Wall clock time and date at job start Sun Mar 7 2021 04:41:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86299 * 109.47168 * 2 1 4 4 C 1.50701 * 109.47145 * 119.99794 * 2 1 3 5 5 C 1.34492 * 125.49633 * 210.28760 * 4 2 1 6 6 C 1.46743 * 106.36957 * 180.12419 * 5 4 2 7 7 C 1.47266 * 126.97084 * 179.88378 * 6 5 4 8 8 O 1.21625 * 119.99617 * 179.68727 * 7 6 5 9 9 N 1.34766 * 120.00115 * 359.68729 * 7 6 5 10 10 C 1.46500 * 120.00277 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.84624 * 23.79715 * 10 9 7 12 12 C 1.53782 * 113.61918 * 155.00092 * 10 9 7 13 13 C 1.53781 * 87.08224 * 89.11528 * 12 10 9 14 14 H 1.09006 * 113.61315 * 270.80477 * 13 12 10 15 15 C 1.52997 * 113.61559 * 139.98357 * 13 12 10 16 16 N 1.46505 * 109.47212 * 174.99892 * 15 13 12 17 17 C 1.34430 * 126.82083 * 124.99774 * 16 15 13 18 18 N 1.30833 * 108.07734 * 179.97438 * 17 16 15 19 19 C 1.33243 * 109.82413 * 359.97438 * 18 17 16 20 20 N 1.30715 * 108.94993 * 359.75621 * 19 18 17 21 21 C 1.53782 * 113.61297 * 252.50012 * 10 9 7 22 22 C 1.36337 * 106.06007 * 359.62496 * 6 5 4 23 23 C 1.50998 * 126.79255 * 180.25664 * 22 6 5 24 24 C 1.53404 * 108.24583 * 164.27843 * 23 22 6 25 25 C 1.53160 * 109.04230 * 48.48029 * 24 23 22 26 26 C 1.53131 * 109.52144 * 290.41794 * 25 24 23 27 27 N 1.35213 * 108.66155 * 0.23773 * 22 6 5 28 28 H 0.96697 * 113.99741 * 300.00166 * 1 2 3 29 29 H 1.09002 * 109.46986 * 239.99822 * 2 1 3 30 30 H 1.48508 * 109.99961 * 299.99946 * 3 2 1 31 31 H 1.48497 * 109.99857 * 61.31650 * 3 2 1 32 32 H 1.08007 * 126.81746 * 0.02562 * 5 4 2 33 33 H 0.97002 * 120.00466 * 359.97438 * 9 7 6 34 34 H 1.09003 * 113.61213 * 334.56934 * 12 10 9 35 35 H 1.08992 * 113.69083 * 203.67515 * 12 10 9 36 36 H 1.09002 * 109.47153 * 54.99884 * 15 13 12 37 37 H 1.09001 * 109.46832 * 295.00075 * 15 13 12 38 38 H 1.08004 * 125.96151 * 359.93062 * 17 16 15 39 39 H 1.08001 * 125.52120 * 179.97438 * 19 18 17 40 40 H 1.08998 * 113.61542 * 156.33246 * 21 10 9 41 41 H 1.08998 * 113.61766 * 25.42955 * 21 10 9 42 42 H 1.09000 * 109.71040 * 283.98992 * 23 22 6 43 43 H 1.08999 * 109.70206 * 44.61518 * 23 22 6 44 44 H 1.08997 * 109.55361 * 288.60465 * 24 23 22 45 45 H 1.09005 * 109.60651 * 168.38690 * 24 23 22 46 46 H 1.08996 * 109.46005 * 170.40413 * 25 24 23 47 47 H 1.09000 * 109.46033 * 50.43318 * 25 24 23 48 48 H 1.08995 * 109.56682 * 291.17459 * 26 25 24 49 49 H 1.09001 * 109.65743 * 170.89085 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 3.0831 -0.4426 1.8713 6 6 3.1553 -1.3774 3.0002 7 6 4.2331 -1.4789 3.9985 8 8 4.1599 -2.3022 4.8908 9 7 5.3005 -0.6596 3.9234 10 6 6.3730 -0.7609 4.9162 11 1 6.4218 -1.7424 5.3879 12 6 7.7328 -0.2531 4.4083 13 6 7.3171 1.1359 4.9208 14 1 6.7784 1.7304 4.1828 15 6 8.4557 1.9085 5.5896 16 7 7.9953 3.2559 5.9343 17 6 8.0330 3.8345 7.1472 18 7 7.5304 5.0376 7.0388 19 6 7.1631 5.2620 5.7778 20 7 7.4329 4.2020 5.0621 21 6 6.3990 0.4071 5.9163 22 6 2.0193 -2.1289 2.9408 23 6 1.6152 -3.2335 3.8877 24 6 0.1221 -3.5196 3.6825 25 6 -0.1566 -3.6702 2.1841 26 6 -0.0053 -2.3104 1.4963 27 7 1.2885 -1.7251 1.8772 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8900 30 1 1.5615 2.4679 -1.2086 31 1 1.5879 2.4585 1.2242 32 1 3.8113 0.3098 1.6065 33 1 5.3591 -0.0032 3.2116 34 1 7.8410 -0.3044 3.3248 35 1 8.5849 -0.6774 4.9393 36 1 9.3000 1.9775 4.9037 37 1 8.7653 1.3874 6.4956 38 1 8.4115 3.3845 8.0531 39 1 6.7182 6.1734 5.4066 40 1 6.8856 0.1627 6.8605 41 1 5.4305 0.8888 6.0504 42 1 2.1947 -4.1316 3.6737 43 1 1.7908 -2.9184 4.9162 44 1 -0.4659 -2.6931 4.0815 45 1 -0.1479 -4.4414 4.1980 46 1 -1.1717 -4.0396 2.0388 47 1 0.5521 -4.3766 1.7520 48 1 -0.8121 -1.6494 1.8127 49 1 -0.0428 -2.4403 0.4147 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_16915396.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:49 Heat of formation + Delta-G solvation = 94.574848 kcal Electronic energy + Delta-G solvation = -32071.492290 eV Core-core repulsion = 27810.406010 eV Total energy + Delta-G solvation = -4261.086280 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.179 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.94532 -42.78842 -41.04611 -39.15396 -38.13278 -36.93338 -35.32673 -33.77121 -33.39819 -32.07907 -31.20884 -29.76577 -28.85154 -26.84435 -26.67461 -24.93463 -24.69148 -23.69706 -22.90382 -22.34878 -21.75865 -21.24642 -20.20207 -19.62738 -19.00196 -18.30615 -17.37745 -17.08845 -17.00702 -16.76016 -16.58092 -15.97133 -15.96157 -15.76136 -15.57121 -15.42579 -15.29868 -15.15502 -15.03821 -14.96939 -14.63285 -14.48460 -14.31472 -13.92736 -13.82730 -13.58095 -13.31138 -13.22441 -12.79601 -12.75213 -12.43947 -12.23265 -12.17394 -12.08812 -11.92468 -11.81182 -11.74019 -11.49284 -10.96850 -10.86984 -10.69996 -10.67408 -10.50476 -9.96533 -9.56661 -9.01607 -5.03593 0.73307 0.83129 0.98220 1.36374 1.40271 1.58633 1.71831 1.96573 2.10414 2.38727 2.66516 3.07237 3.26631 3.36287 3.38989 3.40894 3.45871 3.49430 3.59938 3.72344 3.74450 3.75022 3.87910 4.01074 4.08695 4.14865 4.18935 4.29036 4.31444 4.35591 4.40620 4.44467 4.53154 4.56133 4.59885 4.64952 4.70337 4.77416 4.79380 4.87544 4.92028 4.95134 5.01872 5.10037 5.13185 5.20346 5.33581 5.53555 5.65662 5.74378 5.87300 6.01002 6.19749 6.21551 6.70452 7.19408 7.48348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.050 4.050 3 Si 0.709 3.291 4 C -0.011 4.011 5 C -0.162 4.162 6 C -0.236 4.236 7 C 0.598 3.402 8 O -0.547 6.547 9 N -0.711 5.711 10 C 0.127 3.873 11 H 0.106 0.894 12 C -0.137 4.137 13 C -0.124 4.124 14 H 0.106 0.894 15 C 0.138 3.862 16 N -0.376 5.376 17 C 0.253 3.747 18 N -0.548 5.548 19 C 0.197 3.803 20 N -0.317 5.317 21 C -0.149 4.149 22 C 0.122 3.878 23 C -0.056 4.056 24 C -0.129 4.129 25 C -0.139 4.139 26 C 0.107 3.893 27 N -0.428 5.428 28 H 0.376 0.624 29 H 0.121 0.879 30 H -0.254 1.254 31 H -0.257 1.257 32 H 0.152 0.848 33 H 0.401 0.599 34 H 0.081 0.919 35 H 0.099 0.901 36 H 0.092 0.908 37 H 0.104 0.896 38 H 0.217 0.783 39 H 0.216 0.784 40 H 0.092 0.908 41 H 0.071 0.929 42 H 0.089 0.911 43 H 0.100 0.900 44 H 0.068 0.932 45 H 0.080 0.920 46 H 0.088 0.912 47 H 0.075 0.925 48 H 0.082 0.918 49 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.721 -2.043 -1.522 3.075 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.160 4.160 3 Si 0.608 3.392 4 C -0.120 4.120 5 C -0.186 4.186 6 C -0.245 4.245 7 C 0.388 3.612 8 O -0.426 6.426 9 N -0.362 5.362 10 C 0.021 3.979 11 H 0.124 0.876 12 C -0.176 4.176 13 C -0.143 4.143 14 H 0.124 0.876 15 C 0.016 3.984 16 N -0.167 5.167 17 C -0.044 4.044 18 N -0.275 5.275 19 C -0.106 4.106 20 N -0.145 5.145 21 C -0.187 4.187 22 C 0.004 3.996 23 C -0.093 4.093 24 C -0.167 4.167 25 C -0.177 4.177 26 C -0.013 4.013 27 N -0.104 5.104 28 H 0.224 0.776 29 H 0.139 0.861 30 H -0.178 1.178 31 H -0.181 1.181 32 H 0.170 0.830 33 H 0.236 0.764 34 H 0.099 0.901 35 H 0.118 0.882 36 H 0.110 0.890 37 H 0.122 0.878 38 H 0.234 0.766 39 H 0.232 0.768 40 H 0.110 0.890 41 H 0.090 0.910 42 H 0.107 0.893 43 H 0.118 0.882 44 H 0.086 0.914 45 H 0.099 0.901 46 H 0.107 0.893 47 H 0.094 0.906 48 H 0.100 0.900 49 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.053 -2.128 -2.105 3.173 hybrid contribution -0.907 0.074 0.232 0.939 sum 0.147 -2.054 -1.872 2.783 Atomic orbital electron populations 1.86584 1.17880 1.79805 1.49679 1.24813 0.83600 1.11048 0.96495 0.94566 0.91370 0.72627 0.80673 1.20673 0.96233 0.95684 0.99406 1.21635 0.97923 1.02418 0.96610 1.19791 0.98081 1.04908 1.01717 1.17294 0.80737 0.79754 0.83428 1.90766 1.78779 1.37026 1.36039 1.45403 1.20646 1.38965 1.31177 1.21687 0.86469 0.99876 0.89895 0.87554 1.23348 0.97378 0.94441 1.02408 1.22981 0.96540 0.95376 0.99412 0.87616 1.21940 0.97362 0.77004 1.02119 1.50568 1.45895 1.13405 1.06810 1.26095 0.97101 0.90114 0.91107 1.70563 1.20165 1.15868 1.20906 1.26034 0.98730 0.98202 0.87586 1.78008 1.19340 1.00095 1.17102 1.23548 1.00507 0.96995 0.97680 1.20388 0.91233 0.97753 0.90243 1.20522 0.95369 0.95129 0.98314 1.21728 0.96233 1.03076 0.95641 1.21942 1.03729 0.95840 0.96175 1.22116 0.82622 0.95022 1.01546 1.43863 1.17598 1.27292 1.21659 0.77602 0.86122 1.17843 1.18092 0.83031 0.76409 0.90053 0.88212 0.88992 0.87820 0.76648 0.76773 0.88983 0.90971 0.89275 0.88195 0.91362 0.90135 0.89302 0.90615 0.89966 0.88504 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.19 10.68 -35.23 -0.38 -0.18 16 2 C -0.05 0.05 2.99 36.01 0.11 0.16 16 3 Si 0.71 -1.12 31.10 -169.99 -5.29 -6.41 16 4 C -0.01 0.00 6.15 -81.87 -0.50 -0.51 16 5 C -0.16 -0.03 9.08 -37.47 -0.34 -0.37 16 6 C -0.24 -0.57 6.28 -103.48 -0.65 -1.22 16 7 C 0.60 1.88 7.81 -12.60 -0.10 1.78 16 8 O -0.55 -3.36 14.93 5.26 0.08 -3.28 16 9 N -0.71 -0.01 5.26 -54.14 -0.28 -0.30 16 10 C 0.13 -0.12 4.32 -67.12 -0.29 -0.41 16 11 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 12 C -0.14 0.49 7.39 -25.92 -0.19 0.30 16 13 C -0.12 0.34 3.76 -89.81 -0.34 0.00 16 14 H 0.11 -0.12 8.01 -51.93 -0.42 -0.54 16 15 C 0.14 -0.44 6.39 -4.04 -0.03 -0.47 16 16 N -0.38 -0.02 3.69 -62.62 -0.23 -0.25 16 17 C 0.25 0.02 12.63 -90.65 -1.14 -1.12 16 18 N -0.55 -1.64 11.19 -15.83 -0.18 -1.82 16 19 C 0.20 0.44 13.03 -91.81 -1.20 -0.76 16 20 N -0.32 -0.77 12.46 29.29 0.37 -0.41 16 21 C -0.15 0.23 7.43 -25.92 -0.19 0.04 16 22 C 0.12 0.27 6.57 -81.64 -0.54 -0.27 16 23 C -0.06 -0.07 5.32 -27.53 -0.15 -0.21 16 24 C -0.13 0.13 5.98 -26.44 -0.16 -0.03 16 25 C -0.14 0.25 5.92 -26.58 -0.16 0.09 16 26 C 0.11 -0.12 5.32 -3.69 -0.02 -0.14 16 27 N -0.43 -0.36 3.11 -107.37 -0.33 -0.69 16 28 H 0.38 -0.92 8.63 45.56 0.39 -0.53 16 29 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 30 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 31 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 32 H 0.15 -0.44 6.51 -52.48 -0.34 -0.78 16 33 H 0.40 -0.80 7.83 -40.82 -0.32 -1.11 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.10 -0.49 8.10 -51.93 -0.42 -0.91 16 36 H 0.09 -0.34 8.14 -51.93 -0.42 -0.76 16 37 H 0.10 -0.60 7.79 -51.93 -0.40 -1.00 16 38 H 0.22 -0.90 8.06 -52.48 -0.42 -1.33 16 39 H 0.22 -0.18 8.06 -52.49 -0.42 -0.60 16 40 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 41 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 42 H 0.09 0.12 8.14 -51.93 -0.42 -0.30 16 43 H 0.10 0.24 7.40 -51.93 -0.38 -0.14 16 44 H 0.07 -0.05 8.12 -51.93 -0.42 -0.47 16 45 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 46 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 47 H 0.08 -0.09 8.11 -51.93 -0.42 -0.51 16 48 H 0.08 -0.16 7.94 -51.93 -0.41 -0.57 16 49 H 0.10 -0.10 7.69 -51.93 -0.40 -0.50 16 LS Contribution 397.43 15.07 5.99 5.99 Total: 0.00 -10.92 397.43 -13.48 -24.40 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -7.34 Total: -13.92 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: -5.88 Total: -3.13 kcal Atomic # 7 Polarization: -2.81 SS G_CDS: -0.66 Total: -3.47 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.30 Total: -3.46 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.29 Total: -6.41 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -10.92 -13.48 -24.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_16915396.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.971 kcal (2) G-P(sol) polarization free energy of solvation -10.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.396 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds