Wall clock time and date at job start Sun Mar 7 2021 04:41:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.37786 * 119.84924 * 2 1 4 4 C 1.39705 * 119.90589 * 179.97438 * 3 2 1 5 5 C 1.47550 * 120.18684 * 180.02562 * 4 3 2 6 6 O 1.21590 * 119.99842 * 179.97438 * 5 4 3 7 7 N 1.34774 * 119.99902 * 0.02562 * 5 4 3 8 8 C 1.46501 * 119.99541 * 179.97438 * 7 5 4 9 9 H 1.08997 * 112.85042 * 336.19334 * 8 7 5 10 10 C 1.53785 * 113.61415 * 107.49979 * 8 7 5 11 11 C 1.53785 * 87.07777 * 89.11300 * 10 8 7 12 12 H 1.08995 * 113.69425 * 270.86851 * 11 10 8 13 13 C 1.53005 * 113.61236 * 139.98063 * 11 10 8 14 14 N 1.46501 * 109.47040 * 87.50015 * 13 11 10 15 15 C 1.34426 * 126.82101 * 124.70998 * 14 13 11 16 16 N 1.30834 * 108.08209 * 179.89831 * 15 14 13 17 17 C 1.33247 * 109.82153 * 0.37899 * 16 15 14 18 18 N 1.30714 * 108.94968 * 359.76685 * 17 16 15 19 19 C 1.53775 * 87.08111 * 25.43433 * 11 10 8 20 20 C 1.40131 * 119.62247 * 359.97438 * 4 3 2 21 21 O 1.35656 * 120.15338 * 180.02562 * 20 4 3 22 22 C 1.38714 * 119.69743 * 0.02562 * 20 4 3 23 23 C 1.50696 * 119.95799 * 179.97438 * 22 20 4 24 24 O 1.42898 * 109.47204 * 74.99606 * 23 22 20 25 25 Si 1.86300 * 109.47062 * 194.99706 * 23 22 20 26 26 C 1.38056 * 120.08113 * 359.97438 * 22 20 4 27 27 H 1.08997 * 109.46991 * 270.01543 * 1 2 3 28 28 H 1.08993 * 109.47448 * 30.02326 * 1 2 3 29 29 H 1.09006 * 109.46775 * 150.02095 * 1 2 3 30 30 H 1.07996 * 120.04811 * 359.96159 * 3 2 1 31 31 H 0.96998 * 120.00121 * 359.97438 * 7 5 4 32 32 H 1.08998 * 113.61429 * 203.66154 * 10 8 7 33 33 H 1.09003 * 113.61613 * 334.57137 * 10 8 7 34 34 H 1.08994 * 109.47065 * 207.50587 * 13 11 10 35 35 H 1.09004 * 109.47121 * 327.50432 * 13 11 10 36 36 H 1.08001 * 125.96253 * 0.03728 * 15 14 13 37 37 H 1.08001 * 125.52146 * 179.79875 * 17 16 15 38 38 H 1.09001 * 113.61510 * 220.01493 * 19 11 10 39 39 H 1.09002 * 113.61823 * 89.11389 * 19 11 10 40 40 H 0.96692 * 114.00274 * 89.99959 * 21 20 4 41 41 H 1.09004 * 109.46969 * 314.99707 * 23 22 20 42 42 H 0.96688 * 114.00406 * 60.00236 * 24 23 22 43 43 H 1.48499 * 109.99723 * 58.67959 * 25 23 22 44 44 H 1.48501 * 109.99858 * 179.97438 * 25 23 22 45 45 H 1.08002 * 119.79727 * 180.27593 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1951 0.0000 4 6 3.5898 1.1965 0.0005 5 6 4.3305 2.4726 0.0011 6 8 5.5464 2.4698 0.0021 7 7 3.6592 3.6413 0.0016 8 6 4.3947 4.9083 0.0028 9 1 5.4018 4.8128 0.4085 10 6 4.3380 5.6547 -1.3406 11 6 3.0607 6.3342 -0.8194 12 1 2.1480 5.7825 -1.0446 13 6 2.9634 7.8172 -1.1831 14 7 2.3324 7.9573 -2.4978 15 6 1.2426 8.6860 -2.7949 16 7 1.0004 8.5516 -4.0736 17 6 1.9053 7.7418 -4.6222 18 7 2.7423 7.3519 -3.6970 19 6 3.5992 6.0818 0.5986 20 6 4.2837 -0.0210 0.0016 21 8 5.6402 -0.0323 0.0027 22 6 3.5771 -1.2147 0.0016 23 6 4.3173 -2.5273 0.0022 24 8 4.8545 -2.7707 1.3038 25 14 3.1446 -3.9017 -0.4525 26 6 2.1966 -1.2016 0.0011 27 1 -0.3633 0.0003 1.0276 28 1 -0.3634 0.8897 -0.5141 29 1 -0.3633 -0.8902 -0.5135 30 1 1.6511 2.1294 -0.0006 31 1 2.6893 3.6435 0.0013 32 1 5.1685 6.3441 -1.4924 33 1 4.1670 5.0014 -2.1962 34 1 2.3639 8.3361 -0.4352 35 1 3.9631 8.2506 -1.2119 36 1 0.6685 9.2807 -2.0998 37 1 1.9415 7.4546 -5.6627 38 1 2.8319 5.7732 1.3086 39 1 4.2278 6.8879 0.9770 40 1 6.0328 -0.0351 0.8863 41 1 5.1290 -2.4871 -0.7242 42 1 4.1874 -2.8191 2.0019 43 1 2.5548 -3.6441 -1.7907 44 1 3.8626 -5.2016 -0.4561 45 1 1.6510 -2.1337 0.0056 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13422088.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:13 Heat of formation + Delta-G solvation = 42.478560 kcal Electronic energy + Delta-G solvation = -29758.697900 eV Core-core repulsion = 25553.171512 eV Total energy + Delta-G solvation = -4205.526387 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.99815 -41.86482 -40.86857 -39.23617 -38.02797 -37.61133 -35.45629 -34.13794 -33.15243 -32.54477 -32.12960 -29.19801 -27.71262 -26.90151 -26.82649 -25.63079 -24.24154 -22.90143 -22.48142 -22.10166 -21.66651 -20.46027 -19.55362 -18.57426 -18.26707 -17.90506 -17.40697 -16.97751 -16.87706 -16.69711 -16.14858 -16.09164 -15.89283 -15.70514 -15.49992 -15.28407 -15.01050 -14.83337 -14.69592 -14.64302 -14.22486 -14.15018 -13.79916 -13.64798 -13.38862 -13.21284 -13.11110 -12.94679 -12.69722 -12.37801 -12.15769 -12.07423 -11.83100 -11.70504 -11.44036 -10.93039 -10.88217 -10.73556 -10.62225 -10.44330 -10.24605 -10.06000 -9.57311 -5.11775 -0.38740 -0.00355 0.67941 1.20626 1.30557 1.59089 1.72273 1.91553 1.99786 2.05181 2.52710 3.08477 3.16240 3.25282 3.34512 3.38630 3.43196 3.45333 3.50223 3.59508 3.63648 3.84442 3.93493 3.97067 3.99362 4.02811 4.19087 4.22222 4.38227 4.44541 4.47720 4.50633 4.52070 4.54767 4.65121 4.69025 4.81555 4.85451 4.91659 4.97396 5.01533 5.12820 5.24664 5.29030 5.47514 5.48901 5.52821 5.81168 6.39072 6.49351 6.75337 7.14372 7.18664 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.165 4.165 5 C 0.563 3.437 6 O -0.514 6.514 7 N -0.712 5.712 8 C 0.120 3.880 9 H 0.108 0.892 10 C -0.135 4.135 11 C -0.122 4.122 12 H 0.094 0.906 13 C 0.137 3.863 14 N -0.379 5.379 15 C 0.251 3.749 16 N -0.547 5.547 17 C 0.196 3.804 18 N -0.311 5.311 19 C -0.136 4.136 20 C 0.192 3.808 21 O -0.472 6.472 22 C -0.153 4.153 23 C -0.063 4.063 24 O -0.537 6.537 25 Si 0.684 3.316 26 C -0.072 4.072 27 H 0.077 0.923 28 H 0.069 0.931 29 H 0.072 0.928 30 H 0.129 0.871 31 H 0.398 0.602 32 H 0.094 0.906 33 H 0.076 0.924 34 H 0.104 0.896 35 H 0.093 0.907 36 H 0.218 0.782 37 H 0.216 0.784 38 H 0.079 0.921 39 H 0.102 0.898 40 H 0.400 0.600 41 H 0.119 0.881 42 H 0.377 0.623 43 H -0.255 1.255 44 H -0.251 1.251 45 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.014 1.344 6.491 9.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.350 3.650 6 O -0.389 6.389 7 N -0.364 5.364 8 C 0.015 3.985 9 H 0.126 0.874 10 C -0.174 4.174 11 C -0.142 4.142 12 H 0.112 0.888 13 C 0.015 3.985 14 N -0.170 5.170 15 C -0.046 4.046 16 N -0.274 5.274 17 C -0.107 4.107 18 N -0.139 5.139 19 C -0.175 4.175 20 C 0.145 3.855 21 O -0.284 6.284 22 C -0.154 4.154 23 C -0.173 4.173 24 O -0.342 6.342 25 Si 0.585 3.415 26 C -0.090 4.090 27 H 0.096 0.904 28 H 0.088 0.912 29 H 0.091 0.909 30 H 0.147 0.853 31 H 0.233 0.767 32 H 0.112 0.888 33 H 0.095 0.905 34 H 0.123 0.877 35 H 0.111 0.889 36 H 0.234 0.766 37 H 0.232 0.768 38 H 0.098 0.902 39 H 0.121 0.879 40 H 0.259 0.741 41 H 0.137 0.863 42 H 0.224 0.776 43 H -0.180 1.180 44 H -0.176 1.176 45 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -5.397 0.376 4.752 7.201 hybrid contribution -0.130 0.722 0.363 0.818 sum -5.528 1.098 5.115 7.610 Atomic orbital electron populations 1.20841 0.89918 1.03558 1.03052 1.19796 0.96826 0.92234 1.00885 1.21103 0.92108 0.98261 0.97140 1.20363 0.93928 0.93407 1.09145 1.18022 0.87314 0.83238 0.76428 1.90844 1.12971 1.87172 1.47913 1.45559 1.09886 1.04945 1.76055 1.21819 0.97204 0.82231 0.97257 0.87418 1.23421 0.96902 0.99275 0.97758 1.22905 0.99789 0.94368 0.97103 0.88766 1.21926 0.99727 0.97911 0.78913 1.50601 1.22287 1.35467 1.08617 1.26125 0.88895 0.95340 0.94258 1.70569 1.28594 1.21879 1.06338 1.26076 0.89619 0.94375 1.00650 1.78108 1.23924 1.20980 0.90884 1.23357 1.00237 0.98355 0.95551 1.18225 0.83994 0.89680 0.93640 1.84685 1.14129 1.95864 1.33721 1.20712 0.94039 0.95852 1.04772 1.25019 1.04367 0.98667 0.89252 1.86541 1.37218 1.94321 1.16112 0.95180 0.83138 0.77551 0.85585 1.20992 0.92585 0.97963 0.97449 0.90435 0.91153 0.90862 0.85277 0.76654 0.88802 0.90543 0.87745 0.88892 0.76592 0.76769 0.90207 0.87949 0.74093 0.86327 0.77596 1.17996 1.17618 0.84545 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.46 10.00 36.01 0.36 0.82 16 2 C -0.10 0.17 5.87 -104.67 -0.61 -0.44 16 3 C -0.07 0.08 9.18 -39.20 -0.36 -0.28 16 4 C -0.16 -0.25 5.89 -104.84 -0.62 -0.87 16 5 C 0.56 1.55 7.76 -12.46 -0.10 1.46 16 6 O -0.51 -3.34 14.76 -16.59 -0.24 -3.58 16 7 N -0.71 0.40 5.21 -54.05 -0.28 0.12 16 8 C 0.12 -0.12 4.32 -67.12 -0.29 -0.41 16 9 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 10 C -0.13 0.10 7.43 -25.91 -0.19 -0.09 16 11 C -0.12 0.38 3.73 -89.81 -0.33 0.05 16 12 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 13 C 0.14 -0.48 6.39 -4.04 -0.03 -0.51 16 14 N -0.38 0.07 3.69 -62.63 -0.23 -0.16 16 15 C 0.25 -0.10 12.63 -90.65 -1.14 -1.24 16 16 N -0.55 -1.47 11.19 -15.83 -0.18 -1.65 16 17 C 0.20 0.44 13.03 -91.81 -1.20 -0.76 16 18 N -0.31 -0.81 12.57 29.29 0.37 -0.44 16 19 C -0.14 0.56 7.39 -25.92 -0.19 0.37 16 20 C 0.19 0.46 6.69 -38.70 -0.26 0.20 16 21 O -0.47 -1.81 10.91 -40.55 -0.44 -2.25 16 22 C -0.15 -0.07 5.27 -104.51 -0.55 -0.62 16 23 C -0.06 -0.02 2.38 36.00 0.09 0.07 16 24 O -0.54 0.02 12.88 -35.23 -0.45 -0.43 16 25 Si 0.68 -0.77 29.91 -169.99 -5.08 -5.85 16 26 C -0.07 0.11 8.30 -39.54 -0.33 -0.22 16 27 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 28 H 0.07 -0.30 8.08 -51.93 -0.42 -0.72 16 29 H 0.07 -0.32 8.08 -51.93 -0.42 -0.74 16 30 H 0.13 -0.49 6.40 -52.49 -0.34 -0.83 16 31 H 0.40 -1.19 6.73 -40.82 -0.27 -1.47 16 32 H 0.09 -0.07 7.90 -51.93 -0.41 -0.48 16 33 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 34 H 0.10 -0.67 8.09 -51.93 -0.42 -1.09 16 35 H 0.09 -0.34 7.84 -51.93 -0.41 -0.74 16 36 H 0.22 -1.05 8.06 -52.49 -0.42 -1.47 16 37 H 0.22 -0.13 8.06 -52.49 -0.42 -0.55 16 38 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 39 H 0.10 -0.53 8.10 -51.93 -0.42 -0.95 16 40 H 0.40 0.40 9.06 45.56 0.41 0.82 16 41 H 0.12 0.25 7.83 -51.93 -0.41 -0.16 16 42 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 43 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 45 H 0.14 -0.55 5.10 -52.49 -0.27 -0.82 16 LS Contribution 379.65 15.07 5.72 5.72 Total: 0.00 -12.74 379.65 -11.68 -24.41 By element: Atomic # 1 Polarization: -8.32 SS G_CDS: -5.09 Total: -13.41 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -5.76 Total: -2.47 kcal Atomic # 7 Polarization: -1.80 SS G_CDS: -0.32 Total: -2.13 kcal Atomic # 8 Polarization: -5.13 SS G_CDS: -1.14 Total: -6.27 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.08 Total: -5.85 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -12.74 -11.68 -24.41 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13422088.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.891 kcal (2) G-P(sol) polarization free energy of solvation -12.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.413 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds