.0337 26 6 5.3940 -7.8987 3.5937 27 7 5.1187 -7.4932 2.3819 28 6 1.7288 -5.7347 1.1904 29 1 -0.3634 -0.1083 1.0219 30 1 -0.3634 0.9392 -0.4171 31 1 -0.3633 -0.8308 -0.6047 32 1 -0.1520 2.6325 0.7336 33 1 0.3624 3.4749 -1.9967 34 1 -0.8649 5.5416 0.4623 35 1 1.1358 5.1486 1.7890 36 1 3.0596 4.3907 -0.0095 37 1 4.9963 2.7375 -0.0160 38 1 4.1869 -2.0733 -0.0060 39 1 3.1855 -3.6143 -0.2037 40 1 2.9708 -5.6838 -1.5959 41 1 1.6430 -6.8546 -1.1875 42 1 2.1542 -8.3148 0.8687 43 1 3.6957 -8.3051 -0.0214 44 1 2.5393 -9.2968 3.1982 45 1 6.2900 -7.6594 4.1471 46 1 0.9352 -6.4551 1.3886 47 1 1.9673 -5.1172 2.0565 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12890568.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:40:11 Heat of formation + Delta-G solvation = 134.887377 kcal Electronic energy + Delta-G solvation = -32569.052009 eV Core-core repulsion = 28143.373239 eV Total energy + Delta-G solvation = -4425.678770 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.159 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.97872 -42.85995 -41.39745 -39.88374 -38.58794 -37.76816 -35.60345 -34.88986 -33.98676 -32.11145 -31.95037 -31.03532 -29.19306 -28.67077 -26.92972 -26.54608 -25.13848 -24.41563 -23.79663 -22.94315 -22.42274 -22.01335 -20.71037 -20.33871 -19.31270 -18.84216 -18.32195 -17.68858 -17.51375 -17.21374 -16.88121 -16.66302 -16.41476 -16.10567 -15.97107 -15.87555 -15.56270 -15.42730 -15.19666 -15.02397 -14.93169 -14.61866 -14.14813 -14.03853 -13.93358 -13.73507 -13.65206 -13.54483 -13.31608 -13.19759 -12.97141 -12.85275 -12.31087 -12.26078 -12.07322 -11.82283 -11.57823 -11.08649 -11.05043 -10.90066 -10.70703 -10.56594 -10.50659 -10.21077 -10.10795 -9.60814 -9.15351 -5.14309 -0.25024 -0.07124 0.70169 1.22467 1.32713 1.36390 1.55394 1.63519 1.88283 1.93825 2.00182 2.07686 2.82762 3.18950 3.25181 3.29908 3.31703 3.42551 3.42722 3.49876 3.59133 3.62966 3.70326 3.75105 3.81834 3.96597 4.03944 4.07562 4.20613 4.25981 4.26306 4.39171 4.48421 4.49099 4.51545 4.64660 4.68598 4.75525 4.83853 4.86572 4.93483 5.00401 5.05336 5.18668 5.30414 5.39702 5.45887 5.50552 5.57486 5.76569 5.84052 6.08427 6.41721 6.59072 6.84091 7.16503 7.20153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.086 3.914 3 C -0.150 4.150 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.538 6.538 7 Si 0.687 3.313 8 C 0.070 3.930 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.503 5.503 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.576 3.424 15 O -0.527 6.527 16 N -0.712 5.712 17 C 0.125 3.875 18 H 0.109 0.891 19 C -0.137 4.137 20 C -0.125 4.125 21 H 0.105 0.895 22 C 0.138 3.862 23 N -0.377 5.377 24 C 0.253 3.747 25 N -0.547 5.547 26 C 0.198 3.802 27 N -0.318 5.318 28 C -0.148 4.148 29 H 0.080 0.920 30 H 0.084 0.916 31 H 0.098 0.902 32 H 0.115 0.885 33 H 0.378 0.622 34 H -0.252 1.252 35 H -0.255 1.255 36 H 0.186 0.814 37 H 0.426 0.574 38 H 0.161 0.839 39 H 0.400 0.600 40 H 0.081 0.919 41 H 0.102 0.898 42 H 0.104 0.896 43 H 0.092 0.908 44 H 0.218 0.782 45 H 0.216 0.784 46 H 0.094 0.906 47 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.455 2.122 -4.057 4.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.078 3.922 3 C -0.157 4.157 4 C -0.188 4.188 5 C -0.147 4.147 6 O -0.343 6.343 7 Si 0.588 3.412 8 C -0.056 4.056 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.216 5.216 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.364 3.636 15 O -0.404 6.404 16 N -0.364 5.364 17 C 0.020 3.980 18 H 0.127 0.873 19 C -0.175 4.175 20 C -0.144 4.144 21 H 0.123 0.877 22 C 0.016 3.984 23 N -0.168 5.168 24 C -0.044 4.044 25 N -0.274 5.274 26 C -0.105 4.105 27 N -0.146 5.146 28 C -0.186 4.186 29 H 0.098 0.902 30 H 0.103 0.897 31 H 0.117 0.883 32 H 0.133 0.867 33 H 0.226 0.774 34 H -0.177 1.177 35 H -0.180 1.180 36 H 0.203 0.797 37 H 0.264 0.736 38 H 0.178 0.822 39 H 0.235 0.765 40 H 0.100 0.900 41 H 0.120 0.880 42 H 0.122 0.878 43 H 0.110 0.890 44 H 0.234 0.766 45 H 0.233 0.767 46 H 0.112 0.888 47 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 1.326 2.853 -3.258 4.529 hybrid contribution 0.142 -0.694 0.213 0.739 sum 1.468 2.159 -3.045 4.011 Atomic orbital electron populations 1.21273 0.88803 1.05095 1.03765 1.19915 0.97156 0.89149 0.86015 1.19486 0.92804 0.93562 1.09836 1.20679 0.95354 0.91056 1.11760 1.24461 0.90349 1.10749 0.89183 1.86513 1.53701 1.77886 1.16227 0.95303 0.84382 0.76625 0.84915 1.21734 0.84969 0.95803 1.03090 1.41517 1.09641 1.02692 1.63683 1.18496 0.89335 0.85901 0.98765 1.66434 1.40556 0.96011 1.18622 1.22496 0.90063 0.94448 0.91777 1.20404 0.94746 0.93676 1.15386 1.17867 0.86790 0.83181 0.75765 1.90761 1.13565 1.86994 1.49069 1.45558 1.10583 1.05035 1.75237 1.21784 0.98011 0.81890 0.96362 0.87259 1.23350 0.99596 0.98475 0.96112 1.22986 0.99504 0.94491 0.97411 0.87699 1.21920 0.96083 0.97703 0.82693 1.50564 1.14448 1.37208 1.14538 1.26103 0.99981 0.94900 0.83391 1.70566 1.03116 1.22906 1.30837 1.26044 0.99102 0.94510 0.90827 1.78012 0.96745 1.22698 1.17167 1.23571 0.97336 0.99618 0.98105 0.90176 0.89686 0.88343 0.86728 0.77449 1.17673 1.17964 0.79682 0.73554 0.82196 0.76473 0.90028 0.88002 0.87757 0.88980 0.76616 0.76739 0.88795 0.90879 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.42 8.45 36.01 0.30 -0.12 16 2 C 0.09 0.28 5.98 -103.67 -0.62 -0.34 16 3 C -0.15 -0.39 6.16 -105.12 -0.65 -1.04 16 4 C -0.18 0.00 5.57 -102.73 -0.57 -0.58 16 5 C -0.04 0.02 1.88 36.00 0.07 0.09 16 6 O -0.54 0.19 11.64 -35.23 -0.41 -0.22 16 7 Si 0.69 -1.57 30.77 -169.99 -5.23 -6.80 16 8 C 0.07 -0.16 10.44 -16.70 -0.17 -0.34 16 9 N -0.57 0.59 6.04 -12.12 -0.07 0.52 16 10 C 0.31 0.71 8.42 -155.72 -1.31 -0.61 16 11 N -0.50 -1.39 10.37 -11.96 -0.12 -1.52 16 12 C 0.18 0.23 10.67 -17.11 -0.18 0.05 16 13 C -0.23 -0.57 5.89 -104.82 -0.62 -1.18 16 14 C 0.58 1.39 7.72 -12.41 -0.10 1.30 16 15 O -0.53 -2.77 13.10 5.30 0.07 -2.70 16 16 N -0.71 0.50 5.21 -53.93 -0.28 0.22 16 17 C 0.13 -0.19 4.33 -67.03 -0.29 -0.48 16 18 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 19 C -0.14 0.54 7.39 -25.92 -0.19 0.35 16 20 C -0.12 0.37 3.74 -89.81 -0.34 0.04 16 21 H 0.10 -0.14 8.04 -51.93 -0.42 -0.56 16 22 C 0.14 -0.46 6.37 -4.05 -0.03 -0.49 16 23 N -0.38 -0.01 3.69 -62.63 -0.23 -0.24 16 24 C 0.25 0.02 12.63 -90.65 -1.14 -1.13 16 25 N -0.55 -1.65 11.19 -15.83 -0.18 -1.83 16 26 C 0.20 0.46 13.03 -91.81 -1.20 -0.74 16 27 N -0.32 -0.81 12.49 29.29 0.37 -0.45 16 28 C -0.15 0.29 7.44 -25.82 -0.19 0.10 16 29 H 0.08 0.26 8.14 -51.93 -0.42 -0.16 16 30 H 0.08 0.24 4.80 -51.93 -0.25 -0.01 16 31 H 0.10 0.43 5.97 -51.93 -0.31 0.12 16 32 H 0.12 0.05 7.15 -51.93 -0.37 -0.32 16 33 H 0.38 -1.63 8.70 45.56 0.40 -1.23 16 34 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 35 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 36 H 0.19 -1.19 6.36 -52.49 -0.33 -1.52 16 37 H 0.43 -1.53 8.96 -40.82 -0.37 -1.90 16 38 H 0.16 -0.33 6.43 -52.49 -0.34 -0.67 16 39 H 0.40 -1.09 6.78 -40.82 -0.28 -1.37 16 40 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 41 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 42 H 0.10 -0.62 7.82 -51.93 -0.41 -1.03 16 43 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 44 H 0.22 -0.92 8.06 -52.49 -0.42 -1.34 16 45 H 0.22 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.09 -0.29 7.92 -51.93 -0.41 -0.70 16 47 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 LS Contribution 387.96 15.07 5.85 5.85 Total: 0.00 -13.32 387.96 -13.09 -26.41 By element: Atomic # 1 Polarization: -8.50 SS G_CDS: -5.62 Total: -14.12 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -7.23 Total: -5.12 kcal Atomic # 7 Polarization: -2.77 SS G_CDS: -0.52 Total: -3.29 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -0.34 Total: -2.93 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.23 Total: -6.80 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -13.32 -13.09 -26.41 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12890568.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 161.298 kcal (2) G-P(sol) polarization free energy of solvation -13.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 147.982 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.095 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.411 kcal (6) G-S(sol) free energy of system = (1) + (5) 134.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds