Wall clock time and date at job start Sun Mar 7 2021 04:40:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38979 * 119.95826 * 2 1 4 4 O 1.35712 * 119.91005 * 0.28183 * 3 2 1 5 5 C 1.39015 * 120.17537 * 179.97438 * 3 2 1 6 6 C 1.50701 * 119.95420 * 180.02562 * 5 3 2 7 7 O 1.42901 * 109.47011 * 75.00132 * 6 5 3 8 8 Si 1.86292 * 109.47259 * 195.00451 * 6 5 3 9 9 C 1.37680 * 120.08818 * 359.97438 * 5 3 2 10 10 C 1.39745 * 119.91499 * 0.02562 * 9 5 3 11 11 C 1.47599 * 120.09073 * 179.97438 * 10 9 5 12 12 O 1.21586 * 120.00053 * 0.02562 * 11 10 9 13 13 N 1.34783 * 120.00207 * 179.97438 * 11 10 9 14 14 C 1.46502 * 120.00035 * 180.02562 * 13 11 10 15 15 H 1.09005 * 112.84994 * 23.80430 * 14 13 11 16 16 C 1.53770 * 113.61404 * 155.00348 * 14 13 11 17 17 C 1.53785 * 87.08350 * 89.11652 * 16 14 13 18 18 H 1.08996 * 113.61262 * 270.80604 * 17 16 14 19 19 C 1.52998 * 113.61621 * 139.97847 * 17 16 14 20 20 N 1.46496 * 109.47112 * 175.00327 * 19 17 16 21 21 C 1.34430 * 126.82628 * 125.00000 * 20 19 17 22 22 N 1.30826 * 108.08455 * 179.97438 * 21 20 19 23 23 C 1.33249 * 109.82606 * 0.02562 * 22 21 20 24 24 N 1.30714 * 108.94437 * 359.75128 * 23 22 21 25 25 C 1.53777 * 113.61468 * 252.50501 * 14 13 11 26 26 C 1.37722 * 119.95245 * 180.02562 * 2 1 3 27 27 H 1.08997 * 109.46722 * 89.99272 * 1 2 3 28 28 H 1.08991 * 109.47090 * 209.99990 * 1 2 3 29 29 H 1.09003 * 109.46511 * 329.99946 * 1 2 3 30 30 H 0.96703 * 113.99179 * 269.72281 * 4 3 2 31 31 H 1.09000 * 109.47029 * 315.00244 * 6 5 3 32 32 H 0.96703 * 113.99876 * 299.99801 * 7 6 5 33 33 H 1.48505 * 109.99797 * 298.68205 * 8 6 5 34 34 H 1.48496 * 110.00127 * 59.99729 * 8 6 5 35 35 H 1.08001 * 120.04163 * 180.02562 * 9 5 3 36 36 H 0.96993 * 119.99608 * 0.02562 * 13 11 10 37 37 H 1.08995 * 113.61900 * 203.66570 * 16 14 13 38 38 H 1.09001 * 113.61630 * 334.56910 * 16 14 13 39 39 H 1.08998 * 109.47620 * 295.00310 * 19 17 16 40 40 H 1.09004 * 109.47134 * 55.00139 * 19 17 16 41 41 H 1.08001 * 125.95662 * 0.02562 * 21 20 19 42 42 H 1.07994 * 125.52938 * 179.97438 * 23 22 21 43 43 H 1.08998 * 113.61956 * 25.43011 * 25 14 13 44 44 H 1.09002 * 113.61800 * 156.33468 * 25 14 13 45 45 H 1.07996 * 120.04724 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2011 1.2041 0.0000 4 8 1.5198 2.3778 0.0058 5 6 3.5912 1.2094 0.0005 6 6 4.3387 2.5179 0.0011 7 8 4.2717 3.1042 1.3026 8 14 6.1200 2.2158 -0.4530 9 6 4.2860 0.0207 0.0016 10 6 3.5919 -1.1922 0.0016 11 6 4.3328 -2.4688 0.0022 12 8 5.5486 -2.4660 0.0031 13 7 3.6615 -3.6376 0.0027 14 6 4.3970 -4.9046 0.0038 15 1 5.4041 -4.8091 0.4096 16 6 3.6015 -6.0780 0.5997 17 6 3.0630 -6.3305 -0.8185 18 1 2.1504 -5.7787 -1.0436 19 6 2.9657 -7.8134 -1.1822 20 7 2.3348 -7.9535 -2.4969 21 6 2.8321 -8.6018 -3.5643 22 7 1.9685 -8.4975 -4.5415 23 6 0.9123 -7.7924 -4.1378 24 7 1.0878 -7.4413 -2.8910 25 6 4.3404 -5.6509 -1.3395 26 6 2.1947 -1.1933 -0.0005 27 1 -0.3633 0.0001 -1.0277 28 1 -0.3633 -0.8899 0.5138 29 1 -0.3632 0.8900 0.5139 30 1 1.3224 2.7222 -0.8760 31 1 3.8882 3.1940 -0.7255 32 1 3.3720 3.2894 1.6047 33 1 6.7544 1.3207 0.5478 34 1 6.2033 1.6062 -1.8045 35 1 5.3660 0.0257 0.0024 36 1 2.6916 -3.6397 0.0023 37 1 4.2299 -6.8842 0.9780 38 1 2.8341 -5.7695 1.3096 39 1 3.9654 -8.2469 -1.2109 40 1 2.3661 -8.3324 -0.4342 41 1 3.7791 -9.1192 -3.6075 42 1 0.0495 -7.5532 -4.7416 43 1 4.1694 -4.9977 -2.1951 44 1 5.1709 -6.3404 -1.4914 45 1 1.6547 -2.1285 -0.0014 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13287732.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:40:47 Heat of formation + Delta-G solvation = 38.117640 kcal Electronic energy + Delta-G solvation = -29623.966323 eV Core-core repulsion = 25418.250832 eV Total energy + Delta-G solvation = -4205.715491 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -43.03590 -41.94703 -41.11540 -39.62353 -37.77749 -37.60196 -35.58381 -34.25649 -33.97705 -32.17124 -31.80899 -29.23052 -28.22424 -27.01711 -26.90543 -25.49993 -24.22866 -22.99971 -22.54016 -22.25990 -21.71683 -20.44465 -19.70600 -18.98697 -18.40967 -18.01706 -17.79989 -17.15517 -16.93318 -16.77683 -16.25467 -16.04702 -16.00741 -15.72819 -15.37061 -15.28108 -15.17950 -15.07404 -14.83357 -14.52137 -14.07372 -13.96622 -13.76869 -13.73558 -13.50356 -13.41636 -13.08758 -13.01899 -12.83985 -12.37716 -12.32097 -12.09610 -11.92305 -11.66556 -11.26811 -11.14009 -11.00372 -10.95773 -10.76572 -10.61921 -10.28283 -10.08675 -9.81165 -4.81810 -0.52858 -0.04718 0.64196 1.26513 1.35226 1.52615 1.69111 1.85109 2.02040 2.03235 2.45892 2.85220 3.11058 3.19523 3.23694 3.29838 3.37043 3.40437 3.48260 3.55772 3.72617 3.79754 3.88669 3.90225 3.97386 4.00492 4.16860 4.19386 4.27498 4.32395 4.41056 4.41477 4.42900 4.49673 4.51212 4.60925 4.74301 4.77430 4.86992 4.90149 4.96416 4.98944 5.12260 5.24368 5.33281 5.40899 5.44735 5.78108 6.26392 6.33235 6.56113 7.02034 7.10734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.111 4.111 3 C 0.146 3.854 4 O -0.490 6.490 5 C -0.141 4.141 6 C -0.073 4.073 7 O -0.532 6.532 8 Si 0.741 3.259 9 C -0.051 4.051 10 C -0.136 4.136 11 C 0.564 3.436 12 O -0.529 6.529 13 N -0.709 5.709 14 C 0.122 3.878 15 H 0.110 0.890 16 C -0.136 4.136 17 C -0.124 4.124 18 H 0.104 0.896 19 C 0.138 3.862 20 N -0.377 5.377 21 C 0.254 3.746 22 N -0.547 5.547 23 C 0.199 3.801 24 N -0.320 5.320 25 C -0.147 4.147 26 C -0.068 4.068 27 H 0.074 0.926 28 H 0.072 0.928 29 H 0.079 0.921 30 H 0.397 0.603 31 H 0.074 0.926 32 H 0.369 0.631 33 H -0.247 1.247 34 H -0.247 1.247 35 H 0.141 0.859 36 H 0.401 0.599 37 H 0.103 0.897 38 H 0.081 0.919 39 H 0.105 0.895 40 H 0.093 0.907 41 H 0.218 0.782 42 H 0.217 0.783 43 H 0.072 0.928 44 H 0.096 0.904 45 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.364 -0.085 0.042 2.366 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.111 4.111 3 C 0.100 3.900 4 O -0.301 6.301 5 C -0.142 4.142 6 C -0.182 4.182 7 O -0.338 6.338 8 Si 0.639 3.361 9 C -0.070 4.070 10 C -0.139 4.139 11 C 0.352 3.648 12 O -0.406 6.406 13 N -0.361 5.361 14 C 0.016 3.984 15 H 0.128 0.872 16 C -0.175 4.175 17 C -0.144 4.144 18 H 0.123 0.877 19 C 0.016 3.984 20 N -0.168 5.168 21 C -0.043 4.043 22 N -0.274 5.274 23 C -0.104 4.104 24 N -0.148 5.148 25 C -0.186 4.186 26 C -0.087 4.087 27 H 0.093 0.907 28 H 0.091 0.909 29 H 0.097 0.903 30 H 0.255 0.745 31 H 0.092 0.908 32 H 0.218 0.782 33 H -0.172 1.172 34 H -0.172 1.172 35 H 0.158 0.842 36 H 0.237 0.763 37 H 0.122 0.878 38 H 0.100 0.900 39 H 0.123 0.877 40 H 0.111 0.889 41 H 0.234 0.766 42 H 0.233 0.767 43 H 0.091 0.909 44 H 0.114 0.886 45 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.662 -0.513 0.567 1.012 hybrid contribution -2.107 -0.693 -0.275 2.235 sum -2.769 -1.206 0.292 3.034 Atomic orbital electron populations 1.20750 0.89467 1.03973 1.02938 1.20198 0.97393 0.91962 1.01581 1.18301 0.88623 0.85396 0.97667 1.84714 1.75755 1.35635 1.34008 1.20682 0.93539 0.96429 1.03582 1.25170 1.13225 0.90915 0.88877 1.86737 1.32990 1.82537 1.31510 0.93222 0.76577 0.86809 0.79502 1.21007 1.00379 0.90453 0.95144 1.19816 0.93567 0.93315 1.07172 1.18133 0.87227 0.83534 0.75908 1.90819 1.13309 1.87434 1.49015 1.45548 1.10121 1.04899 1.75487 1.21800 0.97395 0.82255 0.96937 0.87217 1.23352 1.00207 0.98113 0.95787 1.22986 0.99674 0.94585 0.97113 0.87736 1.21919 0.98132 0.97799 0.80533 1.50561 1.14176 1.39838 1.12239 1.26114 1.00008 0.95346 0.82830 1.70571 1.03650 1.22754 1.30405 1.26047 0.98265 0.95158 0.90950 1.78004 0.98286 1.22970 1.15496 1.23548 0.97358 0.99607 0.98074 1.21101 0.92440 0.97955 0.97188 0.90715 0.90939 0.90256 0.74505 0.90785 0.78248 1.17202 1.17199 0.84201 0.76292 0.87849 0.90046 0.87692 0.88923 0.76580 0.76712 0.90885 0.88602 0.84935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.26 9.79 36.01 0.35 0.61 16 2 C -0.11 0.03 5.89 -104.53 -0.62 -0.59 16 3 C 0.15 0.05 6.62 -39.02 -0.26 -0.20 16 4 O -0.49 0.78 11.40 -18.84 -0.21 0.57 16 5 C -0.14 -0.26 5.27 -104.54 -0.55 -0.82 16 6 C -0.07 -0.06 2.33 36.01 0.08 0.02 16 7 O -0.53 -1.05 12.65 -35.23 -0.45 -1.49 16 8 Si 0.74 0.74 30.40 -169.99 -5.17 -4.43 16 9 C -0.05 -0.18 8.20 -39.22 -0.32 -0.50 16 10 C -0.14 -0.31 5.87 -104.96 -0.62 -0.93 16 11 C 0.56 1.78 7.76 -12.44 -0.10 1.68 16 12 O -0.53 -3.66 15.94 5.29 0.08 -3.58 16 13 N -0.71 0.25 5.21 -54.04 -0.28 -0.03 16 14 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 15 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 16 C -0.14 0.53 7.39 -25.92 -0.19 0.34 16 17 C -0.12 0.39 3.76 -89.80 -0.34 0.05 16 18 H 0.10 -0.16 8.01 -51.93 -0.42 -0.58 16 19 C 0.14 -0.49 6.39 -4.04 -0.03 -0.51 16 20 N -0.38 0.09 3.69 -62.63 -0.23 -0.14 16 21 C 0.25 -0.05 12.63 -90.66 -1.14 -1.20 16 22 N -0.55 -1.48 11.19 -15.83 -0.18 -1.66 16 23 C 0.20 0.38 13.03 -91.81 -1.20 -0.82 16 24 N -0.32 -0.70 12.46 29.29 0.36 -0.33 16 25 C -0.15 0.29 7.43 -25.92 -0.19 0.10 16 26 C -0.07 0.02 9.18 -39.22 -0.36 -0.34 16 27 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 28 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 29 H 0.08 -0.15 7.52 -51.93 -0.39 -0.54 16 30 H 0.40 -2.24 9.06 45.56 0.41 -1.83 16 31 H 0.07 -0.10 7.83 -51.93 -0.41 -0.51 16 32 H 0.37 -0.01 8.58 45.56 0.39 0.38 16 33 H -0.25 -1.07 6.81 56.52 0.38 -0.69 16 34 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 35 H 0.14 0.68 4.51 -52.49 -0.24 0.44 16 36 H 0.40 -1.07 6.72 -40.82 -0.27 -1.34 16 37 H 0.10 -0.54 8.10 -51.93 -0.42 -0.97 16 38 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 39 H 0.10 -0.64 7.79 -51.93 -0.40 -1.05 16 40 H 0.09 -0.36 8.14 -51.93 -0.42 -0.79 16 41 H 0.22 -0.97 8.06 -52.49 -0.42 -1.39 16 42 H 0.22 -0.25 8.06 -52.49 -0.42 -0.67 16 43 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 44 H 0.10 -0.31 7.90 -51.93 -0.41 -0.72 16 45 H 0.13 -0.41 6.39 -52.49 -0.34 -0.74 16 LS Contribution 379.33 15.07 5.72 5.72 Total: 0.00 -11.75 379.33 -11.16 -22.91 By element: Atomic # 1 Polarization: -8.93 SS G_CDS: -5.05 Total: -13.98 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -5.76 Total: -3.56 kcal Atomic # 7 Polarization: -1.83 SS G_CDS: -0.33 Total: -2.16 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -0.58 Total: -4.50 kcal Atomic # 14 Polarization: 0.74 SS G_CDS: -5.17 Total: -4.43 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -11.75 -11.16 -22.91 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13287732.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.027 kcal (2) G-P(sol) polarization free energy of solvation -11.746 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.909 kcal (6) G-S(sol) free energy of system = (1) + (5) 38.118 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds