Wall clock time and date at job start Sun Mar 7 2021 04:41:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.46743 * 2 1 4 4 C 1.50690 * 109.47377 * 120.00000 * 2 1 3 5 5 C 1.34187 * 125.43680 * 65.31163 * 4 2 1 6 6 C 1.47021 * 105.95045 * 180.14601 * 5 4 2 7 7 C 1.47386 * 127.18855 * 179.83608 * 6 5 4 8 8 O 1.21615 * 120.00107 * 359.70561 * 7 6 5 9 9 N 1.34773 * 119.99850 * 179.70801 * 7 6 5 10 10 C 1.46498 * 120.00090 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.90871 * 336.25607 * 10 9 7 12 12 C 1.53957 * 113.53568 * 107.50848 * 10 9 7 13 13 C 1.53772 * 87.02089 * 89.18896 * 12 10 9 14 14 H 1.08992 * 113.62120 * 270.77274 * 13 12 10 15 15 C 1.53004 * 113.61242 * 139.94929 * 13 12 10 16 16 N 1.46504 * 109.46764 * 85.86912 * 15 13 12 17 17 C 1.34424 * 126.82251 * 124.97843 * 16 15 13 18 18 N 1.30835 * 108.07632 * 179.97438 * 17 16 15 19 19 C 1.33244 * 109.82681 * 359.97438 * 18 17 16 20 20 N 1.30712 * 108.94650 * 0.02562 * 19 18 17 21 21 C 1.53780 * 113.61776 * 205.00367 * 10 9 7 22 22 C 1.36414 * 105.62034 * 359.57433 * 6 5 4 23 23 O 1.33651 * 108.39370 * 0.26005 * 22 6 5 24 24 H 0.96698 * 114.00173 * 299.99675 * 1 2 3 25 25 H 1.09000 * 109.46764 * 240.00161 * 2 1 3 26 26 H 1.48498 * 109.99812 * 178.68317 * 3 2 1 27 27 H 1.48504 * 110.00317 * 300.00030 * 3 2 1 28 28 H 1.07995 * 127.02244 * 359.97438 * 5 4 2 29 29 H 0.97000 * 120.00080 * 0.02562 * 9 7 6 30 30 H 1.08996 * 113.66377 * 334.66008 * 12 10 9 31 31 H 1.09005 * 113.61170 * 203.71262 * 12 10 9 32 32 H 1.08996 * 109.47634 * 325.86623 * 15 13 12 33 33 H 1.09002 * 109.46960 * 205.86059 * 15 13 12 34 34 H 1.08003 * 125.96766 * 0.02562 * 17 16 15 35 35 H 1.07994 * 125.52335 * 180.02562 * 19 18 17 36 36 H 1.08995 * 113.61560 * 156.33705 * 21 10 9 37 37 H 1.08999 * 113.61658 * 25.43402 * 21 10 9 38 38 H 1.08001 * 125.80750 * 180.26399 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.7602 -2.0135 1.5008 6 6 2.4123 -2.2461 2.7978 7 6 2.4999 -3.5191 3.5353 8 8 1.9926 -4.5243 3.0757 9 7 3.1423 -3.5692 4.7190 10 6 3.2289 -4.8345 5.4524 11 1 2.4342 -5.5326 5.1895 12 6 4.6347 -5.4620 5.4317 13 6 4.9301 -4.6459 6.7011 14 1 5.3309 -3.6528 6.4984 15 6 5.7423 -5.4123 7.7471 16 7 7.1708 -5.2749 7.4528 17 6 8.1253 -4.8244 8.2853 18 7 9.2675 -4.8552 7.6480 19 6 9.0831 -5.3180 6.4122 20 7 7.8153 -5.5887 6.2451 21 6 3.4157 -4.6563 6.9684 22 6 2.9244 -1.0387 3.1731 23 8 2.6268 -0.1421 2.2277 24 1 -0.3933 0.4416 0.7650 25 1 1.7923 -0.5138 -0.8900 26 1 3.5344 1.7704 0.0321 27 1 1.5613 2.4680 -1.2085 28 1 1.2459 -2.7419 0.8916 29 1 3.5466 -2.7674 5.0858 30 1 5.2342 -5.1639 4.5716 31 1 4.6342 -6.5397 5.5956 32 1 5.4657 -6.4662 7.7213 33 1 5.5347 -5.0062 8.7372 34 1 7.9756 -4.4952 9.3030 35 1 9.8559 -5.4483 5.6692 36 1 3.0814 -5.5132 7.5532 37 1 3.0326 -3.7087 7.3472 38 1 3.4765 -0.8409 4.0800 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:30 Heat of formation + Delta-G solvation = 79.105945 kcal Electronic energy + Delta-G solvation = -23906.400986 eV Core-core repulsion = 20141.764260 eV Total energy + Delta-G solvation = -3764.636726 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.121 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -43.76969 -43.01229 -41.27900 -39.38527 -38.07215 -35.50253 -34.31748 -33.58471 -32.14712 -31.78419 -29.23566 -26.92549 -26.79909 -25.53324 -24.16666 -22.91590 -22.46839 -22.32428 -21.20930 -20.48076 -19.39521 -18.38594 -17.87913 -17.52771 -17.47478 -17.07517 -16.83659 -16.28526 -16.14078 -15.98893 -15.70631 -15.51232 -15.25847 -14.89338 -14.66595 -14.23549 -14.17253 -14.01969 -13.68500 -13.63993 -13.22520 -12.97162 -12.90368 -12.40405 -12.17431 -11.85275 -11.47056 -11.10491 -10.94277 -10.91595 -10.75138 -10.68952 -10.63816 -10.18047 -9.86227 -5.10504 0.17341 0.66426 0.85687 1.08070 1.28936 1.41933 1.72615 1.87117 1.94280 2.03805 2.28343 3.06885 3.16044 3.22937 3.34600 3.37443 3.41850 3.51891 3.59444 3.81713 3.85210 3.92069 3.95742 4.17890 4.20316 4.31237 4.36571 4.45785 4.52899 4.53481 4.65789 4.73123 4.80008 4.94842 4.99182 5.17661 5.27520 5.44462 5.47321 5.78152 5.79658 6.34046 6.35515 7.12987 7.14150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.029 4.029 3 Si 0.707 3.293 4 C -0.058 4.058 5 C -0.123 4.123 6 C -0.237 4.237 7 C 0.591 3.409 8 O -0.527 6.527 9 N -0.711 5.711 10 C 0.120 3.880 11 H 0.109 0.891 12 C -0.134 4.134 13 C -0.123 4.123 14 H 0.094 0.906 15 C 0.137 3.863 16 N -0.379 5.379 17 C 0.251 3.749 18 N -0.547 5.547 19 C 0.196 3.804 20 N -0.312 5.312 21 C -0.136 4.136 22 C 0.032 3.968 23 O -0.165 6.165 24 H 0.384 0.616 25 H 0.134 0.866 26 H -0.254 1.254 27 H -0.247 1.247 28 H 0.162 0.838 29 H 0.398 0.602 30 H 0.076 0.924 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.104 0.896 34 H 0.218 0.782 35 H 0.216 0.784 36 H 0.102 0.898 37 H 0.080 0.920 38 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.398 4.230 6.322 7.735 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.606 3.394 4 C -0.106 4.106 5 C -0.142 4.142 6 C -0.242 4.242 7 C 0.379 3.621 8 O -0.404 6.404 9 N -0.363 5.363 10 C 0.014 3.986 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.142 4.142 14 H 0.112 0.888 15 C 0.015 3.985 16 N -0.170 5.170 17 C -0.046 4.046 18 N -0.274 5.274 19 C -0.107 4.107 20 N -0.139 5.139 21 C -0.174 4.174 22 C -0.039 4.039 23 O -0.061 6.061 24 H 0.232 0.768 25 H 0.151 0.849 26 H -0.178 1.178 27 H -0.171 1.171 28 H 0.180 0.820 29 H 0.232 0.768 30 H 0.095 0.905 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.123 0.877 34 H 0.234 0.766 35 H 0.232 0.768 36 H 0.121 0.879 37 H 0.099 0.901 38 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges -1.211 3.883 4.467 6.041 hybrid contribution 0.310 -0.476 0.487 0.749 sum -0.901 3.407 4.955 6.080 Atomic orbital electron populations 1.86581 1.16078 1.81734 1.49116 1.24470 0.85293 1.11385 0.92769 0.94273 0.81378 0.76506 0.87213 1.22750 1.01698 0.93420 0.92715 1.22550 1.01123 0.95323 0.95244 1.21502 1.09270 0.94236 0.99180 1.17251 0.77562 0.87126 0.80149 1.90828 1.46425 1.35681 1.67436 1.45468 1.57576 1.11820 1.21391 1.21875 0.99086 0.86281 0.91313 0.87338 1.23444 0.96018 1.00104 0.97735 1.22907 0.94837 1.00139 0.96308 0.88754 1.21922 0.74493 1.02469 0.99610 1.50599 1.09012 1.47737 1.09636 1.26128 0.83843 0.96012 0.98607 1.70569 1.25957 1.24163 1.06701 1.26074 0.93437 0.96824 0.94366 1.78100 1.08229 1.24383 1.03217 1.23351 0.94203 1.03939 0.95949 1.24443 0.99410 0.86777 0.93243 1.83683 1.57136 1.38853 1.26420 0.76817 0.84903 1.17784 1.17095 0.82013 0.76819 0.90515 0.88772 0.88899 0.87739 0.76581 0.76769 0.87916 0.90142 0.77084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.27 12.88 -35.23 -0.45 -0.19 16 2 C -0.03 0.02 2.97 36.00 0.11 0.13 16 3 Si 0.71 -1.15 32.09 -169.99 -5.46 -6.61 16 4 C -0.06 -0.01 6.18 -35.74 -0.22 -0.24 16 5 C -0.12 -0.24 10.90 -37.45 -0.41 -0.64 16 6 C -0.24 -0.25 6.31 -103.27 -0.65 -0.90 16 7 C 0.59 1.41 7.81 -12.54 -0.10 1.32 16 8 O -0.53 -3.57 16.58 5.26 0.09 -3.48 16 9 N -0.71 0.92 5.25 -54.01 -0.28 0.64 16 10 C 0.12 -0.18 4.33 -67.03 -0.29 -0.47 16 11 H 0.11 0.05 7.47 -51.93 -0.39 -0.34 16 12 C -0.13 0.17 7.44 -25.83 -0.19 -0.02 16 13 C -0.12 0.45 3.72 -89.81 -0.33 0.11 16 14 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 15 C 0.14 -0.53 6.37 -4.04 -0.03 -0.56 16 16 N -0.38 0.20 3.69 -62.63 -0.23 -0.04 16 17 C 0.25 -0.16 12.63 -90.66 -1.14 -1.30 16 18 N -0.55 -1.35 11.19 -15.83 -0.18 -1.53 16 19 C 0.20 0.38 13.03 -91.81 -1.20 -0.82 16 20 N -0.31 -0.69 12.57 29.29 0.37 -0.33 16 21 C -0.14 0.62 7.39 -25.92 -0.19 0.43 16 22 C 0.03 -0.06 11.61 30.07 0.35 0.29 16 23 O -0.16 0.11 8.90 7.65 0.07 0.18 16 24 H 0.38 -1.72 8.70 45.56 0.40 -1.32 16 25 H 0.13 -0.13 7.96 -51.93 -0.41 -0.54 16 26 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 27 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 28 H 0.16 0.40 8.06 -52.49 -0.42 -0.02 16 29 H 0.40 -1.71 7.67 -40.82 -0.31 -2.02 16 30 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 31 H 0.09 -0.11 7.92 -51.93 -0.41 -0.52 16 32 H 0.09 -0.37 7.87 -51.93 -0.41 -0.78 16 33 H 0.10 -0.71 8.09 -51.93 -0.42 -1.13 16 34 H 0.22 -1.10 8.06 -52.48 -0.42 -1.52 16 35 H 0.22 -0.19 8.06 -52.49 -0.42 -0.61 16 36 H 0.10 -0.57 8.10 -51.93 -0.42 -0.99 16 37 H 0.08 -0.42 8.14 -51.93 -0.42 -0.85 16 38 H 0.21 -1.38 7.47 -52.49 -0.39 -1.77 16 LS Contribution 337.93 15.07 5.09 5.09 Total: 0.00 -12.37 337.93 -9.79 -22.16 By element: Atomic # 1 Polarization: -8.73 SS G_CDS: -4.50 Total: -13.24 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -4.30 Total: -2.67 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.32 Total: -1.25 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -0.30 Total: -3.48 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.46 Total: -6.61 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -12.37 -9.79 -22.16 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 101.264 kcal (2) G-P(sol) polarization free energy of solvation -12.370 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.788 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.158 kcal (6) G-S(sol) free energy of system = (1) + (5) 79.106 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds