Wall clock time and date at job start Sun Mar 7 2021 04:41:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86299 * 109.46743 * 2 1 4 4 C 1.50690 * 109.47377 * 120.00000 * 2 1 3 5 5 C 1.34187 * 125.43680 * 65.31163 * 4 2 1 6 6 C 1.47021 * 105.95045 * 180.14601 * 5 4 2 7 7 C 1.47386 * 127.18855 * 179.83608 * 6 5 4 8 8 O 1.21615 * 120.00107 * 359.70561 * 7 6 5 9 9 N 1.34773 * 119.99850 * 179.70801 * 7 6 5 10 10 C 1.46498 * 120.00090 * 179.97438 * 9 7 6 11 11 H 1.08999 * 112.90871 * 336.25607 * 10 9 7 12 12 C 1.53957 * 113.53568 * 107.50848 * 10 9 7 13 13 C 1.53772 * 87.02089 * 89.18896 * 12 10 9 14 14 H 1.08992 * 113.62120 * 270.77274 * 13 12 10 15 15 C 1.53004 * 113.61242 * 139.94929 * 13 12 10 16 16 N 1.46504 * 109.46764 * 85.86912 * 15 13 12 17 17 C 1.34424 * 126.82251 * 124.97843 * 16 15 13 18 18 N 1.30835 * 108.07632 * 179.97438 * 17 16 15 19 19 C 1.33244 * 109.82681 * 359.97438 * 18 17 16 20 20 N 1.30712 * 108.94650 * 0.02562 * 19 18 17 21 21 C 1.53780 * 113.61776 * 205.00367 * 10 9 7 22 22 C 1.36414 * 105.62034 * 359.57433 * 6 5 4 23 23 O 1.33651 * 108.39370 * 0.26005 * 22 6 5 24 24 H 0.96698 * 114.00173 * 299.99675 * 1 2 3 25 25 H 1.09000 * 109.46764 * 240.00161 * 2 1 3 26 26 H 1.48498 * 109.99812 * 178.68317 * 3 2 1 27 27 H 1.48504 * 110.00317 * 300.00030 * 3 2 1 28 28 H 1.07995 * 127.02244 * 359.97438 * 5 4 2 29 29 H 0.97000 * 120.00080 * 0.02562 * 9 7 6 30 30 H 1.08996 * 113.66377 * 334.66008 * 12 10 9 31 31 H 1.09005 * 113.61170 * 203.71262 * 12 10 9 32 32 H 1.08996 * 109.47634 * 325.86623 * 15 13 12 33 33 H 1.09002 * 109.46960 * 205.86059 * 15 13 12 34 34 H 1.08003 * 125.96766 * 0.02562 * 17 16 15 35 35 H 1.07994 * 125.52335 * 180.02562 * 19 18 17 36 36 H 1.08995 * 113.61560 * 156.33705 * 21 10 9 37 37 H 1.08999 * 113.61658 * 25.43402 * 21 10 9 38 38 H 1.08001 * 125.80750 * 180.26399 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 1.7602 -2.0135 1.5008 6 6 2.4123 -2.2461 2.7978 7 6 2.4999 -3.5191 3.5353 8 8 1.9926 -4.5243 3.0757 9 7 3.1423 -3.5692 4.7190 10 6 3.2289 -4.8345 5.4524 11 1 2.4342 -5.5326 5.1895 12 6 4.6347 -5.4620 5.4317 13 6 4.9301 -4.6459 6.7011 14 1 5.3309 -3.6528 6.4984 15 6 5.7423 -5.4123 7.7471 16 7 7.1708 -5.2749 7.4528 17 6 8.1253 -4.8244 8.2853 18 7 9.2675 -4.8552 7.6480 19 6 9.0831 -5.3180 6.4122 20 7 7.8153 -5.5887 6.2451 21 6 3.4157 -4.6563 6.9684 22 6 2.9244 -1.0387 3.1731 23 8 2.6268 -0.1421 2.2277 24 1 -0.3933 0.4416 0.7650 25 1 1.7923 -0.5138 -0.8900 26 1 3.5344 1.7704 0.0321 27 1 1.5613 2.4680 -1.2085 28 1 1.2459 -2.7419 0.8916 29 1 3.5466 -2.7674 5.0858 30 1 5.2342 -5.1639 4.5716 31 1 4.6342 -6.5397 5.5956 32 1 5.4657 -6.4662 7.7213 33 1 5.5347 -5.0062 8.7372 34 1 7.9756 -4.4952 9.3030 35 1 9.8559 -5.4483 5.6692 36 1 3.0814 -5.5132 7.5532 37 1 3.0326 -3.7087 7.3472 38 1 3.4765 -0.8409 4.0800 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_13456056.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:29 Heat of formation + Delta-G solvation = 76.238858 kcal Electronic energy + Delta-G solvation = -23906.525312 eV Core-core repulsion = 20141.764260 eV Total energy + Delta-G solvation = -3764.761053 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.121 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -43.76201 -42.96318 -41.24851 -39.42741 -38.02012 -35.47076 -34.35390 -33.57290 -32.14252 -31.75782 -29.08924 -26.77437 -26.71617 -25.50261 -24.10288 -22.84002 -22.40773 -22.34736 -21.18786 -20.38139 -19.34188 -18.25450 -17.82654 -17.52344 -17.49574 -16.97640 -16.74758 -16.26521 -16.06662 -16.02261 -15.66881 -15.41185 -15.19936 -14.88735 -14.58742 -14.27482 -14.07379 -14.02824 -13.63402 -13.49123 -13.12683 -12.84803 -12.82838 -12.23945 -12.20000 -11.73824 -11.31425 -11.26794 -11.00824 -10.95386 -10.77720 -10.64945 -10.54496 -10.19592 -9.83189 -4.99971 0.21051 0.72991 0.77311 1.15887 1.48173 1.48676 1.78689 1.91859 1.97568 2.02805 2.17787 3.27416 3.31927 3.43957 3.45851 3.55523 3.56016 3.66060 3.77330 3.92601 3.97792 4.13895 4.22964 4.25172 4.35130 4.45207 4.46532 4.60095 4.68744 4.76770 4.82470 4.86270 4.98822 5.03856 5.08019 5.13399 5.34354 5.47129 5.53541 5.79076 5.98012 6.40251 6.61534 7.08750 7.15879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.038 4.038 3 Si 0.802 3.198 4 C -0.051 4.051 5 C -0.154 4.154 6 C -0.270 4.270 7 C 0.588 3.412 8 O -0.587 6.587 9 N -0.692 5.692 10 C 0.107 3.893 11 H 0.083 0.917 12 C -0.139 4.139 13 C -0.108 4.108 14 H 0.095 0.905 15 C 0.130 3.870 16 N -0.378 5.378 17 C 0.257 3.743 18 N -0.586 5.586 19 C 0.182 3.818 20 N -0.345 5.345 21 C -0.111 4.111 22 C 0.067 3.933 23 O -0.162 6.162 24 H 0.400 0.600 25 H 0.129 0.871 26 H -0.289 1.289 27 H -0.284 1.284 28 H 0.142 0.858 29 H 0.415 0.585 30 H 0.046 0.954 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.146 0.854 34 H 0.260 0.740 35 H 0.227 0.773 36 H 0.119 0.881 37 H 0.100 0.900 38 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.297 5.967 9.167 11.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.147 4.147 3 Si 0.705 3.295 4 C -0.099 4.099 5 C -0.174 4.174 6 C -0.275 4.275 7 C 0.377 3.623 8 O -0.468 6.468 9 N -0.343 5.343 10 C 0.002 3.998 11 H 0.101 0.899 12 C -0.178 4.178 13 C -0.128 4.128 14 H 0.113 0.887 15 C 0.009 3.991 16 N -0.168 5.168 17 C -0.039 4.039 18 N -0.314 5.314 19 C -0.120 4.120 20 N -0.173 5.173 21 C -0.149 4.149 22 C -0.003 4.003 23 O -0.057 6.057 24 H 0.251 0.749 25 H 0.146 0.854 26 H -0.216 1.216 27 H -0.211 1.211 28 H 0.160 0.840 29 H 0.253 0.747 30 H 0.065 0.935 31 H 0.107 0.893 32 H 0.112 0.888 33 H 0.164 0.836 34 H 0.276 0.724 35 H 0.243 0.757 36 H 0.137 0.863 37 H 0.119 0.881 38 H 0.278 0.722 Dipole moment (debyes) X Y Z Total from point charges -1.127 5.632 7.367 9.341 hybrid contribution 0.279 -1.042 -0.408 1.153 sum -0.848 4.590 6.960 8.380 Atomic orbital electron populations 1.86545 1.16187 1.82249 1.50354 1.24701 0.85376 1.12333 0.92261 0.93183 0.77691 0.73656 0.84967 1.22783 1.01319 0.92779 0.93052 1.22572 1.02492 0.96003 0.96306 1.21469 1.11560 0.94997 0.99447 1.17541 0.77104 0.86898 0.80778 1.90790 1.49290 1.37645 1.69039 1.45313 1.56190 1.12699 1.20141 1.21989 0.98014 0.85910 0.93917 0.89925 1.23424 0.95828 1.00294 0.98286 1.22782 0.95713 0.99462 0.94796 0.88697 1.22271 0.72600 1.02886 1.01314 1.50778 1.10131 1.47143 1.08771 1.26915 0.82924 0.94391 0.99691 1.70546 1.27949 1.25698 1.07209 1.26400 0.93834 0.96936 0.94874 1.78029 1.08608 1.25410 1.05243 1.23271 0.92949 1.05679 0.93042 1.25289 0.96703 0.85017 0.93316 1.83712 1.56752 1.38886 1.26378 0.74864 0.85396 1.21608 1.21083 0.83985 0.74722 0.93531 0.89321 0.88825 0.83625 0.72443 0.75704 0.86323 0.88114 0.72165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.25 12.88 -148.98 -1.92 -1.67 16 2 C -0.04 0.04 2.97 71.23 0.21 0.25 16 3 Si 0.80 -2.74 32.09 68.60 2.20 -0.54 16 4 C -0.05 -0.05 6.18 24.76 0.15 0.10 16 5 C -0.15 -0.91 10.90 23.65 0.26 -0.66 16 6 C -0.27 -0.80 6.31 -18.99 -0.12 -0.92 16 7 C 0.59 3.84 7.81 86.65 0.68 4.52 16 8 O -0.59 -10.04 16.58 -4.08 -0.07 -10.11 16 9 N -0.69 1.68 5.25 -443.06 -2.33 -0.64 16 10 C 0.11 -0.26 4.33 45.58 0.20 -0.06 16 11 H 0.08 0.26 7.47 -2.39 -0.02 0.25 16 12 C -0.14 0.21 7.44 31.18 0.23 0.44 16 13 C -0.11 0.95 3.72 -10.27 -0.04 0.91 16 14 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 15 C 0.13 -1.29 6.37 86.38 0.55 -0.74 16 16 N -0.38 0.81 3.69 -352.05 -1.30 -0.49 16 17 C 0.26 -0.74 12.63 180.36 2.28 1.54 16 18 N -0.59 -2.81 11.19 -204.00 -2.28 -5.09 16 19 C 0.18 0.87 13.03 180.76 2.36 3.22 16 20 N -0.34 -1.75 12.57 -61.25 -0.77 -2.52 16 21 C -0.11 1.25 7.39 31.12 0.23 1.48 16 22 C 0.07 -0.37 11.61 67.39 0.78 0.41 16 23 O -0.16 0.42 8.90 4.47 0.04 0.46 16 24 H 0.40 -3.62 8.70 -74.06 -0.64 -4.27 16 25 H 0.13 -0.06 7.96 -2.39 -0.02 -0.08 16 26 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 27 H -0.28 -0.77 7.11 99.48 0.71 -0.06 16 28 H 0.14 1.28 8.06 -2.91 -0.02 1.26 16 29 H 0.42 -4.26 7.67 -92.71 -0.71 -4.97 16 30 H 0.05 0.22 8.14 -2.39 -0.02 0.20 16 31 H 0.09 -0.06 7.92 -2.38 -0.02 -0.08 16 32 H 0.09 -0.89 7.87 -2.39 -0.02 -0.91 16 33 H 0.15 -2.61 8.09 -2.39 -0.02 -2.63 16 34 H 0.26 -3.48 8.06 -2.91 -0.02 -3.50 16 35 H 0.23 -0.04 8.06 -2.91 -0.02 -0.07 16 36 H 0.12 -1.63 8.10 -2.39 -0.02 -1.65 16 37 H 0.10 -1.44 8.14 -2.39 -0.02 -1.46 16 38 H 0.26 -4.44 7.47 -2.91 -0.02 -4.47 16 Total: 0.00 -34.54 337.93 1.14 -33.40 By element: Atomic # 1 Polarization: -23.08 SS G_CDS: -0.21 Total: -23.28 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: 7.77 Total: 10.49 kcal Atomic # 7 Polarization: -2.07 SS G_CDS: -6.68 Total: -8.74 kcal Atomic # 8 Polarization: -9.38 SS G_CDS: -1.95 Total: -11.32 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.20 Total: -0.54 kcal Total: -34.54 1.14 -33.40 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13456056.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.641 kcal (2) G-P(sol) polarization free energy of solvation -34.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.402 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds