Wall clock time and date at job start Sun Mar 7 2021 04:41:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47008 * 2 1 4 4 C 1.50705 * 109.46783 * 240.00640 * 2 1 3 5 5 C 1.38715 * 120.02514 * 284.99384 * 4 2 1 6 6 O 1.35898 * 120.05279 * 359.74826 * 5 4 2 7 7 C 1.42902 * 116.99730 * 179.97438 * 6 5 4 8 8 C 1.50702 * 109.47390 * 180.02562 * 7 6 5 9 9 O 1.21281 * 119.99695 * 0.02562 * 8 7 6 10 10 N 1.34770 * 120.00039 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99637 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85042 * 334.66303 * 11 10 8 13 13 C 1.53790 * 113.61391 * 105.86178 * 11 10 8 14 14 C 1.54055 * 86.98276 * 89.15879 * 13 11 10 15 15 H 1.08996 * 113.61272 * 270.87859 * 14 13 11 16 16 C 1.53000 * 113.61651 * 139.97999 * 14 13 11 17 17 N 1.46503 * 109.47290 * 87.49915 * 16 14 13 18 18 C 1.34434 * 126.81995 * 124.70674 * 17 16 14 19 19 N 1.30833 * 108.07560 * 179.89668 * 18 17 16 20 20 C 1.33243 * 109.82792 * 0.38526 * 19 18 17 21 21 N 1.30710 * 108.94862 * 359.76077 * 20 19 18 22 22 C 1.53773 * 87.07981 * 25.43255 * 14 13 11 23 23 C 1.38755 * 119.88882 * 179.72734 * 5 4 2 24 24 C 1.38117 * 119.94118 * 0.02562 * 23 5 4 25 25 C 1.38289 * 120.05983 * 0.02562 * 24 23 5 26 26 C 1.38166 * 120.02903 * 104.72469 * 4 2 1 27 27 H 0.96697 * 114.00041 * 300.00095 * 1 2 3 28 28 H 1.08994 * 109.47320 * 120.00223 * 2 1 3 29 29 H 1.48497 * 110.00255 * 178.68394 * 3 2 1 30 30 H 1.48502 * 110.00523 * 300.00262 * 3 2 1 31 31 H 1.09000 * 109.47521 * 300.00502 * 7 6 5 32 32 H 1.09007 * 109.47162 * 60.00566 * 7 6 5 33 33 H 0.96998 * 120.00284 * 359.97438 * 10 8 7 34 34 H 1.08992 * 113.61136 * 203.66464 * 13 11 10 35 35 H 1.09001 * 113.61350 * 334.56604 * 13 11 10 36 36 H 1.08997 * 109.47103 * 207.50362 * 16 14 13 37 37 H 1.09009 * 109.47262 * 327.50444 * 16 14 13 38 38 H 1.07998 * 125.96055 * 0.04439 * 18 17 16 39 39 H 1.07996 * 125.52294 * 179.80384 * 20 19 18 40 40 H 1.08998 * 113.61514 * 220.02482 * 22 14 13 41 41 H 1.08995 * 113.69570 * 89.12697 * 22 14 13 42 42 H 1.07995 * 120.02466 * 179.97438 * 23 5 4 43 43 H 1.08000 * 119.97105 * 179.97438 * 24 23 5 44 44 H 1.08000 * 119.94758 * 180.02562 * 25 24 23 45 45 H 1.08001 * 119.97380 * 0.26819 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.8697 -2.0940 -1.3071 6 8 1.3612 -2.8109 -0.2707 7 6 1.3282 -4.2318 -0.4192 8 6 0.7361 -4.8529 0.8197 9 8 0.3771 -4.1480 1.7391 10 7 0.6054 -6.1914 0.9059 11 6 0.0292 -6.7950 2.1101 12 1 0.1504 -6.1713 2.9957 13 6 -1.4052 -7.3136 1.9133 14 6 -0.7753 -8.6509 1.4797 15 1 -0.5666 -8.7092 0.4115 16 6 -1.5188 -9.8789 2.0091 17 7 -2.5884 -10.2419 1.0761 18 6 -2.7743 -11.4369 0.4890 19 7 -3.8373 -11.3557 -0.2694 20 6 -4.3498 -10.1278 -0.1992 21 7 -3.6198 -9.4089 0.6124 22 6 0.4475 -8.2591 2.3258 23 6 2.3277 -2.7447 -2.4438 24 6 2.8441 -2.0136 -3.4957 25 6 2.9055 -0.6344 -3.4166 26 6 2.4484 0.0164 -2.2858 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5138 0.8899 29 1 3.5346 1.7704 0.0320 30 1 1.5615 2.4680 -1.2084 31 1 0.7175 -4.4928 -1.2835 32 1 2.3419 -4.6056 -0.5644 33 1 0.8921 -6.7551 0.1705 34 1 -1.9763 -7.3798 2.8393 35 1 -1.9475 -6.8058 1.1157 36 1 -0.8224 -10.7118 2.1053 37 1 -1.9493 -9.6506 2.9842 38 1 -2.1555 -12.3120 0.6222 39 1 -5.2268 -9.7828 -0.7267 40 1 1.3999 -8.5140 1.8611 41 1 0.3833 -8.5830 3.3646 42 1 2.2811 -3.8219 -2.5056 43 1 3.2012 -2.5197 -4.3805 44 1 3.3093 -0.0645 -4.2403 45 1 2.4966 1.0938 -2.2267 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_2989392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:41:54 Heat of formation + Delta-G solvation = 59.069155 kcal Electronic energy + Delta-G solvation = -29099.037977 eV Core-core repulsion = 24894.231011 eV Total energy + Delta-G solvation = -4204.806965 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.01169 -41.71752 -41.12974 -39.64686 -38.31945 -37.34005 -35.51669 -34.02967 -32.87424 -32.14551 -31.35424 -29.92387 -28.70532 -26.94633 -26.57227 -24.81928 -23.65722 -22.91634 -22.50732 -22.46079 -21.89970 -20.53368 -19.35339 -18.56985 -18.25471 -18.17239 -17.49027 -17.33833 -16.97488 -16.82178 -16.79003 -16.20333 -15.80523 -15.68155 -15.56094 -15.26180 -15.20764 -14.96818 -14.78643 -14.64448 -14.23434 -13.97334 -13.77817 -13.68953 -13.54245 -13.19593 -12.97812 -12.95099 -12.69554 -12.42296 -12.21072 -11.87858 -11.85652 -11.70807 -11.48279 -10.94974 -10.93148 -10.75000 -10.64074 -10.22690 -10.11637 -10.01735 -9.23818 -4.90714 0.17542 0.37561 0.66420 1.28692 1.37170 1.37431 1.43579 1.70009 2.01489 2.03997 2.48377 2.62692 3.04870 3.20928 3.37285 3.38921 3.41004 3.51813 3.57199 3.70360 3.78413 3.79659 3.87956 3.90546 3.91254 3.95790 4.08770 4.16536 4.22157 4.29413 4.36246 4.43716 4.45931 4.51225 4.59844 4.61793 4.76373 4.91185 4.93374 4.97427 5.21537 5.27092 5.30059 5.38791 5.43985 5.47412 5.63962 5.79648 6.17461 6.32566 6.82948 7.03977 7.13095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.102 4.102 5 C 0.153 3.847 6 O -0.277 6.277 7 C 0.039 3.961 8 C 0.520 3.480 9 O -0.506 6.506 10 N -0.712 5.712 11 C 0.121 3.879 12 H 0.108 0.892 13 C -0.135 4.135 14 C -0.123 4.123 15 H 0.095 0.905 16 C 0.137 3.863 17 N -0.379 5.379 18 C 0.251 3.749 19 N -0.547 5.547 20 C 0.196 3.804 21 N -0.312 5.312 22 C -0.135 4.135 23 C -0.211 4.211 24 C -0.072 4.072 25 C -0.151 4.151 26 C -0.084 4.084 27 H 0.380 0.620 28 H 0.074 0.926 29 H -0.255 1.255 30 H -0.250 1.250 31 H 0.094 0.906 32 H 0.094 0.906 33 H 0.401 0.599 34 H 0.094 0.906 35 H 0.077 0.923 36 H 0.104 0.896 37 H 0.093 0.907 38 H 0.218 0.782 39 H 0.216 0.784 40 H 0.080 0.920 41 H 0.103 0.897 42 H 0.131 0.869 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.280 -3.724 1.269 5.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.103 4.103 5 C 0.107 3.893 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.305 3.695 9 O -0.378 6.378 10 N -0.365 5.365 11 C 0.016 3.984 12 H 0.126 0.874 13 C -0.173 4.173 14 C -0.142 4.142 15 H 0.113 0.887 16 C 0.015 3.985 17 N -0.170 5.170 18 C -0.046 4.046 19 N -0.274 5.274 20 C -0.107 4.107 21 N -0.139 5.139 22 C -0.174 4.174 23 C -0.229 4.229 24 C -0.090 4.090 25 C -0.169 4.169 26 C -0.101 4.101 27 H 0.227 0.773 28 H 0.092 0.908 29 H -0.179 1.179 30 H -0.175 1.175 31 H 0.112 0.888 32 H 0.112 0.888 33 H 0.236 0.764 34 H 0.113 0.887 35 H 0.095 0.905 36 H 0.123 0.877 37 H 0.111 0.889 38 H 0.234 0.766 39 H 0.233 0.767 40 H 0.099 0.901 41 H 0.121 0.879 42 H 0.149 0.851 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 4.295 -2.325 1.205 5.031 hybrid contribution 0.418 -1.354 -0.787 1.621 sum 4.713 -3.678 0.418 5.993 Atomic orbital electron populations 1.86500 1.17043 1.81934 1.49253 1.24518 0.85971 1.09653 0.97130 0.95215 0.80817 0.78457 0.87054 1.18689 1.04556 0.90355 0.96684 1.18744 0.93082 0.90688 0.86790 1.86208 1.77682 1.16754 1.38207 1.22465 1.02506 0.81479 0.97563 1.19985 0.78903 0.82345 0.88285 1.90788 1.47183 1.60923 1.38954 1.45458 1.64805 1.06240 1.20037 1.21841 0.94021 0.93928 0.88637 0.87412 1.23471 0.96164 0.94824 1.02860 1.22961 0.96508 0.94224 1.00502 0.88680 1.21919 0.86164 0.99027 0.91369 1.50604 1.22167 1.08984 1.35264 1.26130 0.95772 0.91047 0.91645 1.70567 1.10664 1.21666 1.24474 1.26078 1.00140 0.87777 0.96681 1.78100 1.00688 1.17758 1.17380 1.23343 0.97732 0.94763 1.01565 1.21284 1.06445 1.00459 0.94754 1.21013 0.96335 0.93921 0.97756 1.21039 1.02794 0.94714 0.98325 1.20888 0.97331 0.99263 0.92644 0.77269 0.90784 1.17950 1.17537 0.88799 0.88835 0.76409 0.88716 0.90457 0.87745 0.88873 0.76590 0.76746 0.90144 0.87868 0.85088 0.85141 0.85246 0.85436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.87 12.86 -35.23 -0.45 -2.32 16 2 C -0.06 -0.18 2.37 36.01 0.09 -0.09 16 3 Si 0.68 0.37 30.21 -169.99 -5.13 -4.76 16 4 C -0.10 -0.43 5.30 -104.47 -0.55 -0.98 16 5 C 0.15 0.56 6.66 -39.21 -0.26 0.30 16 6 O -0.28 -1.12 9.00 -39.33 -0.35 -1.48 16 7 C 0.04 0.00 5.22 36.01 0.19 0.18 16 8 C 0.52 0.81 7.91 -10.99 -0.09 0.73 16 9 O -0.51 -3.21 16.12 -14.35 -0.23 -3.44 16 10 N -0.71 1.33 5.26 -53.01 -0.28 1.05 16 11 C 0.12 -0.22 4.30 -67.11 -0.29 -0.51 16 12 H 0.11 0.01 7.50 -51.93 -0.39 -0.38 16 13 C -0.13 0.19 7.45 -25.77 -0.19 0.00 16 14 C -0.12 0.45 3.74 -89.67 -0.34 0.11 16 15 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 16 C 0.14 -0.53 6.39 -4.04 -0.03 -0.56 16 17 N -0.38 0.18 3.69 -62.62 -0.23 -0.05 16 18 C 0.25 -0.14 12.63 -90.65 -1.14 -1.29 16 19 N -0.55 -1.38 11.19 -15.83 -0.18 -1.56 16 20 C 0.20 0.39 13.03 -91.81 -1.20 -0.81 16 21 N -0.31 -0.71 12.57 29.29 0.37 -0.34 16 22 C -0.14 0.64 7.38 -25.92 -0.19 0.45 16 23 C -0.21 -0.26 9.04 -39.43 -0.36 -0.62 16 24 C -0.07 -0.06 10.04 -39.61 -0.40 -0.46 16 25 C -0.15 -0.26 10.04 -39.56 -0.40 -0.65 16 26 C -0.08 -0.27 8.66 -39.61 -0.34 -0.61 16 27 H 0.38 -0.54 8.74 45.56 0.40 -0.14 16 28 H 0.07 0.20 7.82 -51.93 -0.41 -0.20 16 29 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 30 H -0.25 -0.72 6.74 56.52 0.38 -0.34 16 31 H 0.09 -0.20 7.66 -51.93 -0.40 -0.60 16 32 H 0.09 -0.28 7.66 -51.93 -0.40 -0.67 16 33 H 0.40 -1.90 8.70 -40.82 -0.36 -2.26 16 34 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 35 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 36 H 0.10 -0.70 8.09 -51.93 -0.42 -1.12 16 37 H 0.09 -0.37 7.85 -51.92 -0.41 -0.78 16 38 H 0.22 -1.08 8.06 -52.49 -0.42 -1.50 16 39 H 0.22 -0.18 8.06 -52.49 -0.42 -0.60 16 40 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 41 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 42 H 0.13 -0.23 6.30 -52.49 -0.33 -0.56 16 43 H 0.13 -0.22 8.06 -52.49 -0.42 -0.65 16 44 H 0.13 -0.05 8.06 -52.49 -0.42 -0.48 16 45 H 0.13 0.32 4.90 -52.49 -0.26 0.07 16 LS Contribution 382.79 15.07 5.77 5.77 Total: 0.00 -13.72 382.79 -12.19 -25.92 By element: Atomic # 1 Polarization: -8.00 SS G_CDS: -5.97 Total: -13.98 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -5.50 Total: -4.80 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -0.32 Total: -0.90 kcal Atomic # 8 Polarization: -6.20 SS G_CDS: -1.04 Total: -7.24 kcal Atomic # 14 Polarization: 0.37 SS G_CDS: -5.13 Total: -4.76 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -13.72 -12.19 -25.92 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_2989392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.984 kcal (2) G-P(sol) polarization free energy of solvation -13.722 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.262 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.915 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds