Wall clock time and date at job start Sun Mar 7 2021 04:41:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.37878 * 126.45846 * 2 1 4 4 C 1.46679 * 126.22960 * 359.97438 * 3 2 1 5 5 O 1.21694 * 119.99955 * 0.02562 * 4 3 2 6 6 N 1.34771 * 119.99598 * 179.97438 * 4 3 2 7 7 C 1.46507 * 119.99876 * 180.02562 * 6 4 3 8 8 H 1.09002 * 112.84461 * 23.81496 * 7 6 4 9 9 C 1.53786 * 113.61298 * 155.00254 * 7 6 4 10 10 C 1.53787 * 87.07742 * 89.20185 * 9 7 6 11 11 H 1.08990 * 113.61651 * 270.79932 * 10 9 7 12 12 C 1.53004 * 113.60948 * 139.98068 * 10 9 7 13 13 N 1.46504 * 109.46764 * 175.00417 * 12 10 9 14 14 C 1.34424 * 126.82251 * 124.97843 * 13 12 10 15 15 N 1.30835 * 108.07632 * 179.97438 * 14 13 12 16 16 C 1.33244 * 109.82681 * 359.97438 * 15 14 13 17 17 N 1.30712 * 108.94650 * 0.02562 * 16 15 14 18 18 C 1.53770 * 113.69329 * 252.53983 * 7 6 4 19 19 N 1.37649 * 107.53507 * 180.25706 * 3 2 1 20 20 C 1.35538 * 108.64457 * 359.62621 * 19 3 2 21 21 C 1.50693 * 125.56624 * 180.18673 * 20 19 3 22 22 O 1.42901 * 109.46867 * 300.24801 * 21 20 19 23 23 Si 1.86300 * 109.47191 * 180.24887 * 21 20 19 24 24 C 1.35456 * 108.86820 * 0.37405 * 20 19 3 25 25 H 1.09005 * 109.46871 * 90.00281 * 1 2 3 26 26 H 1.08997 * 109.47746 * 209.99869 * 1 2 3 27 27 H 1.09002 * 109.47637 * 330.01047 * 1 2 3 28 28 H 0.96999 * 120.00622 * 0.02562 * 6 4 3 29 29 H 1.08998 * 113.61666 * 334.65676 * 9 7 6 30 30 H 1.08999 * 113.69217 * 203.76122 * 9 7 6 31 31 H 1.08996 * 109.47634 * 55.00128 * 12 10 9 32 32 H 1.09002 * 109.46960 * 294.99564 * 12 10 9 33 33 H 1.08003 * 125.96766 * 0.02562 * 14 13 12 34 34 H 1.07994 * 125.52303 * 179.97438 * 16 15 14 35 35 H 1.09000 * 113.61649 * 156.32137 * 18 7 6 36 36 H 1.09005 * 113.61536 * 25.42350 * 18 7 6 37 37 H 0.96992 * 125.68108 * 179.73914 * 19 3 2 38 38 H 1.09001 * 109.47382 * 60.24434 * 21 20 19 39 39 H 0.96703 * 113.99884 * 299.99870 * 22 21 20 40 40 H 1.48497 * 110.00093 * 179.97438 * 23 21 20 41 41 H 1.48496 * 109.99882 * 301.31447 * 23 21 20 42 42 H 1.07998 * 126.06690 * 179.74772 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 0.7025 2.7766 -0.0006 6 7 2.8036 3.4999 0.0001 7 6 2.3677 4.8986 0.0001 8 1 1.3642 5.0291 0.4053 9 6 3.4034 5.8666 0.5962 10 6 3.9841 5.9941 -0.8221 11 1 4.7518 5.2542 -1.0478 12 6 4.4071 7.4190 -1.1852 13 7 5.0530 7.4164 -2.5002 14 6 4.7109 8.1589 -3.5673 15 7 5.5299 7.8665 -4.5447 16 6 6.4048 6.9461 -4.1412 17 7 6.1532 6.6384 -2.8960 18 6 2.5878 5.6144 -1.3429 19 7 3.6283 0.6625 -0.0059 20 6 3.6218 -0.6928 -0.0011 21 6 4.8433 -1.5752 -0.0010 22 8 5.6239 -1.3081 -1.1678 23 14 4.3182 -3.3627 -0.0010 24 6 2.3379 -1.1247 -0.0006 25 1 -0.3633 -0.0001 -1.0277 26 1 -0.3634 -0.8899 0.5138 27 1 -0.3634 0.8901 0.5137 28 1 3.7499 3.2868 0.0005 29 1 4.0837 5.3955 1.3057 30 1 2.9704 6.7921 0.9756 31 1 5.1069 7.7920 -0.4374 32 1 3.5281 8.0629 -1.2135 33 1 3.9017 8.8730 -3.6100 34 1 7.1934 6.5224 -4.7454 35 1 1.9305 6.4707 -1.4942 36 1 2.6096 4.9399 -2.1989 37 1 4.4190 1.2243 -0.0108 38 1 5.4387 -1.3715 0.8890 39 1 5.1564 -1.4681 -1.9990 40 1 5.5138 -4.2433 -0.0016 41 1 3.4791 -3.6455 1.1910 42 1 2.0136 -2.1548 -0.0011 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13940406.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:33 Heat of formation + Delta-G solvation = 97.592080 kcal Electronic energy + Delta-G solvation = -26117.015474 eV Core-core repulsion = 22295.361410 eV Total energy + Delta-G solvation = -3821.654064 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.02822 -42.63153 -41.17478 -39.34510 -37.81688 -35.58397 -34.21326 -33.33294 -32.15873 -31.65745 -29.31219 -28.15696 -27.03181 -26.94331 -24.73047 -23.07560 -22.89458 -22.42182 -21.64014 -20.58341 -20.30792 -19.59057 -18.46605 -18.11812 -17.30647 -16.91228 -16.78676 -16.45127 -16.06334 -16.00693 -15.75960 -15.43891 -15.24842 -15.12615 -14.94469 -14.65962 -14.41016 -14.05610 -13.88767 -13.74159 -13.60000 -13.49267 -13.38536 -12.94622 -12.92718 -12.36438 -12.18585 -12.03629 -11.91310 -11.66361 -11.05589 -10.94586 -10.77222 -10.75559 -10.61047 -10.26356 -9.84423 -9.18795 -5.07898 0.32548 0.65225 1.09129 1.27398 1.49686 1.61849 1.81360 1.90161 2.03188 2.12409 2.30149 3.11388 3.19924 3.24373 3.25176 3.38071 3.48250 3.53880 3.71688 3.75884 3.89751 3.98106 4.12423 4.16700 4.19375 4.31767 4.33439 4.41534 4.42154 4.60527 4.71834 4.73421 4.78143 4.83054 4.90398 5.00661 5.19576 5.25378 5.32092 5.43432 5.45820 5.62274 5.79088 5.87755 6.19441 6.34139 6.37233 7.07680 7.11831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.061 4.061 3 C -0.059 4.059 4 C 0.594 3.406 5 O -0.519 6.519 6 N -0.717 5.717 7 C 0.125 3.875 8 H 0.111 0.889 9 C -0.137 4.137 10 C -0.125 4.125 11 H 0.103 0.897 12 C 0.138 3.862 13 N -0.377 5.377 14 C 0.254 3.746 15 N -0.547 5.547 16 C 0.199 3.801 17 N -0.320 5.320 18 C -0.147 4.147 19 N -0.524 5.524 20 C 0.028 3.972 21 C -0.056 4.056 22 O -0.543 6.543 23 Si 0.721 3.279 24 C -0.201 4.201 25 H 0.071 0.929 26 H 0.065 0.935 27 H 0.081 0.919 28 H 0.395 0.605 29 H 0.079 0.921 30 H 0.103 0.897 31 H 0.092 0.908 32 H 0.105 0.895 33 H 0.218 0.782 34 H 0.217 0.783 35 H 0.096 0.904 36 H 0.072 0.928 37 H 0.416 0.584 38 H 0.115 0.885 39 H 0.383 0.617 40 H -0.253 1.253 41 H -0.252 1.252 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.291 0.396 0.986 1.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.070 4.070 3 C -0.172 4.172 4 C 0.383 3.617 5 O -0.394 6.394 6 N -0.368 5.368 7 C 0.019 3.981 8 H 0.129 0.871 9 C -0.176 4.176 10 C -0.144 4.144 11 H 0.121 0.879 12 C 0.016 3.984 13 N -0.168 5.168 14 C -0.043 4.043 15 N -0.274 5.274 16 C -0.104 4.104 17 N -0.148 5.148 18 C -0.185 4.185 19 N -0.121 5.121 20 C -0.090 4.090 21 C -0.166 4.166 22 O -0.349 6.349 23 Si 0.621 3.379 24 C -0.226 4.226 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.099 0.901 28 H 0.228 0.772 29 H 0.098 0.902 30 H 0.121 0.879 31 H 0.110 0.890 32 H 0.123 0.877 33 H 0.234 0.766 34 H 0.233 0.767 35 H 0.114 0.886 36 H 0.091 0.909 37 H 0.254 0.746 38 H 0.133 0.867 39 H 0.231 0.769 40 H -0.178 1.178 41 H -0.177 1.177 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.217 -0.250 2.032 2.058 hybrid contribution 1.056 1.002 0.349 1.497 sum 0.840 0.752 2.380 2.634 Atomic orbital electron populations 1.20399 0.88797 1.03242 1.02628 1.19945 0.96059 0.90305 1.00685 1.20182 0.83602 0.93384 1.19995 1.17015 0.85795 0.82932 0.75967 1.90842 1.15832 1.83103 1.49657 1.45554 1.09238 1.05592 1.76391 1.21759 0.99757 0.79715 0.96831 0.87119 1.23360 0.98128 1.00315 0.95751 1.22980 0.97931 0.96343 0.97117 0.87866 1.21918 0.97512 0.98418 0.80531 1.50557 1.23647 1.30402 1.12221 1.26118 0.99200 0.96187 0.82795 1.70573 1.07985 1.18447 1.30356 1.26049 0.98909 0.94441 0.90982 1.78006 1.03484 1.17747 1.15555 1.23542 0.95781 1.01089 0.98132 1.41849 1.07112 1.06609 1.56490 1.21116 0.96879 0.83294 1.07747 1.24983 0.91221 1.09071 0.91340 1.86503 1.41485 1.91275 1.15621 0.93979 0.82294 0.72835 0.88804 1.20616 0.90777 0.99128 1.12065 0.91082 0.91592 0.90066 0.77156 0.90236 0.87858 0.88984 0.87678 0.76564 0.76701 0.88598 0.90877 0.74640 0.86728 0.76863 1.17766 1.17652 0.83164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.15 9.83 36.00 0.35 0.21 16 2 C -0.06 -0.12 6.21 -104.16 -0.65 -0.77 16 3 C -0.06 -0.10 7.06 -81.98 -0.58 -0.67 16 4 C 0.59 1.32 7.79 -12.86 -0.10 1.22 16 5 O -0.52 -2.76 14.40 5.19 0.07 -2.69 16 6 N -0.72 0.65 5.26 -54.32 -0.29 0.36 16 7 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 8 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 9 C -0.14 0.55 7.39 -25.91 -0.19 0.36 16 10 C -0.12 0.39 3.76 -89.80 -0.34 0.05 16 11 H 0.10 -0.14 8.00 -51.93 -0.42 -0.56 16 12 C 0.14 -0.49 6.39 -4.04 -0.03 -0.51 16 13 N -0.38 0.07 3.69 -62.63 -0.23 -0.16 16 14 C 0.25 -0.05 12.63 -90.66 -1.14 -1.19 16 15 N -0.55 -1.51 11.19 -15.83 -0.18 -1.69 16 16 C 0.20 0.41 13.03 -91.81 -1.20 -0.79 16 17 N -0.32 -0.75 12.45 29.29 0.36 -0.38 16 18 C -0.15 0.33 7.43 -25.92 -0.19 0.13 16 19 N -0.52 0.30 5.99 -5.69 -0.03 0.26 16 20 C 0.03 -0.01 6.47 -81.95 -0.53 -0.54 16 21 C -0.06 0.08 3.08 36.00 0.11 0.19 16 22 O -0.54 0.64 12.88 -35.23 -0.45 0.18 16 23 Si 0.72 -1.54 30.54 -169.99 -5.19 -6.73 16 24 C -0.20 -0.06 9.27 -39.98 -0.37 -0.43 16 25 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 26 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 27 H 0.08 0.26 6.48 -51.93 -0.34 -0.08 16 28 H 0.39 -1.13 7.83 -40.82 -0.32 -1.45 16 29 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 30 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 31 H 0.09 -0.35 8.14 -51.93 -0.42 -0.78 16 32 H 0.11 -0.65 7.79 -51.93 -0.40 -1.05 16 33 H 0.22 -0.98 8.06 -52.48 -0.42 -1.40 16 34 H 0.22 -0.21 8.06 -52.49 -0.42 -0.63 16 35 H 0.10 -0.33 7.90 -51.93 -0.41 -0.74 16 36 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 37 H 0.42 -1.11 8.19 -40.82 -0.33 -1.44 16 38 H 0.12 -0.16 7.96 -51.93 -0.41 -0.58 16 39 H 0.38 -1.74 8.70 45.56 0.40 -1.35 16 40 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 41 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 42 H 0.15 -0.24 6.17 -52.49 -0.32 -0.57 16 LS Contribution 356.67 15.07 5.38 5.38 Total: 0.00 -10.91 356.67 -11.23 -22.14 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -5.53 Total: -13.44 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -5.14 Total: -3.24 kcal Atomic # 7 Polarization: -1.24 SS G_CDS: -0.36 Total: -1.60 kcal Atomic # 8 Polarization: -2.13 SS G_CDS: -0.38 Total: -2.50 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.19 Total: -6.73 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -10.91 -11.23 -22.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13940406.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.732 kcal (2) G-P(sol) polarization free energy of solvation -10.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.140 kcal (6) G-S(sol) free energy of system = (1) + (5) 97.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds