Wall clock time and date at job start Sun Mar 7 2021 04:41:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.34850 * 125.88961 * 245.02400 * 4 2 1 6 6 C 1.40893 * 107.41607 * 179.97438 * 5 4 2 7 7 C 1.34851 * 107.41688 * 0.02562 * 6 5 4 8 8 C 1.50700 * 125.88856 * 180.02562 * 7 6 5 9 9 C 1.50704 * 109.46901 * 84.98103 * 8 7 6 10 10 O 1.21284 * 119.99950 * 359.97438 * 9 8 7 11 11 N 1.34780 * 119.99832 * 180.02562 * 9 8 7 12 12 C 1.46500 * 119.99797 * 179.97438 * 11 9 8 13 13 H 1.09006 * 112.84813 * 336.19703 * 12 11 9 14 14 C 1.53778 * 113.61681 * 107.49959 * 12 11 9 15 15 C 1.53777 * 87.07879 * 89.11610 * 14 12 11 16 16 H 1.09004 * 113.61589 * 270.88205 * 15 14 12 17 17 C 1.52999 * 113.69098 * 139.99720 * 15 14 12 18 18 N 1.46500 * 109.47779 * 87.45985 * 17 15 14 19 19 C 1.34424 * 126.82460 * 124.70415 * 18 17 15 20 20 N 1.30836 * 108.07752 * 179.90085 * 19 18 17 21 21 C 1.33236 * 109.82996 * 0.38534 * 20 19 18 22 22 N 1.30714 * 108.94653 * 359.76358 * 21 20 19 23 23 C 1.53778 * 113.61578 * 205.00032 * 12 11 9 24 24 N 1.36342 * 125.89041 * 64.71339 * 4 2 1 25 25 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 26 26 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 27 27 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 28 28 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 29 29 H 1.07999 * 126.29153 * 0.02562 * 5 4 2 30 30 H 1.07999 * 126.29068 * 180.02562 * 6 5 4 31 31 H 1.09002 * 109.46981 * 204.97791 * 8 7 6 32 32 H 1.08999 * 109.47863 * 324.98005 * 8 7 6 33 33 H 0.96988 * 120.00221 * 359.97438 * 11 9 8 34 34 H 1.08999 * 113.61479 * 203.66535 * 14 12 11 35 35 H 1.09000 * 113.61471 * 334.56753 * 14 12 11 36 36 H 1.08998 * 109.47255 * 207.46383 * 17 15 14 37 37 H 1.09006 * 109.46771 * 327.46287 * 17 15 14 38 38 H 1.08003 * 125.96201 * 0.05415 * 19 18 17 39 39 H 1.07997 * 125.52613 * 179.79784 * 21 20 19 40 40 H 1.08996 * 113.61490 * 25.42728 * 23 12 11 41 41 H 1.08994 * 113.61568 * 156.33608 * 23 12 11 42 42 H 0.96997 * 125.63709 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6297 -0.1486 2.2379 6 6 2.8970 -1.1603 3.1813 7 6 2.3521 -2.3020 2.7142 8 6 2.3922 -3.6443 3.3979 9 6 1.2597 -3.7378 4.3878 10 8 0.4957 -2.8059 4.5249 11 7 1.0966 -4.8566 5.1214 12 6 -0.0039 -4.9473 6.0841 13 1 -0.3525 -3.9712 6.4217 14 6 -1.1363 -5.8875 5.6386 15 6 -0.3634 -7.0201 6.3347 16 1 0.3571 -7.5194 5.6869 17 6 -1.2603 -8.0010 7.0926 18 7 -1.7084 -9.0571 6.1816 19 6 -1.5604 -10.3825 6.3497 20 7 -2.0955 -10.9848 5.3188 21 6 -2.5854 -10.0809 4.4714 22 7 -2.3725 -8.8857 4.9559 23 6 0.2606 -5.9373 7.2308 24 7 1.7529 -2.0308 1.5199 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5139 -0.8900 27 1 1.5879 2.4585 -1.2243 28 1 1.5615 2.4679 1.2085 29 1 2.9285 0.8868 2.3090 30 1 3.4386 -1.0430 4.1083 31 1 2.2904 -4.4343 2.6537 32 1 3.3419 -3.7578 3.9206 33 1 1.7078 -5.6017 5.0120 34 1 -2.0969 -5.6647 6.1030 35 1 -1.2052 -6.0062 4.5573 36 1 -0.6996 -8.4446 7.9154 37 1 -2.1266 -7.4702 7.4877 38 1 -1.0851 -10.8660 7.1904 39 1 -3.0791 -10.3002 3.5362 40 1 1.3194 -6.0963 7.4348 41 1 -0.3182 -5.7282 8.1304 42 1 1.2803 -2.6719 0.9663 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:37 Heat of formation + Delta-G solvation = 103.846574 kcal Electronic energy + Delta-G solvation = -25541.297743 eV Core-core repulsion = 21719.914894 eV Total energy + Delta-G solvation = -3821.382849 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.00950 -42.23722 -41.22398 -39.43727 -37.75353 -35.45211 -34.01477 -32.95181 -32.14322 -31.81116 -29.76473 -28.86018 -26.90072 -25.35384 -24.43348 -22.91283 -22.49992 -22.20117 -21.20644 -20.92907 -20.43716 -18.56824 -18.52104 -18.13440 -18.01414 -17.05304 -16.85338 -16.34169 -16.18373 -15.90402 -15.57998 -15.43012 -15.04255 -14.96916 -14.82202 -14.51666 -14.28707 -14.17438 -13.88692 -13.75757 -13.54760 -13.26994 -13.16556 -12.98133 -12.83337 -12.40085 -12.37228 -11.81684 -11.80059 -11.44355 -10.94148 -10.88134 -10.74720 -10.63159 -10.56214 -10.10007 -9.65471 -8.84390 -4.87605 0.66699 1.13122 1.29537 1.34118 1.62589 1.66310 1.90828 2.03917 2.05553 2.28064 2.53106 3.08291 3.26778 3.37742 3.38324 3.44027 3.59603 3.64872 3.83287 3.92789 3.95199 3.95969 3.96869 4.04075 4.20235 4.27398 4.36121 4.37702 4.49081 4.54843 4.64741 4.69973 4.81696 4.88993 4.97597 5.00327 5.27831 5.36659 5.42925 5.47355 5.50095 5.80100 6.12288 6.25527 6.39941 6.43094 6.71338 7.13140 7.22057 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.056 4.056 3 Si 0.712 3.288 4 C 0.037 3.963 5 C -0.184 4.184 6 C -0.172 4.172 7 C 0.035 3.965 8 C -0.071 4.071 9 C 0.513 3.487 10 O -0.517 6.517 11 N -0.717 5.717 12 C 0.119 3.881 13 H 0.106 0.894 14 C -0.135 4.135 15 C -0.122 4.122 16 H 0.095 0.905 17 C 0.137 3.863 18 N -0.378 5.378 19 C 0.251 3.749 20 N -0.547 5.547 21 C 0.196 3.804 22 N -0.312 5.312 23 C -0.136 4.136 24 N -0.536 5.536 25 H 0.380 0.620 26 H 0.071 0.929 27 H -0.262 1.262 28 H -0.252 1.252 29 H 0.142 0.858 30 H 0.138 0.862 31 H 0.099 0.901 32 H 0.118 0.882 33 H 0.400 0.600 34 H 0.092 0.908 35 H 0.074 0.926 36 H 0.105 0.895 37 H 0.092 0.908 38 H 0.218 0.782 39 H 0.216 0.784 40 H 0.080 0.920 41 H 0.101 0.899 42 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.660 -2.753 1.383 6.444 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.165 4.165 3 Si 0.611 3.389 4 C -0.076 4.076 5 C -0.208 4.208 6 C -0.196 4.196 7 C -0.078 4.078 8 C -0.111 4.111 9 C 0.299 3.701 10 O -0.391 6.391 11 N -0.369 5.369 12 C 0.014 3.986 13 H 0.124 0.876 14 C -0.173 4.173 15 C -0.141 4.141 16 H 0.113 0.887 17 C 0.015 3.985 18 N -0.169 5.169 19 C -0.046 4.046 20 N -0.274 5.274 21 C -0.107 4.107 22 N -0.140 5.140 23 C -0.175 4.175 24 N -0.131 5.131 25 H 0.228 0.772 26 H 0.089 0.911 27 H -0.187 1.187 28 H -0.176 1.176 29 H 0.159 0.841 30 H 0.155 0.845 31 H 0.118 0.882 32 H 0.136 0.864 33 H 0.234 0.766 34 H 0.110 0.890 35 H 0.093 0.907 36 H 0.123 0.877 37 H 0.111 0.889 38 H 0.234 0.766 39 H 0.232 0.768 40 H 0.098 0.902 41 H 0.119 0.881 42 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 4.679 -1.251 1.598 5.100 hybrid contribution -1.036 -1.136 -0.589 1.647 sum 3.643 -2.387 1.009 4.471 Atomic orbital electron populations 1.86632 1.18041 1.80301 1.49820 1.24507 0.84311 1.11504 0.96186 0.94496 0.91438 0.72772 0.80200 1.19557 1.05667 0.83869 0.98538 1.20613 1.05961 0.99528 0.94742 1.20565 1.06799 0.91527 1.00739 1.19432 1.03788 0.95858 0.88731 1.20121 0.99119 0.94470 0.97428 1.20643 0.86053 0.82064 0.81386 1.90792 1.45029 1.37184 1.66132 1.45659 1.31801 1.18115 1.41330 1.21807 0.87709 0.99866 0.89249 0.87600 1.23407 0.97807 0.94198 1.01930 1.22899 0.98232 0.94479 0.98486 0.88718 1.21931 0.98993 0.87631 0.89959 1.50603 1.42973 1.06853 1.16514 1.26132 0.97635 0.81758 0.99051 1.70564 1.18421 1.34475 1.03933 1.26069 0.98799 0.85529 1.00334 1.78099 1.17064 1.23325 0.95513 1.23347 1.02121 0.94541 0.97487 1.41762 1.43713 1.09329 1.18259 0.77185 0.91105 1.18744 1.17609 0.84064 0.84459 0.88246 0.86368 0.76556 0.88955 0.90702 0.87728 0.88931 0.76568 0.76778 0.90151 0.88086 0.75214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.40 12.86 -35.23 -0.45 -1.85 16 2 C -0.06 -0.06 3.07 36.01 0.11 0.05 16 3 Si 0.71 -0.03 30.60 -169.99 -5.20 -5.23 16 4 C 0.04 0.11 6.53 -81.79 -0.53 -0.42 16 5 C -0.18 -0.59 9.37 -39.78 -0.37 -0.96 16 6 C -0.17 -0.52 10.76 -39.78 -0.43 -0.95 16 7 C 0.04 0.07 5.66 -81.79 -0.46 -0.39 16 8 C -0.07 0.09 6.24 -29.03 -0.18 -0.09 16 9 C 0.51 0.67 7.82 -10.98 -0.09 0.59 16 10 O -0.52 -3.36 15.63 5.55 0.09 -3.27 16 11 N -0.72 1.14 5.26 -53.01 -0.28 0.86 16 12 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 13 H 0.11 0.11 7.46 -51.93 -0.39 -0.28 16 14 C -0.13 0.12 7.43 -25.92 -0.19 -0.07 16 15 C -0.12 0.39 3.72 -89.81 -0.33 0.06 16 16 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 17 C 0.14 -0.48 6.39 -4.04 -0.03 -0.50 16 18 N -0.38 0.09 3.69 -62.63 -0.23 -0.14 16 19 C 0.25 -0.10 12.63 -90.66 -1.14 -1.24 16 20 N -0.55 -1.44 11.19 -15.83 -0.18 -1.61 16 21 C 0.20 0.41 13.03 -91.82 -1.20 -0.79 16 22 N -0.31 -0.76 12.57 29.29 0.37 -0.39 16 23 C -0.14 0.56 7.39 -25.92 -0.19 0.37 16 24 N -0.54 -1.25 6.07 -5.44 -0.03 -1.28 16 25 H 0.38 -0.66 8.74 45.56 0.40 -0.26 16 26 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 27 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 28 H -0.25 -0.90 7.11 56.52 0.40 -0.50 16 29 H 0.14 0.22 6.24 -52.49 -0.33 -0.11 16 30 H 0.14 0.21 8.06 -52.49 -0.42 -0.21 16 31 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 33 H 0.40 -1.74 8.70 -40.82 -0.36 -2.09 16 34 H 0.09 -0.06 7.90 -51.93 -0.41 -0.48 16 35 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 36 H 0.10 -0.66 8.09 -51.93 -0.42 -1.08 16 37 H 0.09 -0.33 7.85 -51.93 -0.41 -0.73 16 38 H 0.22 -1.05 8.06 -52.48 -0.42 -1.47 16 39 H 0.22 -0.17 8.06 -52.49 -0.42 -0.60 16 40 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 41 H 0.10 -0.50 8.10 -51.93 -0.42 -0.92 16 42 H 0.41 0.23 8.96 -40.82 -0.37 -0.14 16 LS Contribution 361.36 15.07 5.45 5.45 Total: 0.00 -13.56 361.36 -11.49 -25.06 By element: Atomic # 1 Polarization: -7.10 SS G_CDS: -5.69 Total: -12.79 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: -5.33 Total: -4.79 kcal Atomic # 7 Polarization: -2.22 SS G_CDS: -0.35 Total: -2.57 kcal Atomic # 8 Polarization: -4.76 SS G_CDS: -0.37 Total: -5.13 kcal Atomic # 14 Polarization: -0.03 SS G_CDS: -5.20 Total: -5.23 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -13.56 -11.49 -25.06 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 128.903 kcal (2) G-P(sol) polarization free energy of solvation -13.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.341 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.056 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds