Wall clock time and date at job start Sun Mar 7 2021 04:40:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86306 * 109.46765 * 2 1 4 4 C 1.50699 * 109.47722 * 240.00131 * 2 1 3 5 5 C 1.34184 * 126.54397 * 104.95329 * 4 2 1 6 6 N 1.36859 * 109.96992 * 180.02562 * 5 4 2 7 7 C 1.37399 * 109.97952 * 359.97438 * 6 5 4 8 8 C 1.39336 * 133.25040 * 179.97438 * 7 6 5 9 9 C 1.36347 * 120.23892 * 180.02562 * 8 7 6 10 10 C 1.40175 * 120.66587 * 359.97438 * 9 8 7 11 11 C 1.47655 * 119.97307 * 179.97438 * 10 9 8 12 12 O 1.21572 * 120.00035 * 179.97438 * 11 10 9 13 13 N 1.34782 * 119.99611 * 0.02562 * 11 10 9 14 14 C 1.46505 * 119.99564 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.84875 * 336.19731 * 14 13 11 16 16 C 1.53776 * 113.68717 * 107.46492 * 14 13 11 17 17 C 1.53775 * 87.08393 * 89.12583 * 16 14 13 18 18 H 1.08996 * 113.69476 * 270.87629 * 17 16 14 19 19 C 1.53000 * 113.61825 * 139.97637 * 17 16 14 20 20 N 1.46499 * 109.46840 * 87.50296 * 19 17 16 21 21 C 1.34434 * 126.82191 * 124.99999 * 20 19 17 22 22 N 1.30831 * 108.08020 * 179.97438 * 21 20 19 23 23 C 1.33245 * 109.82847 * 0.02562 * 22 21 20 24 24 N 1.30718 * 108.94531 * 359.75451 * 23 22 21 25 25 C 1.53774 * 113.61253 * 204.99703 * 14 13 11 26 26 C 1.39184 * 120.05217 * 0.25468 * 10 9 8 27 27 C 1.39231 * 119.39606 * 359.51778 * 26 10 9 28 28 H 0.96691 * 114.00462 * 299.99992 * 1 2 3 29 29 H 1.09001 * 109.47352 * 119.99462 * 2 1 3 30 30 H 1.48496 * 109.99972 * 299.99953 * 3 2 1 31 31 H 1.48503 * 109.99774 * 61.31822 * 3 2 1 32 32 H 1.08010 * 125.01389 * 0.02562 * 5 4 2 33 33 H 0.97008 * 125.00986 * 180.02562 * 6 5 4 34 34 H 1.07996 * 119.87614 * 0.02562 * 8 7 6 35 35 H 1.07991 * 119.66674 * 179.97438 * 9 8 7 36 36 H 0.97000 * 120.00182 * 359.97438 * 13 11 10 37 37 H 1.09005 * 113.62055 * 334.57437 * 16 14 13 38 38 H 1.08999 * 113.61331 * 203.67817 * 16 14 13 39 39 H 1.09002 * 109.47398 * 207.50622 * 19 17 16 40 40 H 1.09001 * 109.47194 * 327.50803 * 19 17 16 41 41 H 1.08000 * 125.96215 * 0.02562 * 21 20 19 42 42 H 1.07998 * 125.53102 * 179.97438 * 23 22 21 43 43 H 1.09006 * 113.61277 * 156.25191 * 25 14 13 44 44 H 1.09001 * 113.69334 * 25.36603 * 25 14 13 45 45 H 1.08001 * 120.29971 * 179.72110 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9315 -0.7103 -1.2304 5 6 2.4602 -0.1386 -2.3232 6 7 2.8020 -1.1003 -3.2349 7 6 2.4958 -2.3454 -2.7412 8 6 2.6345 -3.6350 -3.2502 9 6 2.2316 -4.7104 -2.5153 10 6 1.6741 -4.5370 -1.2409 11 6 1.2423 -5.7124 -0.4584 12 8 0.7592 -5.5626 0.6471 13 7 1.3849 -6.9514 -0.9694 14 6 0.9570 -8.1177 -0.1928 15 1 0.9356 -7.9270 0.8802 16 6 -0.3245 -8.7791 -0.7267 17 6 0.5853 -9.6402 -1.6185 18 1 0.8018 -9.1904 -2.5874 19 6 0.1343 -11.0981 -1.7278 20 7 -0.8283 -11.2305 -2.8243 21 6 -0.7465 -12.0698 -3.8712 22 7 -1.7995 -11.8827 -4.6248 23 6 -2.5726 -10.9360 -4.0942 24 7 -2.0222 -10.5093 -2.9880 25 6 1.6909 -9.4142 -0.5737 26 6 1.5218 -3.2574 -0.7149 27 6 1.9369 -2.1578 -1.4614 28 1 -0.3933 0.4416 0.7649 29 1 1.7924 -0.5137 0.8900 30 1 1.5614 2.4679 -1.2085 31 1 1.5877 2.4586 1.2243 32 1 2.5958 0.9238 -2.4626 33 1 3.2023 -0.9283 -4.1017 34 1 3.0628 -3.7832 -4.2305 35 1 2.3431 -5.7058 -2.9190 36 1 1.7707 -7.0709 -1.8513 37 1 -0.9667 -8.0987 -1.2860 38 1 -0.8665 -9.3515 0.0260 39 1 0.9988 -11.7322 -1.9246 40 1 -0.3355 -11.4042 -0.7931 41 1 0.0491 -12.7760 -4.0573 42 1 -3.5046 -10.5813 -4.5088 43 1 1.6999 -10.1604 0.2209 44 1 2.6761 -9.2481 -1.0094 45 1 1.0886 -3.1189 0.2646 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13287722.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:40:35 Heat of formation + Delta-G solvation = 123.255685 kcal Electronic energy + Delta-G solvation = -29826.989282 eV Core-core repulsion = 25621.769654 eV Total energy + Delta-G solvation = -4205.219628 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.95808 -42.46408 -41.27048 -39.59334 -37.88738 -37.41293 -35.42041 -33.87465 -33.35069 -32.09388 -30.88959 -30.52408 -29.02205 -26.83080 -26.44291 -25.35951 -24.09693 -23.47699 -22.86245 -22.40154 -21.72335 -20.58328 -20.36791 -19.09349 -18.55860 -18.41859 -18.17907 -17.38711 -17.07134 -16.82257 -16.27572 -15.98208 -15.85010 -15.79293 -15.44248 -15.25069 -15.21274 -15.00656 -14.78389 -14.71944 -14.65802 -14.21355 -14.04831 -13.80440 -13.59011 -13.39540 -13.16843 -12.89101 -12.74009 -12.54616 -12.30786 -12.12085 -11.78930 -11.74100 -11.37435 -10.89451 -10.84420 -10.75821 -10.69699 -10.57831 -10.35262 -10.03410 -9.30786 -8.81398 -4.97779 -0.04022 0.20082 0.71806 1.28429 1.34669 1.47272 1.57422 1.92792 1.99130 1.99932 2.08766 2.12206 2.95636 3.14484 3.32619 3.42260 3.49210 3.50474 3.58905 3.67635 3.71830 3.82996 3.90572 3.93857 3.98993 4.01353 4.11497 4.25367 4.27308 4.38480 4.42726 4.50258 4.55010 4.58509 4.61100 4.73990 4.80927 4.88642 5.02388 5.05974 5.08014 5.27000 5.32920 5.37933 5.50397 5.52527 5.60989 5.61280 5.85064 5.99157 6.38038 6.53530 6.55441 7.18059 7.31666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.043 4.043 3 Si 0.683 3.317 4 C -0.145 4.145 5 C 0.064 3.936 6 N -0.584 5.584 7 C 0.120 3.880 8 C -0.133 4.133 9 C -0.067 4.067 10 C -0.170 4.170 11 C 0.569 3.431 12 O -0.536 6.536 13 N -0.712 5.712 14 C 0.120 3.880 15 H 0.107 0.893 16 C -0.135 4.135 17 C -0.123 4.123 18 H 0.094 0.906 19 C 0.137 3.863 20 N -0.378 5.378 21 C 0.250 3.750 22 N -0.547 5.547 23 C 0.195 3.805 24 N -0.311 5.311 25 C -0.137 4.137 26 C 0.009 3.991 27 C -0.102 4.102 28 H 0.378 0.622 29 H 0.074 0.926 30 H -0.255 1.255 31 H -0.259 1.259 32 H 0.177 0.823 33 H 0.422 0.578 34 H 0.128 0.872 35 H 0.126 0.874 36 H 0.399 0.601 37 H 0.076 0.924 38 H 0.093 0.907 39 H 0.104 0.896 40 H 0.093 0.907 41 H 0.218 0.782 42 H 0.216 0.784 43 H 0.101 0.899 44 H 0.079 0.921 45 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.690 -0.082 -1.751 7.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.153 4.153 3 Si 0.584 3.416 4 C -0.152 4.152 5 C -0.062 4.062 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.153 4.153 9 C -0.087 4.087 10 C -0.174 4.174 11 C 0.358 3.642 12 O -0.413 6.413 13 N -0.364 5.364 14 C 0.015 3.985 15 H 0.125 0.875 16 C -0.174 4.174 17 C -0.142 4.142 18 H 0.113 0.887 19 C 0.015 3.985 20 N -0.169 5.169 21 C -0.047 4.047 22 N -0.274 5.274 23 C -0.108 4.108 24 N -0.138 5.138 25 C -0.175 4.175 26 C -0.010 4.010 27 C -0.107 4.107 28 H 0.226 0.774 29 H 0.092 0.908 30 H -0.179 1.179 31 H -0.184 1.184 32 H 0.194 0.806 33 H 0.260 0.740 34 H 0.146 0.854 35 H 0.144 0.856 36 H 0.235 0.765 37 H 0.095 0.905 38 H 0.111 0.889 39 H 0.122 0.878 40 H 0.111 0.889 41 H 0.234 0.766 42 H 0.232 0.768 43 H 0.120 0.880 44 H 0.098 0.902 45 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 6.945 1.000 -1.383 7.152 hybrid contribution -0.571 -0.326 -0.483 0.816 sum 6.374 0.675 -1.866 6.676 Atomic orbital electron populations 1.86635 1.18068 1.80023 1.49530 1.24079 0.84084 1.10015 0.97100 0.95275 0.91399 0.74320 0.80639 1.19518 1.07865 0.91169 0.96603 1.21680 1.01149 0.94373 0.89039 1.41709 1.54779 1.04112 1.18056 1.18415 0.99911 0.86524 0.94049 1.19655 1.05758 0.88828 1.01088 1.20549 0.96880 0.98260 0.93001 1.19501 1.08402 0.93176 0.96325 1.18168 0.77625 0.82785 0.85655 1.90791 1.44330 1.85936 1.20234 1.45538 1.64698 1.05268 1.20873 1.21804 0.95035 0.84277 0.97414 0.87456 1.23418 0.96520 0.98574 0.98873 1.22904 0.97853 0.94072 0.99349 0.88734 1.21930 0.89890 0.98291 0.88370 1.50605 1.17390 1.28729 1.20199 1.26120 0.98420 0.94988 0.85129 1.70561 1.05135 1.20318 1.31404 1.26072 1.00553 0.93319 0.90826 1.78109 0.95980 1.19135 1.20620 1.23356 0.97906 0.97425 0.98858 1.20657 0.92340 0.89174 0.98831 1.18920 1.04456 0.92925 0.94382 0.77448 0.90774 1.17926 1.18403 0.80630 0.74035 0.85414 0.85588 0.76549 0.90510 0.88871 0.87776 0.88920 0.76609 0.76784 0.88038 0.90203 0.84476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.26 12.86 -35.23 -0.45 -1.72 16 2 C -0.04 -0.03 3.05 36.01 0.11 0.08 16 3 Si 0.68 -0.86 30.80 -169.99 -5.24 -6.09 16 4 C -0.14 -0.26 5.61 -102.69 -0.58 -0.83 16 5 C 0.06 -0.03 10.43 -16.74 -0.17 -0.20 16 6 N -0.58 0.65 6.05 -10.61 -0.06 0.58 16 7 C 0.12 0.14 7.27 -83.95 -0.61 -0.47 16 8 C -0.13 0.03 10.00 -39.85 -0.40 -0.37 16 9 C -0.07 0.00 9.46 -39.54 -0.37 -0.37 16 10 C -0.17 -0.44 5.87 -104.97 -0.62 -1.06 16 11 C 0.57 2.00 7.76 -12.41 -0.10 1.90 16 12 O -0.54 -3.90 15.93 5.30 0.08 -3.81 16 13 N -0.71 -0.08 5.22 -54.02 -0.28 -0.36 16 14 C 0.12 -0.06 4.32 -67.12 -0.29 -0.35 16 15 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 16 C -0.14 0.05 7.43 -25.92 -0.19 -0.14 16 17 C -0.12 0.33 3.74 -89.81 -0.34 0.00 16 18 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 19 C 0.14 -0.44 6.39 -4.04 -0.03 -0.46 16 20 N -0.38 -0.04 3.69 -62.63 -0.23 -0.27 16 21 C 0.25 -0.02 12.63 -90.65 -1.14 -1.17 16 22 N -0.55 -1.61 11.19 -15.83 -0.18 -1.79 16 23 C 0.20 0.48 13.03 -91.81 -1.20 -0.71 16 24 N -0.31 -0.89 12.57 29.29 0.37 -0.52 16 25 C -0.14 0.50 7.39 -25.92 -0.19 0.31 16 26 C 0.01 0.04 9.64 -38.86 -0.37 -0.34 16 27 C -0.10 -0.31 6.34 -105.16 -0.67 -0.98 16 28 H 0.38 -0.63 8.74 45.56 0.40 -0.23 16 29 H 0.07 -0.02 7.96 -51.93 -0.41 -0.43 16 30 H -0.25 -0.27 7.04 56.52 0.40 0.13 16 31 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 32 H 0.18 -0.56 6.30 -52.48 -0.33 -0.89 16 33 H 0.42 -1.83 8.96 -40.82 -0.37 -2.19 16 34 H 0.13 -0.35 8.06 -52.49 -0.42 -0.77 16 35 H 0.13 -0.37 6.36 -52.49 -0.33 -0.71 16 36 H 0.40 -0.93 6.71 -40.82 -0.27 -1.21 16 37 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 38 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 39 H 0.10 -0.63 8.09 -51.93 -0.42 -1.05 16 40 H 0.09 -0.31 7.84 -51.93 -0.41 -0.72 16 41 H 0.22 -0.99 8.06 -52.49 -0.42 -1.41 16 42 H 0.22 -0.08 8.06 -52.49 -0.42 -0.51 16 43 H 0.10 -0.48 8.10 -51.93 -0.42 -0.91 16 44 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 45 H 0.14 0.62 7.64 -52.49 -0.40 0.22 16 LS Contribution 383.49 15.07 5.78 5.78 Total: 0.00 -13.40 383.49 -12.87 -26.27 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: -5.50 Total: -12.89 kcal Atomic # 6 Polarization: 1.97 SS G_CDS: -7.15 Total: -5.18 kcal Atomic # 7 Polarization: -1.97 SS G_CDS: -0.39 Total: -2.35 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -0.37 Total: -5.53 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.24 Total: -6.09 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -13.40 -12.87 -26.27 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13287722.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.522 kcal (2) G-P(sol) polarization free energy of solvation -13.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 136.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.869 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.266 kcal (6) G-S(sol) free energy of system = (1) + (5) 123.256 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds