Wall clock time and date at job start Sun Mar 7 2021 04:42:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86298 * 109.47259 * 2 1 4 4 C 1.50696 * 109.47392 * 120.00078 * 2 1 3 5 5 C 1.38268 * 119.94436 * 64.99705 * 4 2 1 6 6 C 1.38144 * 120.05568 * 179.97438 * 5 4 2 7 7 C 1.38728 * 119.94476 * 0.02562 * 6 5 4 8 8 O 1.35904 * 120.05320 * 179.97438 * 7 6 5 9 9 C 1.42904 * 116.99640 * 180.02562 * 8 7 6 10 10 C 1.52998 * 109.46839 * 180.02562 * 9 8 7 11 11 C 1.50710 * 109.46982 * 179.97438 * 10 9 8 12 12 O 1.21278 * 119.99514 * 0.02562 * 11 10 9 13 13 N 1.34776 * 119.99822 * 179.97438 * 11 10 9 14 14 C 1.46493 * 119.99529 * 179.97438 * 13 11 10 15 15 H 1.08995 * 112.85653 * 336.20008 * 14 13 11 16 16 C 1.53790 * 113.69075 * 107.47271 * 14 13 11 17 17 C 1.53782 * 87.08061 * 89.12166 * 16 14 13 18 18 H 1.08990 * 113.69320 * 270.87297 * 17 16 14 19 19 C 1.53000 * 113.60844 * 139.98478 * 17 16 14 20 20 N 1.46494 * 109.47329 * 87.50201 * 19 17 16 21 21 C 1.34438 * 126.82245 * 124.99870 * 20 19 17 22 22 N 1.30831 * 108.07816 * 180.20890 * 21 20 19 23 23 C 1.33251 * 109.82578 * 359.59820 * 22 21 20 24 24 N 1.30712 * 108.94547 * 0.40841 * 23 22 21 25 25 C 1.53782 * 87.08269 * 25.43756 * 17 16 14 26 26 C 1.38736 * 119.88976 * 0.27496 * 7 6 5 27 27 C 1.38145 * 119.93774 * 359.46706 * 26 7 6 28 28 H 0.96704 * 114.00128 * 299.99660 * 1 2 3 29 29 H 1.09008 * 109.46756 * 240.00047 * 2 1 3 30 30 H 1.48510 * 109.99857 * 300.00211 * 3 2 1 31 31 H 1.48495 * 110.00230 * 61.32100 * 3 2 1 32 32 H 1.08004 * 119.97290 * 359.97438 * 5 4 2 33 33 H 1.08001 * 120.02613 * 180.02562 * 6 5 4 34 34 H 1.08993 * 109.47204 * 60.00058 * 9 8 7 35 35 H 1.09004 * 109.46988 * 300.00377 * 9 8 7 36 36 H 1.08995 * 109.47148 * 60.00176 * 10 9 8 37 37 H 1.09004 * 109.47285 * 299.99762 * 10 9 8 38 38 H 0.96994 * 119.99970 * 0.02562 * 13 11 10 39 39 H 1.09005 * 113.60955 * 334.57556 * 16 14 13 40 40 H 1.09000 * 113.61681 * 203.67685 * 16 14 13 41 41 H 1.09005 * 109.47410 * 327.50166 * 19 17 16 42 42 H 1.09000 * 109.46984 * 207.50476 * 19 17 16 43 43 H 1.08002 * 125.95849 * 359.93825 * 21 20 19 44 44 H 1.07997 * 125.52176 * 180.19871 * 23 22 21 45 45 H 1.09004 * 113.61865 * 89.11222 * 25 17 16 46 46 H 1.08996 * 113.61216 * 219.93596 * 25 17 16 47 47 H 1.07996 * 120.02545 * 179.71959 * 26 7 6 48 48 H 1.08000 * 119.96675 * 180.23158 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6840 -2.0605 1.3972 6 6 2.1439 -2.7141 2.5240 7 6 2.8540 -2.0147 3.4889 8 8 3.3071 -2.6554 4.5985 9 6 4.0302 -1.8720 5.5500 10 6 4.4566 -2.7587 6.7217 11 6 5.2199 -1.9327 7.7250 12 8 5.4041 -0.7512 7.5229 13 7 5.6967 -2.5070 8.8472 14 6 6.4391 -1.7041 9.8221 15 1 6.8932 -0.8166 9.3816 16 6 5.6537 -1.4180 11.1130 17 6 6.2392 -2.7280 11.6662 18 1 5.6321 -3.6061 11.4469 19 6 6.6502 -2.6423 13.1375 20 7 5.4995 -2.9633 13.9855 21 6 5.4413 -3.9070 14.9412 22 7 4.2422 -3.8819 15.4641 23 6 3.5129 -2.9339 14.8768 24 7 4.2383 -2.3459 13.9621 25 6 7.4082 -2.5270 10.6875 26 6 3.0955 -0.6587 3.3222 27 6 2.6380 -0.0109 2.1910 28 1 -0.3933 0.4417 0.7651 29 1 1.7922 -0.5139 -0.8901 30 1 1.5614 2.4679 -1.2086 31 1 1.5879 2.4585 1.2242 32 1 1.1307 -2.6046 0.6459 33 1 1.9508 -3.7688 2.6536 34 1 3.3938 -1.0666 5.9163 35 1 4.9149 -1.4484 5.0746 36 1 5.0933 -3.5639 6.3551 37 1 3.5721 -3.1826 7.1973 38 1 5.5490 -3.4518 9.0089 39 1 4.5720 -1.4447 10.9810 40 1 5.9946 -0.5289 11.6435 41 1 6.9951 -1.6326 13.3603 42 1 7.4542 -3.3521 13.3321 43 1 6.2429 -4.5730 15.2246 44 1 2.4876 -2.6929 15.1154 45 1 8.2288 -1.9411 11.1017 46 1 7.7438 -3.4491 10.2130 47 1 3.6442 -0.1111 4.0741 48 1 2.8290 1.0439 2.0590 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:02 Heat of formation + Delta-G solvation = 44.843448 kcal Electronic energy + Delta-G solvation = -29994.974635 eV Core-core repulsion = 25634.013178 eV Total energy + Delta-G solvation = -4360.961457 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -43.02357 -41.58926 -41.17150 -39.79614 -39.07667 -37.23922 -35.54135 -34.12476 -33.22723 -32.15774 -32.00262 -31.40357 -29.25444 -26.96145 -26.67757 -25.76611 -24.57043 -23.50380 -22.92860 -22.48246 -22.23871 -21.68185 -20.52626 -19.55045 -18.50919 -18.35614 -17.83123 -17.53528 -17.28625 -16.95145 -16.86978 -16.43222 -16.29082 -16.07670 -15.97649 -15.71115 -15.48196 -15.40786 -14.93093 -14.72966 -14.70954 -14.47600 -14.27050 -14.22218 -14.03309 -13.67771 -13.42058 -13.25086 -13.01615 -12.91336 -12.87001 -12.42393 -12.16599 -12.04662 -11.88729 -11.81163 -11.52078 -11.50262 -11.08287 -10.95233 -10.76348 -10.65159 -10.54262 -10.23731 -9.99406 -9.17572 -4.93493 0.33149 0.35507 0.65179 1.27548 1.32343 1.42826 1.59841 1.61714 1.98723 2.02800 2.37660 2.69812 3.04151 3.20299 3.36420 3.39192 3.42032 3.44151 3.53848 3.71046 3.76370 3.79963 3.81671 3.84518 3.90454 3.94509 3.97057 4.15338 4.23084 4.30148 4.35165 4.38297 4.43093 4.49171 4.53880 4.55820 4.60459 4.62239 4.74953 4.76479 4.90722 4.94326 4.99556 5.21710 5.26003 5.32814 5.38464 5.46122 5.53392 5.74564 5.78466 6.23940 6.36713 6.44319 7.00637 7.11883 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.683 3.317 4 C -0.156 4.156 5 C -0.053 4.053 6 C -0.151 4.151 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.524 3.476 12 O -0.534 6.534 13 N -0.712 5.712 14 C 0.118 3.882 15 H 0.108 0.892 16 C -0.134 4.134 17 C -0.123 4.123 18 H 0.095 0.905 19 C 0.137 3.863 20 N -0.379 5.379 21 C 0.251 3.749 22 N -0.547 5.547 23 C 0.196 3.804 24 N -0.312 5.312 25 C -0.136 4.136 26 C -0.203 4.203 27 C -0.077 4.077 28 H 0.376 0.624 29 H 0.117 0.883 30 H -0.257 1.257 31 H -0.261 1.261 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.073 0.927 35 H 0.074 0.926 36 H 0.108 0.892 37 H 0.107 0.893 38 H 0.403 0.597 39 H 0.076 0.924 40 H 0.094 0.906 41 H 0.093 0.907 42 H 0.104 0.896 43 H 0.218 0.782 44 H 0.216 0.784 45 H 0.102 0.898 46 H 0.080 0.920 47 H 0.134 0.866 48 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.171 -3.218 1.752 7.177 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.584 3.416 4 C -0.157 4.157 5 C -0.071 4.071 6 C -0.169 4.169 7 C 0.092 3.908 8 O -0.230 6.230 9 C -0.002 4.002 10 C -0.182 4.182 11 C 0.311 3.689 12 O -0.411 6.411 13 N -0.363 5.363 14 C 0.012 3.988 15 H 0.126 0.874 16 C -0.173 4.173 17 C -0.142 4.142 18 H 0.113 0.887 19 C 0.015 3.985 20 N -0.170 5.170 21 C -0.046 4.046 22 N -0.274 5.274 23 C -0.107 4.107 24 N -0.140 5.140 25 C -0.175 4.175 26 C -0.221 4.221 27 C -0.095 4.095 28 H 0.223 0.777 29 H 0.135 0.865 30 H -0.182 1.182 31 H -0.186 1.186 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.091 0.909 35 H 0.092 0.908 36 H 0.126 0.874 37 H 0.126 0.874 38 H 0.237 0.763 39 H 0.095 0.905 40 H 0.112 0.888 41 H 0.111 0.889 42 H 0.123 0.877 43 H 0.234 0.766 44 H 0.233 0.767 45 H 0.120 0.880 46 H 0.099 0.901 47 H 0.152 0.848 48 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 5.863 -1.633 0.865 6.147 hybrid contribution -0.831 -0.660 0.898 1.390 sum 5.032 -2.293 1.762 5.804 Atomic orbital electron populations 1.86595 1.17859 1.79951 1.49316 1.24933 0.83828 1.10748 0.98397 0.95015 0.91738 0.74728 0.80093 1.20170 1.02683 0.95108 0.97725 1.20839 0.96514 0.93469 0.96264 1.20503 1.01757 1.00837 0.93828 1.18996 0.94110 0.90940 0.86720 1.85976 1.69137 1.38513 1.29368 1.22421 0.96459 0.93260 0.88027 1.21469 1.02212 0.99622 0.94849 1.20298 0.78831 0.88018 0.81803 1.90758 1.57619 1.15993 1.76693 1.45608 1.56795 1.13193 1.20734 1.21850 0.92980 0.95449 0.88493 0.87440 1.23414 1.01407 0.96946 0.95539 1.22908 0.98712 1.00213 0.92341 0.88661 1.21920 0.84174 1.03463 0.88938 1.50596 1.10957 1.26922 1.28521 1.26136 0.97197 0.92821 0.88405 1.70571 1.03086 1.23435 1.30270 1.26078 1.01128 0.91698 0.91761 1.78088 0.90836 1.21442 1.23644 1.23354 0.96681 1.01318 0.96159 1.21266 1.06401 0.93837 1.00620 1.20853 0.96225 0.99436 0.92940 0.77689 0.86498 1.18236 1.18630 0.84916 0.84870 0.90895 0.90751 0.87364 0.87449 0.76250 0.90540 0.88802 0.88922 0.87737 0.76571 0.76749 0.87979 0.90141 0.84820 0.85343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.95 12.83 -35.23 -0.45 -1.40 16 2 C -0.07 -0.02 2.80 36.00 0.10 0.08 16 3 Si 0.68 -0.22 29.88 -169.99 -5.08 -5.29 16 4 C -0.16 -0.13 5.35 -104.60 -0.56 -0.69 16 5 C -0.05 -0.05 9.68 -39.60 -0.38 -0.44 16 6 C -0.15 -0.21 9.99 -39.43 -0.39 -0.60 16 7 C 0.14 0.26 6.69 -39.22 -0.26 -0.01 16 8 O -0.32 -0.45 10.14 -19.44 -0.20 -0.65 16 9 C 0.07 0.00 4.03 37.16 0.15 0.15 16 10 C -0.14 0.31 6.07 -27.88 -0.17 0.14 16 11 C 0.52 -0.12 7.83 -10.98 -0.09 -0.21 16 12 O -0.53 -2.01 15.58 5.56 0.09 -1.93 16 13 N -0.71 1.80 5.27 -53.01 -0.28 1.52 16 14 C 0.12 -0.27 4.32 -67.11 -0.29 -0.56 16 15 H 0.11 -0.06 7.46 -51.93 -0.39 -0.44 16 16 C -0.13 0.25 7.43 -25.91 -0.19 0.06 16 17 C -0.12 0.47 3.73 -89.81 -0.34 0.14 16 18 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 19 C 0.14 -0.55 6.39 -4.04 -0.03 -0.58 16 20 N -0.38 0.25 3.69 -62.63 -0.23 0.02 16 21 C 0.25 -0.18 12.63 -90.65 -1.14 -1.32 16 22 N -0.55 -1.30 11.19 -15.83 -0.18 -1.47 16 23 C 0.20 0.35 13.03 -91.80 -1.20 -0.85 16 24 N -0.31 -0.63 12.57 29.29 0.37 -0.26 16 25 C -0.14 0.67 7.39 -25.91 -0.19 0.48 16 26 C -0.20 -0.24 9.04 -39.43 -0.36 -0.60 16 27 C -0.08 -0.05 8.66 -39.61 -0.34 -0.40 16 28 H 0.38 -0.34 8.70 45.56 0.40 0.06 16 29 H 0.12 -0.06 7.96 -51.92 -0.41 -0.47 16 30 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 31 H -0.26 -0.44 7.00 56.52 0.40 -0.04 16 32 H 0.13 0.01 8.06 -52.48 -0.42 -0.42 16 33 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 34 H 0.07 0.04 7.61 -51.93 -0.40 -0.36 16 35 H 0.07 0.01 7.63 -51.93 -0.40 -0.39 16 36 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 37 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 38 H 0.40 -1.97 8.70 -40.82 -0.36 -2.33 16 39 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 41 H 0.09 -0.39 7.84 -51.93 -0.41 -0.79 16 42 H 0.10 -0.71 8.09 -51.93 -0.42 -1.13 16 43 H 0.22 -1.11 8.06 -52.49 -0.42 -1.53 16 44 H 0.22 -0.23 8.06 -52.49 -0.42 -0.66 16 45 H 0.10 -0.60 8.10 -51.93 -0.42 -1.02 16 46 H 0.08 -0.43 8.14 -51.93 -0.42 -0.86 16 47 H 0.13 0.02 6.30 -52.49 -0.33 -0.31 16 48 H 0.13 -0.11 4.83 -52.49 -0.25 -0.36 16 LS Contribution 404.38 15.07 6.09 6.09 Total: 0.00 -11.32 404.38 -12.35 -23.67 By element: Atomic # 1 Polarization: -8.28 SS G_CDS: -6.80 Total: -15.09 kcal Atomic # 6 Polarization: 0.47 SS G_CDS: -5.68 Total: -5.21 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.32 Total: -0.20 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.56 Total: -3.98 kcal Atomic # 14 Polarization: -0.22 SS G_CDS: -5.08 Total: -5.29 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -11.32 -12.35 -23.67 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.516 kcal (2) G-P(sol) polarization free energy of solvation -11.324 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.672 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.843 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds