Wall clock time and date at job start Sun Mar 7 2021 04:40:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46872 * 2 1 4 4 C 1.50698 * 109.47099 * 119.99469 * 2 1 3 5 5 C 1.34711 * 125.66329 * 65.00198 * 4 2 1 6 6 C 1.40973 * 107.02680 * 179.74616 * 5 4 2 7 7 C 1.35937 * 106.74267 * 0.37633 * 6 5 4 8 8 C 1.47810 * 125.92765 * 179.88524 * 7 6 5 9 9 C 1.39805 * 120.00471 * 359.71844 * 8 7 6 10 10 C 1.37806 * 120.25051 * 180.02562 * 9 8 7 11 11 C 1.38779 * 120.24334 * 0.02562 * 10 9 8 12 12 O 1.35646 * 120.00365 * 179.97438 * 11 10 9 13 13 C 1.40257 * 119.99355 * 0.25238 * 11 10 9 14 14 C 1.47566 * 120.11922 * 179.74547 * 13 11 10 15 15 O 1.21588 * 120.00120 * 0.02562 * 14 13 11 16 16 N 1.34771 * 119.99615 * 179.97438 * 14 13 11 17 17 C 1.46504 * 120.00005 * 179.97438 * 16 14 13 18 18 H 1.09001 * 112.84928 * 336.20475 * 17 16 14 19 19 C 1.53786 * 113.61119 * 107.50417 * 17 16 14 20 20 C 1.53780 * 87.07928 * 89.12158 * 19 17 16 21 21 H 1.09003 * 113.61164 * 270.88437 * 20 19 17 22 22 C 1.52994 * 113.68916 * 139.99151 * 20 19 17 23 23 N 1.46502 * 109.47279 * 87.46638 * 22 20 19 24 24 C 1.34430 * 126.82899 * 124.99681 * 23 22 20 25 25 N 1.30825 * 108.08072 * 179.97438 * 24 23 22 26 26 C 1.33246 * 109.83065 * 0.02562 * 25 24 23 27 27 N 1.30714 * 108.94053 * 359.74820 * 26 25 24 28 28 C 1.53774 * 113.61858 * 205.00429 * 17 16 14 29 29 C 1.39214 * 120.00067 * 179.73525 * 8 7 6 30 30 O 1.34340 * 125.66885 * 244.98157 * 4 2 1 31 31 H 0.96697 * 114.00109 * 300.00280 * 1 2 3 32 32 H 1.08997 * 109.47692 * 239.99822 * 2 1 3 33 33 H 1.48496 * 109.99910 * 178.67983 * 3 2 1 34 34 H 1.48507 * 109.99795 * 299.99466 * 3 2 1 35 35 H 1.08001 * 126.48288 * 0.02562 * 5 4 2 36 36 H 1.07999 * 126.62609 * 180.27810 * 6 5 4 37 37 H 1.08001 * 119.87383 * 0.02562 * 9 8 7 38 38 H 1.07998 * 119.88355 * 180.02562 * 10 9 8 39 39 H 0.96700 * 114.00407 * 89.99831 * 12 11 10 40 40 H 0.97001 * 120.00246 * 0.02562 * 16 14 13 41 41 H 1.09006 * 113.61270 * 203.66587 * 19 17 16 42 42 H 1.08994 * 113.61440 * 334.57091 * 19 17 16 43 43 H 1.09008 * 109.47094 * 207.46219 * 22 20 19 44 44 H 1.09002 * 109.47629 * 327.46010 * 22 20 19 45 45 H 1.08004 * 125.95336 * 0.02562 * 24 23 22 46 46 H 1.07992 * 125.53053 * 179.97438 * 26 25 24 47 47 H 1.09002 * 113.61803 * 25.42934 * 28 17 16 48 48 H 1.08998 * 113.61733 * 156.33671 * 28 17 16 49 49 H 1.08000 * 120.12101 * 359.97438 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.7571 -2.0166 1.5094 6 6 2.3869 -2.2622 2.7465 7 6 2.9088 -1.0778 3.1621 8 6 3.6599 -0.8531 4.4152 9 6 3.8819 -1.9148 5.2972 10 6 4.5811 -1.7109 6.4671 11 6 5.0697 -0.4498 6.7787 12 8 5.7568 -0.2545 7.9318 13 6 4.8478 0.6239 5.9040 14 6 5.3612 1.9671 6.2352 15 8 5.9782 2.1445 7.2678 16 7 5.1471 2.9969 5.3926 17 6 5.6563 4.3306 5.7217 18 1 5.8098 4.4731 6.7914 19 6 6.8571 4.7608 4.8626 20 6 5.8373 5.3377 3.8665 21 1 5.5079 4.6207 3.1144 22 6 6.2580 6.6796 3.2640 23 7 7.0774 6.4446 2.0725 24 6 6.8601 6.9276 0.8369 25 7 7.8143 6.4901 0.0562 26 6 8.6554 5.7278 0.7541 27 7 8.2490 5.6740 1.9952 28 6 4.8705 5.4719 5.0548 29 6 4.1461 0.4160 4.7173 30 8 2.6276 -0.1461 2.2313 31 1 -0.3933 0.4417 0.7650 32 1 1.7925 -0.5138 -0.8899 33 1 3.5345 1.7704 0.0321 34 1 1.5615 2.4679 -1.2086 35 1 1.2375 -2.7399 0.8985 36 1 2.4425 -3.2081 3.2647 37 1 3.5040 -2.8985 5.0609 38 1 4.7495 -2.5354 7.1440 39 1 6.7110 -0.3871 7.8484 40 1 4.6552 2.8553 4.5687 41 1 7.4827 5.5183 5.3348 42 1 7.4311 3.9242 4.4645 43 1 5.3700 7.2483 2.9878 44 1 6.8360 7.2420 3.9973 45 1 6.0410 7.5663 0.5408 46 1 9.5327 5.2373 0.3591 47 1 3.8409 5.2094 4.8117 48 1 4.9531 6.4237 5.5795 49 1 3.9759 1.2376 4.0373 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13259648.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:40:30 Heat of formation + Delta-G solvation = 68.797635 kcal Electronic energy + Delta-G solvation = -36537.716906 eV Core-core repulsion = 31629.971186 eV Total energy + Delta-G solvation = -4907.745720 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.152 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -43.76523 -43.00057 -41.74592 -40.64848 -39.04199 -38.18027 -37.82482 -35.46721 -34.37871 -33.98879 -32.79482 -32.27181 -32.12960 -30.11853 -29.16112 -26.89902 -26.46744 -25.71186 -24.53028 -23.60413 -23.00811 -22.90487 -22.45067 -21.99339 -21.26463 -20.47252 -19.65986 -19.20019 -18.49748 -18.24760 -17.73788 -17.51777 -17.18285 -16.87135 -16.70725 -16.63405 -16.37959 -16.04325 -15.91160 -15.82010 -15.59350 -15.40430 -15.22092 -14.83290 -14.67989 -14.49629 -14.35353 -14.17000 -14.03596 -13.95667 -13.70703 -13.55978 -13.30246 -13.19926 -13.16755 -12.94433 -12.87264 -12.37643 -12.20205 -11.90535 -11.79376 -11.43938 -11.11587 -10.93456 -10.83605 -10.75222 -10.73819 -10.62151 -10.50904 -10.36841 -10.09115 -8.96849 -5.18716 -0.61781 -0.28303 0.67636 0.71453 1.03271 1.30467 1.35426 1.44106 1.67345 1.82592 1.88432 1.94496 2.04830 2.57095 3.03648 3.09124 3.13732 3.23797 3.25856 3.38351 3.41380 3.44077 3.52667 3.62414 3.81162 3.84100 3.91457 3.92335 3.94848 3.96876 4.09227 4.19951 4.21613 4.30978 4.38330 4.49408 4.52575 4.54924 4.55484 4.66980 4.71077 4.77297 4.81596 4.94469 4.96377 4.99752 5.05898 5.09827 5.28705 5.34820 5.38694 5.47386 5.48519 5.80978 5.92244 6.30765 6.36588 6.62294 7.14037 7.15090 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.027 4.027 3 Si 0.698 3.302 4 C -0.052 4.052 5 C -0.169 4.169 6 C -0.188 4.188 7 C 0.035 3.965 8 C -0.034 4.034 9 C -0.052 4.052 10 C -0.148 4.148 11 C 0.181 3.819 12 O -0.475 6.475 13 C -0.164 4.164 14 C 0.564 3.436 15 O -0.513 6.513 16 N -0.712 5.712 17 C 0.120 3.880 18 H 0.109 0.891 19 C -0.134 4.134 20 C -0.124 4.124 21 H 0.094 0.906 22 C 0.137 3.863 23 N -0.378 5.378 24 C 0.251 3.749 25 N -0.547 5.547 26 C 0.195 3.805 27 N -0.312 5.312 28 C -0.137 4.137 29 C -0.054 4.054 30 O -0.166 6.166 31 H 0.383 0.617 32 H 0.133 0.867 33 H -0.253 1.253 34 H -0.245 1.245 35 H 0.154 0.846 36 H 0.155 0.845 37 H 0.140 0.860 38 H 0.146 0.854 39 H 0.400 0.600 40 H 0.399 0.601 41 H 0.094 0.906 42 H 0.075 0.925 43 H 0.105 0.895 44 H 0.093 0.907 45 H 0.218 0.782 46 H 0.216 0.784 47 H 0.081 0.919 48 H 0.102 0.898 49 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.738 0.981 0.053 3.865 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.138 4.138 3 Si 0.598 3.402 4 C -0.102 4.102 5 C -0.188 4.188 6 C -0.207 4.207 7 C -0.015 4.015 8 C -0.034 4.034 9 C -0.071 4.071 10 C -0.167 4.167 11 C 0.134 3.866 12 O -0.287 6.287 13 C -0.168 4.168 14 C 0.351 3.649 15 O -0.389 6.389 16 N -0.364 5.364 17 C 0.015 3.985 18 H 0.127 0.873 19 C -0.173 4.173 20 C -0.143 4.143 21 H 0.113 0.887 22 C 0.015 3.985 23 N -0.169 5.169 24 C -0.046 4.046 25 N -0.274 5.274 26 C -0.107 4.107 27 N -0.139 5.139 28 C -0.175 4.175 29 C -0.072 4.072 30 O -0.064 6.064 31 H 0.232 0.768 32 H 0.151 0.849 33 H -0.177 1.177 34 H -0.169 1.169 35 H 0.172 0.828 36 H 0.172 0.828 37 H 0.158 0.842 38 H 0.164 0.836 39 H 0.259 0.741 40 H 0.234 0.766 41 H 0.112 0.888 42 H 0.094 0.906 43 H 0.123 0.877 44 H 0.111 0.889 45 H 0.234 0.766 46 H 0.232 0.768 47 H 0.099 0.901 48 H 0.121 0.879 49 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.805 1.533 0.374 3.219 hybrid contribution -0.005 -0.957 -0.860 1.287 sum -2.811 0.576 -0.486 2.910 Atomic orbital electron populations 1.86570 1.16105 1.81735 1.49123 1.24402 0.85242 1.11181 0.92957 0.94462 0.81422 0.77113 0.87222 1.22900 1.01061 0.93941 0.92253 1.21576 1.03627 0.95664 0.97966 1.21866 1.02786 0.98413 0.97607 1.20265 1.03077 0.87437 0.90712 1.17566 1.00238 0.94152 0.91445 1.21132 0.95310 0.98474 0.92139 1.21404 1.00826 0.96841 0.97589 1.18596 0.93034 0.90561 0.84436 1.84747 1.23965 1.92180 1.27796 1.20259 1.05501 0.94669 0.96345 1.17959 0.79673 0.83827 0.83425 1.90843 1.39647 1.84017 1.24347 1.45575 1.58124 1.08372 1.24346 1.21829 0.94703 0.81194 1.00791 0.87323 1.23417 0.96299 1.01539 0.96041 1.22919 0.98308 0.96297 0.96776 0.88727 1.21928 0.93661 0.98065 0.84821 1.50603 1.19766 1.36957 1.09615 1.26125 0.99160 0.97774 0.81548 1.70560 1.05771 1.16930 1.34161 1.26063 0.99933 0.97131 0.87613 1.78091 0.98659 1.16224 1.20941 1.23361 0.98813 0.99467 0.95885 1.21275 0.94529 0.96578 0.94867 1.83905 1.57950 1.37974 1.26527 0.76848 0.84950 1.17702 1.16920 0.82800 0.82770 0.84192 0.83589 0.74091 0.76580 0.88781 0.90581 0.87700 0.88885 0.76580 0.76810 0.90064 0.87911 0.84806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.52 12.88 -35.23 -0.45 0.06 16 2 C -0.03 0.03 2.98 36.00 0.11 0.14 16 3 Si 0.70 -1.18 32.11 -169.99 -5.46 -6.64 16 4 C -0.05 0.00 6.20 -35.56 -0.22 -0.22 16 5 C -0.17 -0.05 10.78 -39.80 -0.43 -0.48 16 6 C -0.19 0.02 10.26 -39.37 -0.40 -0.38 16 7 C 0.03 0.01 7.03 -36.49 -0.26 -0.24 16 8 C -0.03 0.01 5.87 -105.03 -0.62 -0.61 16 9 C -0.05 0.07 9.54 -39.15 -0.37 -0.30 16 10 C -0.15 0.14 9.96 -39.54 -0.39 -0.26 16 11 C 0.18 0.19 6.72 -38.62 -0.26 -0.07 16 12 O -0.48 -0.86 11.55 -40.59 -0.47 -1.32 16 13 C -0.16 -0.16 5.88 -104.89 -0.62 -0.78 16 14 C 0.56 1.22 7.76 -12.46 -0.10 1.13 16 15 O -0.51 -2.85 14.74 -16.66 -0.25 -3.10 16 16 N -0.71 0.55 5.21 -54.05 -0.28 0.27 16 17 C 0.12 -0.16 4.32 -67.12 -0.29 -0.46 16 18 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 19 C -0.13 0.17 7.43 -25.92 -0.19 -0.02 16 20 C -0.12 0.41 3.73 -89.81 -0.33 0.07 16 21 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 22 C 0.14 -0.51 6.39 -4.04 -0.03 -0.53 16 23 N -0.38 0.10 3.69 -62.63 -0.23 -0.13 16 24 C 0.25 -0.08 12.63 -90.66 -1.14 -1.23 16 25 N -0.55 -1.51 11.19 -15.83 -0.18 -1.69 16 26 C 0.20 0.43 13.03 -91.81 -1.20 -0.76 16 27 N -0.31 -0.76 12.57 29.29 0.37 -0.39 16 28 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 29 C -0.05 0.02 9.20 -38.78 -0.36 -0.33 16 30 O -0.17 -0.06 8.80 4.59 0.04 -0.02 16 31 H 0.38 -1.82 8.70 45.56 0.40 -1.42 16 32 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 33 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 34 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 35 H 0.15 -0.11 8.06 -52.49 -0.42 -0.53 16 36 H 0.15 -0.34 7.24 -52.49 -0.38 -0.72 16 37 H 0.14 -0.49 6.96 -52.49 -0.37 -0.86 16 38 H 0.15 -0.39 8.06 -52.49 -0.42 -0.82 16 39 H 0.40 -0.74 9.06 45.56 0.41 -0.32 16 40 H 0.40 -1.14 6.73 -40.82 -0.27 -1.41 16 41 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 42 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 43 H 0.10 -0.69 8.09 -51.92 -0.42 -1.11 16 44 H 0.09 -0.36 7.85 -51.93 -0.41 -0.77 16 45 H 0.22 -1.04 8.06 -52.48 -0.42 -1.46 16 46 H 0.22 -0.13 8.06 -52.49 -0.42 -0.56 16 47 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 48 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 49 H 0.13 -0.31 6.24 -52.49 -0.33 -0.64 16 LS Contribution 423.01 15.07 6.37 6.37 Total: 0.00 -13.20 423.01 -12.98 -26.18 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -5.15 Total: -14.64 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -7.29 Total: -4.96 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: -0.32 Total: -1.94 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -1.13 Total: -4.38 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.46 Total: -6.64 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -13.20 -12.98 -26.18 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13259648.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.977 kcal (2) G-P(sol) polarization free energy of solvation -13.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.980 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.179 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.798 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds