Wall clock time and date at job start Sun Mar 7 2021 04:42:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86306 * 109.47304 * 2 1 4 4 C 1.50701 * 109.47330 * 120.00429 * 2 1 3 5 5 C 1.38244 * 119.96874 * 245.29178 * 4 2 1 6 6 C 1.38288 * 120.10735 * 180.25379 * 5 4 2 7 7 C 1.38126 * 120.05387 * 359.44975 * 6 5 4 8 8 C 1.38746 * 119.94556 * 0.28104 * 7 6 5 9 9 O 1.35900 * 120.05764 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99943 * 359.97438 * 9 8 7 11 11 C 1.53004 * 109.47331 * 180.02562 * 10 9 8 12 12 C 1.50705 * 109.46881 * 180.02562 * 11 10 9 13 13 O 1.21276 * 120.00130 * 359.97438 * 12 11 10 14 14 N 1.34769 * 119.99544 * 180.02562 * 12 11 10 15 15 C 1.46501 * 120.00192 * 179.97438 * 14 12 11 16 16 H 1.09001 * 112.84749 * 25.33237 * 15 14 12 17 17 C 1.53777 * 113.61820 * 156.52306 * 15 14 12 18 18 C 1.53785 * 87.07950 * 89.11936 * 17 15 14 19 19 H 1.08996 * 113.61482 * 270.88381 * 18 17 15 20 20 C 1.53000 * 113.61409 * 140.06630 * 18 17 15 21 21 N 1.46501 * 109.47124 * 175.00201 * 20 18 17 22 22 C 1.34431 * 126.82864 * 124.70883 * 21 20 18 23 23 N 1.30831 * 108.07928 * 179.89377 * 22 21 20 24 24 C 1.33233 * 109.82976 * 0.38235 * 23 22 21 25 25 N 1.30720 * 108.94740 * 359.76174 * 24 23 22 26 26 C 1.53774 * 113.61534 * 254.13522 * 15 14 12 27 27 C 1.38166 * 119.97212 * 64.99802 * 4 2 1 28 28 H 0.96698 * 114.00367 * 299.99560 * 1 2 3 29 29 H 1.09007 * 109.46933 * 240.00527 * 2 1 3 30 30 H 1.48497 * 110.00196 * 178.68353 * 3 2 1 31 31 H 1.48500 * 109.99890 * 300.00694 * 3 2 1 32 32 H 1.07993 * 119.94966 * 0.02562 * 5 4 2 33 33 H 1.08002 * 119.97455 * 179.73146 * 6 5 4 34 34 H 1.07999 * 120.02655 * 180.25493 * 7 6 5 35 35 H 1.09002 * 109.46947 * 300.00698 * 10 9 8 36 36 H 1.08998 * 109.47276 * 60.00138 * 10 9 8 37 37 H 1.08997 * 109.46741 * 300.00019 * 11 10 9 38 38 H 1.08992 * 109.46839 * 60.00090 * 11 10 9 39 39 H 0.97009 * 120.00706 * 359.97438 * 14 12 11 40 40 H 1.09003 * 113.61651 * 203.66587 * 17 15 14 41 41 H 1.09002 * 113.61843 * 334.48759 * 17 15 14 42 42 H 1.08998 * 109.47348 * 294.99887 * 20 18 17 43 43 H 1.08994 * 109.47290 * 55.00375 * 20 18 17 44 44 H 1.07998 * 125.95334 * 0.03893 * 22 21 20 45 45 H 1.08002 * 125.52843 * 179.72577 * 24 23 22 46 46 H 1.08999 * 113.61902 * 25.43279 * 26 15 14 47 47 H 1.09006 * 113.61450 * 156.33278 * 26 15 14 48 48 H 1.08007 * 120.02833 * 0.04906 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6335 -0.0105 2.1937 6 6 3.1003 -0.6607 3.3214 7 6 2.8562 -2.0093 3.4932 8 6 2.1469 -2.7129 2.5304 9 8 1.9049 -4.0397 2.6974 10 6 2.4107 -4.6466 3.8882 11 6 2.0433 -6.1318 3.8994 12 6 2.5763 -6.7716 5.1555 13 8 3.1899 -6.1054 5.9620 14 7 2.3719 -8.0843 5.3819 15 6 2.8903 -8.7065 6.6027 16 1 3.0173 -7.9955 7.4191 17 6 2.1381 -9.9843 7.0103 18 6 3.1342 -10.7573 6.1296 19 1 2.8151 -10.8550 5.0920 20 6 3.5889 -12.0850 6.7390 21 7 4.4363 -12.7977 5.7798 22 6 5.6852 -13.2496 5.9881 23 7 6.0951 -13.8309 4.8901 24 6 5.1432 -13.7631 3.9603 25 7 4.1077 -13.1393 4.4577 26 6 4.1207 -9.5978 6.3651 27 6 1.6845 -2.0596 1.3976 28 1 -0.3934 0.4416 0.7650 29 1 1.7922 -0.5138 -0.8901 30 1 3.5346 1.7703 0.0321 31 1 1.5614 2.4680 -1.2084 32 1 2.8209 1.0451 2.0637 33 1 3.6524 -0.1126 4.0706 34 1 3.2174 -2.5157 4.3760 35 1 3.4951 -4.5406 3.9176 36 1 1.9742 -4.1574 4.7590 37 1 0.9590 -6.2380 3.8698 38 1 2.4802 -6.6206 3.0287 39 1 1.8814 -8.6173 4.7367 40 1 2.2198 -10.2195 8.0715 41 1 1.1113 -10.0215 6.6463 42 1 4.1549 -11.8916 7.6502 43 1 2.7164 -12.6939 6.9755 44 1 6.2504 -13.1519 6.9032 45 1 5.2155 -14.1588 2.9580 46 1 4.6941 -9.3237 5.4795 47 1 4.7435 -9.7274 7.2503 48 1 1.1324 -2.6052 0.6465 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:06 Heat of formation + Delta-G solvation = 43.844924 kcal Electronic energy + Delta-G solvation = -30018.257031 eV Core-core repulsion = 25657.252275 eV Total energy + Delta-G solvation = -4361.004756 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.99114 -41.56446 -41.18006 -39.72774 -39.06462 -37.28017 -35.44894 -34.08597 -33.11752 -32.48730 -32.16444 -30.86971 -29.08838 -27.07394 -26.75523 -25.74500 -24.31191 -23.70536 -22.94187 -22.44675 -22.20680 -21.55347 -20.22097 -19.41483 -18.44310 -18.10165 -17.75432 -17.54819 -17.14977 -17.12037 -16.94309 -16.73504 -16.25244 -16.02036 -15.96390 -15.73358 -15.38975 -15.15116 -15.02091 -14.92140 -14.65162 -14.42069 -14.22745 -14.13315 -13.78640 -13.47941 -13.31376 -13.25011 -12.96991 -12.86505 -12.74775 -12.40714 -12.15848 -12.06414 -11.85642 -11.77146 -11.65673 -11.43542 -11.14791 -10.97500 -10.79268 -10.51812 -10.49733 -10.15387 -9.97315 -9.30515 -4.99177 0.16949 0.36128 0.69405 1.28702 1.42080 1.45497 1.63728 1.66430 1.96536 2.00490 2.42778 2.63743 3.36912 3.45834 3.47454 3.47962 3.52003 3.53457 3.65085 3.75047 3.81397 3.84256 3.90670 3.94497 4.06598 4.15362 4.19200 4.21020 4.23606 4.33849 4.47276 4.48970 4.52088 4.58287 4.60779 4.66942 4.71302 4.73674 4.81710 4.94382 4.94911 5.01410 5.14994 5.22913 5.30741 5.35170 5.41097 5.45313 5.52414 5.67710 5.94225 6.28687 6.37338 6.74923 7.06769 7.12812 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.079 4.079 3 Si 0.786 3.214 4 C -0.085 4.085 5 C -0.154 4.154 6 C -0.075 4.075 7 C -0.211 4.211 8 C 0.115 3.885 9 O -0.326 6.326 10 C 0.075 3.925 11 C -0.135 4.135 12 C 0.523 3.477 13 O -0.579 6.579 14 N -0.702 5.702 15 C 0.111 3.889 16 H 0.091 0.909 17 C -0.117 4.117 18 C -0.116 4.116 19 H 0.087 0.913 20 C 0.131 3.869 21 N -0.376 5.376 22 C 0.255 3.745 23 N -0.586 5.586 24 C 0.185 3.815 25 N -0.347 5.347 26 C -0.145 4.145 27 C -0.143 4.143 28 H 0.396 0.604 29 H 0.105 0.895 30 H -0.285 1.285 31 H -0.298 1.298 32 H 0.151 0.849 33 H 0.155 0.845 34 H 0.137 0.863 35 H 0.063 0.937 36 H 0.069 0.931 37 H 0.127 0.873 38 H 0.121 0.879 39 H 0.416 0.584 40 H 0.123 0.877 41 H 0.086 0.914 42 H 0.138 0.862 43 H 0.100 0.900 44 H 0.256 0.744 45 H 0.231 0.769 46 H 0.046 0.954 47 H 0.109 0.891 48 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.401 -0.238 6.571 7.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.188 4.188 3 Si 0.692 3.308 4 C -0.086 4.086 5 C -0.172 4.172 6 C -0.092 4.092 7 C -0.230 4.230 8 C 0.070 3.930 9 O -0.240 6.240 10 C 0.000 4.000 11 C -0.174 4.174 12 C 0.311 3.689 13 O -0.459 6.459 14 N -0.353 5.353 15 C 0.005 3.995 16 H 0.110 0.890 17 C -0.156 4.156 18 C -0.135 4.135 19 H 0.105 0.895 20 C 0.011 3.989 21 N -0.166 5.166 22 C -0.041 4.041 23 N -0.314 5.314 24 C -0.118 4.118 25 N -0.176 5.176 26 C -0.184 4.184 27 C -0.162 4.162 28 H 0.246 0.754 29 H 0.123 0.877 30 H -0.212 1.212 31 H -0.226 1.226 32 H 0.169 0.831 33 H 0.173 0.827 34 H 0.155 0.845 35 H 0.081 0.919 36 H 0.087 0.913 37 H 0.145 0.855 38 H 0.139 0.861 39 H 0.253 0.747 40 H 0.141 0.859 41 H 0.105 0.895 42 H 0.156 0.844 43 H 0.118 0.882 44 H 0.272 0.728 45 H 0.247 0.753 46 H 0.065 0.935 47 H 0.127 0.873 48 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -1.931 0.371 5.693 6.023 hybrid contribution 0.192 -1.032 -0.496 1.161 sum -1.738 -0.662 5.197 5.520 Atomic orbital electron populations 1.86471 1.17131 1.82262 1.50454 1.25317 0.85385 1.11349 0.96755 0.93577 0.77780 0.74744 0.84722 1.20253 0.98046 0.93346 0.96917 1.21178 1.00830 1.00519 0.94663 1.21273 0.97081 0.93367 0.97518 1.21556 1.04179 0.96655 1.00568 1.19152 0.95876 0.82913 0.95037 1.85954 1.74695 1.20432 1.42918 1.22426 0.99094 0.92890 0.85600 1.21442 1.05497 0.93684 0.96791 1.20563 0.78628 0.82317 0.87397 1.90731 1.42775 1.63535 1.48879 1.45597 1.57119 1.09006 1.23618 1.21892 0.95453 0.94665 0.87468 0.89046 1.23292 0.98641 0.91697 1.01945 1.22874 0.97718 0.92308 1.00619 0.89516 1.22267 0.95499 0.91755 0.89428 1.50751 1.13348 1.42599 1.09919 1.26847 0.84999 0.92293 1.00004 1.70540 1.32839 1.26335 1.01717 1.26436 0.86802 0.97183 1.01334 1.77928 1.24973 1.22038 0.92658 1.23592 0.96645 0.95621 1.02496 1.20329 1.04010 0.94474 0.97336 0.75416 0.87731 1.21231 1.22622 0.83146 0.82736 0.84531 0.91856 0.91293 0.85463 0.86136 0.74746 0.85883 0.89495 0.84420 0.88151 0.72824 0.75318 0.93489 0.87264 0.85664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.02 12.83 -148.98 -1.91 -2.93 16 2 C -0.08 -0.09 2.80 71.24 0.20 0.11 16 3 Si 0.79 -1.33 29.80 68.60 2.04 0.71 16 4 C -0.09 -0.21 5.35 -19.88 -0.11 -0.32 16 5 C -0.15 0.05 8.67 22.28 0.19 0.24 16 6 C -0.07 -0.01 10.04 22.26 0.22 0.21 16 7 C -0.21 -0.69 9.04 22.36 0.20 -0.49 16 8 C 0.12 0.69 6.69 22.50 0.15 0.84 16 9 O -0.33 -1.76 10.14 -92.42 -0.94 -2.69 16 10 C 0.08 0.14 4.03 71.98 0.29 0.43 16 11 C -0.13 0.41 6.07 29.85 0.18 0.59 16 12 C 0.52 0.41 7.83 87.66 0.69 1.09 16 13 O -0.58 -5.33 15.60 -3.02 -0.05 -5.37 16 14 N -0.70 3.03 5.26 -440.06 -2.32 0.71 16 15 C 0.11 -0.54 4.29 45.51 0.20 -0.35 16 16 H 0.09 -0.11 7.50 -2.39 -0.02 -0.13 16 17 C -0.12 1.25 7.38 31.12 0.23 1.48 16 18 C -0.12 0.92 3.76 -10.18 -0.04 0.88 16 19 H 0.09 -0.31 8.00 -2.39 -0.02 -0.33 16 20 C 0.13 -1.21 6.39 86.38 0.55 -0.66 16 21 N -0.38 0.54 3.69 -352.07 -1.30 -0.76 16 22 C 0.25 -0.37 12.63 180.36 2.28 1.91 16 23 N -0.59 -3.30 11.19 -204.00 -2.28 -5.59 16 24 C 0.19 0.87 13.03 180.77 2.36 3.23 16 25 N -0.35 -1.67 12.45 -61.25 -0.76 -2.43 16 26 C -0.14 0.80 7.45 31.21 0.23 1.03 16 27 C -0.14 -0.82 9.62 22.36 0.22 -0.61 16 28 H 0.40 -2.57 8.70 -74.06 -0.64 -3.22 16 29 H 0.11 0.27 7.96 -2.38 -0.02 0.25 16 30 H -0.29 -0.86 7.11 99.48 0.71 -0.15 16 31 H -0.30 -1.67 7.11 99.48 0.71 -0.97 16 32 H 0.15 -0.83 4.91 -2.91 -0.01 -0.84 16 33 H 0.15 -0.79 8.06 -2.91 -0.02 -0.81 16 34 H 0.14 0.23 6.30 -2.91 -0.02 0.21 16 35 H 0.06 0.21 7.62 -2.39 -0.02 0.20 16 36 H 0.07 0.17 7.62 -2.39 -0.02 0.16 16 37 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 38 H 0.12 -0.67 8.14 -2.39 -0.02 -0.69 16 39 H 0.42 -3.71 8.70 -92.70 -0.81 -4.52 16 40 H 0.12 -1.77 8.10 -2.39 -0.02 -1.79 16 41 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 42 H 0.14 -2.19 7.80 -2.39 -0.02 -2.21 16 43 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 44 H 0.26 -2.90 8.06 -2.91 -0.02 -2.92 16 45 H 0.23 -0.20 8.06 -2.91 -0.02 -0.22 16 46 H 0.05 0.01 8.14 -2.39 -0.02 -0.01 16 47 H 0.11 -0.94 7.91 -2.38 -0.02 -0.95 16 48 H 0.13 0.80 8.06 -2.91 -0.02 0.78 16 Total: 0.00 -29.91 404.31 0.12 -29.79 By element: Atomic # 1 Polarization: -20.66 SS G_CDS: -0.41 Total: -21.07 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: 8.04 Total: 9.63 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: -6.66 Total: -8.07 kcal Atomic # 8 Polarization: -8.10 SS G_CDS: -2.90 Total: -11.00 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: 2.04 Total: 0.71 kcal Total: -29.91 0.12 -29.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 73.639 kcal (2) G-P(sol) polarization free energy of solvation -29.911 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.794 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds