Wall clock time and date at job start Sun Mar 7 2021 04:40:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.47292 * 2 1 4 4 C 1.50697 * 109.47426 * 120.00779 * 2 1 3 5 5 C 1.38334 * 119.87708 * 64.99367 * 4 2 1 6 6 C 1.37997 * 120.12909 * 180.02562 * 5 4 2 7 7 C 1.39400 * 119.87192 * 359.97438 * 6 5 4 8 8 C 1.48281 * 120.12733 * 179.97438 * 7 6 5 9 9 C 1.39502 * 119.97449 * 180.02562 * 8 7 6 10 10 C 1.37666 * 120.02236 * 179.97438 * 9 8 7 11 11 C 1.39708 * 119.97316 * 0.02562 * 10 9 8 12 12 C 1.47727 * 120.02186 * 180.02562 * 11 10 9 13 13 O 1.21572 * 120.00064 * 0.02562 * 12 11 10 14 14 N 1.34771 * 119.99860 * 179.97438 * 12 11 10 15 15 C 1.46504 * 119.99971 * 180.02562 * 14 12 11 16 16 H 1.09005 * 112.84724 * 336.19709 * 15 14 12 17 17 C 1.54049 * 113.68747 * 107.46997 * 15 14 12 18 18 C 1.53786 * 86.98426 * 89.12986 * 17 15 14 19 19 H 1.09002 * 113.61357 * 270.83585 * 18 17 15 20 20 C 1.53003 * 113.61503 * 140.01654 * 18 17 15 21 21 N 1.46504 * 109.46983 * 85.86203 * 20 18 17 22 22 C 1.34433 * 126.82011 * 124.99674 * 21 20 18 23 23 N 1.30832 * 108.07196 * 179.97438 * 22 21 20 24 24 C 1.33239 * 109.83428 * 0.02562 * 23 22 21 25 25 N 1.30719 * 108.94301 * 359.75174 * 24 23 22 26 26 C 1.53781 * 87.17350 * 25.42668 * 18 17 15 27 27 C 1.39705 * 119.95341 * 0.27982 * 11 10 9 28 28 C 1.37660 * 119.97669 * 359.44292 * 27 11 10 29 29 C 1.39401 * 119.74700 * 0.26190 * 7 6 5 30 30 C 1.38000 * 119.87098 * 359.50561 * 29 7 6 31 31 H 0.96698 * 113.99029 * 299.99752 * 1 2 3 32 32 H 1.09000 * 109.46905 * 240.00597 * 2 1 3 33 33 H 1.48500 * 110.00055 * 178.68671 * 3 2 1 34 34 H 1.48501 * 110.00099 * 300.00651 * 3 2 1 35 35 H 1.08007 * 119.92981 * 0.02562 * 5 4 2 36 36 H 1.07997 * 120.06241 * 179.97438 * 6 5 4 37 37 H 1.07999 * 119.99039 * 0.02562 * 9 8 7 38 38 H 1.07995 * 120.01391 * 180.02562 * 10 9 8 39 39 H 0.97002 * 120.00225 * 0.02562 * 14 12 11 40 40 H 1.08992 * 113.69868 * 334.61096 * 17 15 14 41 41 H 1.09000 * 113.61076 * 203.62855 * 17 15 14 42 42 H 1.09000 * 109.47107 * 205.86243 * 20 18 17 43 43 H 1.08997 * 109.47112 * 325.86394 * 20 18 17 44 44 H 1.07989 * 125.96131 * 0.02562 * 22 21 20 45 45 H 1.07993 * 125.52935 * 180.02562 * 24 23 22 46 46 H 1.08999 * 113.61567 * 89.07405 * 26 18 17 47 47 H 1.08998 * 113.61196 * 219.97759 * 26 18 17 48 48 H 1.08008 * 120.01108 * 179.70430 * 27 11 10 49 49 H 1.08003 * 119.99256 * 180.25753 * 28 27 11 50 50 H 1.08003 * 120.06740 * 179.74867 * 29 7 6 51 51 H 1.08002 * 119.94236 * 180.23997 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 1.6831 -2.0613 1.3956 6 6 2.1403 -2.7171 2.5205 7 6 2.8541 -2.0157 3.4910 8 6 3.3475 -2.7146 4.7022 9 6 4.0610 -2.0095 5.6716 10 6 4.5190 -2.6572 6.7967 11 6 4.2696 -4.0212 6.9671 12 6 4.7601 -4.7172 8.1743 13 8 5.3808 -4.1029 9.0201 14 7 4.5188 -6.0329 8.3384 15 6 5.0048 -6.7231 9.5358 16 1 5.8580 -6.2238 9.9951 17 6 3.8907 -7.0866 10.5356 18 6 3.7441 -8.4102 9.7664 19 1 3.0364 -8.3582 8.9390 20 6 3.5127 -9.6224 10.6709 21 7 2.0818 -9.7517 10.9576 22 6 1.3129 -10.8344 10.7485 23 7 0.0960 -10.5487 11.1347 24 6 0.0491 -9.2986 11.5935 25 7 1.2421 -8.7709 11.5100 26 6 5.2097 -8.2339 9.3355 27 6 3.5604 -4.7277 5.9925 28 6 3.0984 -4.0768 4.8710 29 6 3.0970 -0.6536 3.3214 30 6 2.6391 -0.0094 2.1902 31 1 -0.3932 0.4417 0.7651 32 1 1.7923 -0.5137 -0.8901 33 1 3.5347 1.7702 0.0320 34 1 1.5615 2.4680 -1.2084 35 1 1.1303 -2.6037 0.6428 36 1 1.9455 -3.7716 2.6487 37 1 4.2533 -0.9550 5.5399 38 1 5.0710 -2.1111 7.5473 39 1 4.0232 -6.5230 7.6637 40 1 3.0139 -6.4427 10.4678 41 1 4.2461 -7.2131 11.5583 42 1 3.8655 -10.5231 10.1686 43 1 4.0596 -9.4889 11.6042 44 1 1.6424 -11.7759 10.3347 45 1 -0.8308 -8.8034 11.9766 46 1 5.9251 -8.6734 10.0306 47 1 5.3970 -8.5156 8.2993 48 1 3.3712 -5.7832 6.1210 49 1 2.5465 -4.6218 4.1194 50 1 3.6460 -0.1043 4.0720 51 1 2.8301 1.0451 2.0558 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13158362.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:40:16 Heat of formation + Delta-G solvation = 112.961850 kcal Electronic energy + Delta-G solvation = -33624.309570 eV Core-core repulsion = 29072.079579 eV Total energy + Delta-G solvation = -4552.229991 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.168 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.99599 -41.66421 -41.00091 -40.03798 -38.95214 -37.56302 -35.52178 -34.37042 -33.68918 -32.64472 -32.12941 -31.67206 -30.90676 -29.16162 -27.08583 -26.90416 -25.09883 -24.75867 -24.16660 -22.90021 -22.72302 -22.54145 -22.38456 -21.43973 -20.46297 -19.34855 -18.54783 -18.29283 -17.83735 -17.30345 -16.93210 -16.87978 -16.50222 -16.24330 -16.14976 -16.01030 -15.90043 -15.56692 -15.43684 -15.35622 -15.07151 -15.01433 -14.92962 -14.75170 -14.41134 -14.30042 -14.14062 -14.09908 -13.66769 -13.62237 -13.32738 -13.12153 -12.97465 -12.80508 -12.61573 -12.38331 -12.06132 -12.03569 -11.82606 -11.69933 -11.44906 -11.00167 -10.92685 -10.81017 -10.73343 -10.62096 -10.47123 -10.15389 -10.14555 -10.06238 -9.14865 -5.08811 -0.74567 0.25241 0.29974 0.45416 0.68053 1.23159 1.30500 1.58423 1.80218 1.92807 1.96764 2.05469 2.54889 2.93617 3.08896 3.24489 3.31311 3.38953 3.41925 3.43202 3.49618 3.56396 3.62185 3.71560 3.74700 3.83355 3.87065 3.91964 3.93826 3.97378 4.13723 4.17876 4.19854 4.25092 4.38148 4.41688 4.47574 4.53348 4.54329 4.58000 4.65707 4.76448 4.81183 4.81702 4.95026 4.95935 5.00569 5.05126 5.10767 5.19377 5.29213 5.32431 5.39964 5.46472 5.49053 5.55866 5.71207 5.81222 5.82051 6.36969 6.50269 7.13373 7.14623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.070 4.070 3 Si 0.686 3.314 4 C -0.114 4.114 5 C -0.090 4.090 6 C -0.105 4.105 7 C -0.050 4.050 8 C -0.016 4.016 9 C -0.118 4.118 10 C -0.053 4.053 11 C -0.137 4.137 12 C 0.563 3.437 13 O -0.530 6.530 14 N -0.710 5.710 15 C 0.118 3.882 16 H 0.108 0.892 17 C -0.134 4.134 18 C -0.123 4.123 19 H 0.094 0.906 20 C 0.137 3.863 21 N -0.378 5.378 22 C 0.251 3.749 23 N -0.547 5.547 24 C 0.196 3.804 25 N -0.312 5.312 26 C -0.136 4.136 27 C -0.082 4.082 28 C -0.118 4.118 29 C -0.100 4.100 30 C -0.113 4.113 31 H 0.380 0.620 32 H 0.114 0.886 33 H -0.257 1.257 34 H -0.254 1.254 35 H 0.129 0.871 36 H 0.129 0.871 37 H 0.135 0.865 38 H 0.141 0.859 39 H 0.400 0.600 40 H 0.076 0.924 41 H 0.094 0.906 42 H 0.104 0.896 43 H 0.093 0.907 44 H 0.218 0.782 45 H 0.216 0.784 46 H 0.102 0.898 47 H 0.079 0.921 48 H 0.126 0.874 49 H 0.133 0.867 50 H 0.132 0.868 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.245 -2.297 -1.320 2.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.588 3.412 4 C -0.114 4.114 5 C -0.108 4.108 6 C -0.122 4.122 7 C -0.050 4.050 8 C -0.017 4.017 9 C -0.136 4.136 10 C -0.072 4.072 11 C -0.140 4.140 12 C 0.351 3.649 13 O -0.407 6.407 14 N -0.362 5.362 15 C 0.013 3.987 16 H 0.126 0.874 17 C -0.172 4.172 18 C -0.142 4.142 19 H 0.112 0.888 20 C 0.015 3.985 21 N -0.169 5.169 22 C -0.046 4.046 23 N -0.274 5.274 24 C -0.107 4.107 25 N -0.139 5.139 26 C -0.175 4.175 27 C -0.100 4.100 28 C -0.136 4.136 29 C -0.118 4.118 30 C -0.131 4.131 31 H 0.227 0.773 32 H 0.131 0.869 33 H -0.182 1.182 34 H -0.179 1.179 35 H 0.147 0.853 36 H 0.147 0.853 37 H 0.153 0.847 38 H 0.158 0.842 39 H 0.235 0.765 40 H 0.095 0.905 41 H 0.112 0.888 42 H 0.122 0.878 43 H 0.111 0.889 44 H 0.234 0.766 45 H 0.232 0.768 46 H 0.121 0.879 47 H 0.098 0.902 48 H 0.144 0.856 49 H 0.151 0.849 50 H 0.150 0.850 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.257 -1.057 -1.480 2.899 hybrid contribution -0.084 -1.227 -0.600 1.369 sum 2.174 -2.284 -2.080 3.778 Atomic orbital electron populations 1.86516 1.16963 1.81705 1.49264 1.25078 0.85345 1.10168 0.97457 0.94754 0.81120 0.78004 0.87366 1.20462 0.99138 0.95039 0.96764 1.20975 0.98588 0.93744 0.97539 1.21311 0.97309 1.00115 0.93505 1.18815 0.98829 0.93501 0.93811 1.18995 0.96136 0.93290 0.93237 1.21253 0.98318 1.00523 0.93458 1.21233 0.96141 0.92893 0.96912 1.19945 1.03279 0.95123 0.95627 1.18263 0.79104 0.81631 0.85921 1.90806 1.40216 1.65817 1.43893 1.45559 1.57977 1.09450 1.23178 1.21900 0.98149 0.92390 0.86273 0.87374 1.23453 0.99423 0.95810 0.98547 1.22911 0.97705 0.94783 0.98830 0.88755 1.21918 0.75558 1.00320 1.00680 1.50596 1.10020 1.10035 1.46297 1.26125 0.86824 0.94143 0.97519 1.70562 1.20086 1.16190 1.20544 1.26074 0.96255 0.90038 0.98332 1.78100 1.02429 1.13381 1.20010 1.23351 0.95752 0.95365 1.03040 1.21175 0.96125 0.99481 0.93248 1.21158 1.00627 0.93771 0.98055 1.21230 0.99354 0.93586 0.97606 1.20946 0.98662 0.99364 0.94087 0.77310 0.86859 1.18196 1.17875 0.85299 0.85320 0.84680 0.84169 0.76476 0.90486 0.88772 0.87760 0.88900 0.76602 0.76758 0.87928 0.90194 0.85583 0.84918 0.84992 0.85237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.05 12.83 -35.23 -0.45 -0.40 16 2 C -0.07 0.04 2.80 36.00 0.10 0.14 16 3 Si 0.69 -0.92 29.79 -169.99 -5.06 -5.99 16 4 C -0.11 0.04 5.36 -104.55 -0.56 -0.52 16 5 C -0.09 0.01 9.67 -39.63 -0.38 -0.37 16 6 C -0.10 0.05 9.43 -39.24 -0.37 -0.32 16 7 C -0.05 0.00 5.88 -104.90 -0.62 -0.61 16 8 C -0.02 0.00 5.88 -104.82 -0.62 -0.62 16 9 C -0.12 0.02 9.41 -39.32 -0.37 -0.35 16 10 C -0.05 -0.06 9.58 -39.24 -0.38 -0.43 16 11 C -0.14 -0.13 5.88 -104.92 -0.62 -0.75 16 12 C 0.56 1.27 7.77 -12.39 -0.10 1.17 16 13 O -0.53 -3.17 15.93 5.30 0.08 -3.08 16 14 N -0.71 0.56 5.22 -53.86 -0.28 0.28 16 15 C 0.12 -0.15 4.33 -66.97 -0.29 -0.44 16 16 H 0.11 0.05 7.46 -51.93 -0.39 -0.33 16 17 C -0.13 0.15 7.45 -25.77 -0.19 -0.05 16 18 C -0.12 0.40 3.73 -89.80 -0.33 0.07 16 19 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 20 C 0.14 -0.50 6.37 -4.04 -0.03 -0.53 16 21 N -0.38 0.13 3.69 -62.63 -0.23 -0.10 16 22 C 0.25 -0.12 12.63 -90.65 -1.14 -1.26 16 23 N -0.55 -1.41 11.19 -15.83 -0.18 -1.59 16 24 C 0.20 0.40 13.03 -91.81 -1.20 -0.80 16 25 N -0.31 -0.73 12.57 29.29 0.37 -0.36 16 26 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 27 C -0.08 0.09 9.52 -39.25 -0.37 -0.29 16 28 C -0.12 0.11 9.41 -39.32 -0.37 -0.26 16 29 C -0.10 0.08 9.43 -39.24 -0.37 -0.29 16 30 C -0.11 0.12 8.65 -39.63 -0.34 -0.22 16 31 H 0.38 -1.47 8.70 45.56 0.40 -1.08 16 32 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 33 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 34 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 35 H 0.13 -0.10 8.06 -52.48 -0.42 -0.52 16 36 H 0.13 -0.29 6.19 -52.49 -0.33 -0.61 16 37 H 0.14 -0.29 6.19 -52.49 -0.32 -0.61 16 38 H 0.14 0.16 7.64 -52.49 -0.40 -0.24 16 39 H 0.40 -1.26 6.72 -40.82 -0.27 -1.54 16 40 H 0.08 0.10 8.14 -51.93 -0.42 -0.32 16 41 H 0.09 -0.11 7.92 -51.93 -0.41 -0.52 16 42 H 0.10 -0.68 8.09 -51.93 -0.42 -1.10 16 43 H 0.09 -0.35 7.88 -51.93 -0.41 -0.76 16 44 H 0.22 -1.05 8.06 -52.49 -0.42 -1.48 16 45 H 0.22 -0.18 8.06 -52.49 -0.42 -0.60 16 46 H 0.10 -0.54 8.10 -51.93 -0.42 -0.96 16 47 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 48 H 0.13 -0.48 6.39 -52.48 -0.34 -0.81 16 49 H 0.13 -0.38 6.19 -52.48 -0.32 -0.70 16 50 H 0.13 -0.35 6.19 -52.48 -0.33 -0.68 16 51 H 0.13 -0.39 4.89 -52.49 -0.26 -0.64 16 LS Contribution 424.11 15.07 6.39 6.39 Total: 0.00 -12.09 424.11 -14.46 -26.56 By element: Atomic # 1 Polarization: -9.01 SS G_CDS: -6.37 Total: -15.38 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -8.74 Total: -6.34 kcal Atomic # 7 Polarization: -1.44 SS G_CDS: -0.32 Total: -1.76 kcal Atomic # 8 Polarization: -3.12 SS G_CDS: -0.37 Total: -3.48 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.06 Total: -5.99 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -12.09 -14.46 -26.56 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13158362.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.519 kcal (2) G-P(sol) polarization free energy of solvation -12.094 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 127.424 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.557 kcal (6) G-S(sol) free energy of system = (1) + (5) 112.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds