Wall clock time and date at job start Sun Mar 7 2021 04:42:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86301 * 109.47185 * 2 1 4 4 C 1.50702 * 109.47299 * 239.99703 * 2 1 3 5 5 C 1.38244 * 119.97307 * 119.99712 * 4 2 1 6 6 C 1.38284 * 120.11190 * 180.02562 * 5 4 2 7 7 C 1.38118 * 120.05623 * 0.02562 * 6 5 4 8 8 C 1.38753 * 119.94889 * 359.97226 * 7 6 5 9 9 O 1.35901 * 120.06027 * 180.02562 * 8 7 6 10 10 C 1.42892 * 116.99862 * 0.02562 * 9 8 7 11 11 C 1.52999 * 109.47318 * 180.02562 * 10 9 8 12 12 C 1.52997 * 109.47695 * 180.02562 * 11 10 9 13 13 C 1.50695 * 109.47385 * 180.02562 * 12 11 10 14 14 O 1.21281 * 119.99943 * 359.97438 * 13 12 11 15 15 N 1.34778 * 120.00107 * 180.02562 * 13 12 11 16 16 C 1.46498 * 120.00186 * 180.02562 * 15 13 12 17 17 H 1.08999 * 112.90525 * 336.24628 * 16 15 13 18 18 C 1.53778 * 113.61736 * 107.49948 * 16 15 13 19 19 C 1.53784 * 87.08081 * 89.11728 * 18 16 15 20 20 H 1.09004 * 113.61451 * 270.88641 * 19 18 16 21 21 C 1.52992 * 113.61673 * 139.98135 * 19 18 16 22 22 N 1.46503 * 109.47166 * 87.50094 * 21 19 18 23 23 C 1.34431 * 126.82362 * 125.00416 * 22 21 19 24 24 N 1.30831 * 108.07782 * 179.97438 * 23 22 21 25 25 C 1.33237 * 109.83037 * 359.97438 * 24 23 22 26 26 N 1.30715 * 108.94479 * 359.75928 * 25 24 23 27 27 C 1.53778 * 113.61412 * 205.00214 * 16 15 13 28 28 C 1.38168 * 119.96972 * 300.26032 * 4 2 1 29 29 H 0.96698 * 113.99864 * 300.00234 * 1 2 3 30 30 H 1.09004 * 109.46945 * 120.00042 * 2 1 3 31 31 H 1.48502 * 109.99635 * 178.68083 * 3 2 1 32 32 H 1.48501 * 109.99761 * 299.99643 * 3 2 1 33 33 H 1.08003 * 119.94277 * 0.02562 * 5 4 2 34 34 H 1.08003 * 119.96975 * 179.97438 * 6 5 4 35 35 H 1.08003 * 120.02769 * 180.02562 * 7 6 5 36 36 H 1.09002 * 109.47289 * 59.99836 * 10 9 8 37 37 H 1.08998 * 109.47356 * 299.99969 * 10 9 8 38 38 H 1.09002 * 109.47097 * 59.99690 * 11 10 9 39 39 H 1.08999 * 109.46855 * 300.00797 * 11 10 9 40 40 H 1.09002 * 109.47262 * 59.99594 * 12 11 10 41 41 H 1.09001 * 109.46739 * 300.00409 * 12 11 10 42 42 H 0.97004 * 119.99709 * 359.97438 * 15 13 12 43 43 H 1.08993 * 113.61229 * 334.57051 * 18 16 15 44 44 H 1.09000 * 113.61263 * 203.66701 * 18 16 15 45 45 H 1.08996 * 109.47544 * 207.50317 * 21 19 18 46 46 H 1.09007 * 109.47088 * 327.50753 * 21 19 18 47 47 H 1.08001 * 125.95799 * 359.92465 * 23 22 21 48 48 H 1.07999 * 125.53244 * 179.97438 * 25 24 23 49 49 H 1.08998 * 113.61879 * 156.33410 * 27 16 15 50 50 H 1.08997 * 113.69304 * 25.43496 * 27 16 15 51 51 H 1.07999 * 120.03458 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7261 -0.0381 -2.1401 6 6 3.1882 -0.6871 -3.2704 7 6 2.8562 -2.0091 -3.4934 8 6 2.0588 -2.6863 -2.5819 9 8 1.7311 -3.9872 -2.7989 10 6 2.2430 -4.5958 -3.9860 11 6 1.7717 -6.0496 -4.0579 12 6 2.3202 -6.7015 -5.3287 13 6 1.8554 -8.1332 -5.3998 14 8 1.1547 -8.5877 -4.5203 15 7 2.2192 -8.9090 -6.4401 16 6 1.7668 -10.3007 -6.5095 17 1 1.5153 -10.7142 -5.5329 18 6 0.6887 -10.5455 -7.5784 19 6 1.8383 -10.8142 -8.5638 20 1 2.1944 -9.9191 -9.0738 21 6 1.5663 -11.9764 -9.5208 22 7 0.8570 -11.4801 -10.7027 23 6 1.2273 -11.6295 -11.9863 24 7 0.3302 -11.0452 -12.7383 25 6 -0.6237 -10.5146 -11.9743 26 7 -0.3482 -10.7594 -10.7202 27 6 2.6878 -11.2069 -7.3434 28 6 1.5928 -2.0317 -1.4511 29 1 -0.3933 0.4417 0.7650 30 1 1.7923 -0.5139 0.8900 31 1 3.5346 1.7702 0.0321 32 1 1.5615 2.4678 -1.2086 33 1 2.9865 0.9958 -1.9677 34 1 3.8086 -0.1595 -3.9797 35 1 3.2177 -2.5156 -4.3761 36 1 3.3325 -4.5672 -3.9683 37 1 1.8795 -4.0529 -4.8585 38 1 0.6822 -6.0779 -4.0759 39 1 2.1347 -6.5928 -3.1855 40 1 3.4097 -6.6733 -5.3104 41 1 1.9575 -6.1583 -6.2013 42 1 2.7799 -8.5456 -7.1433 43 1 0.1045 -9.6578 -7.8206 44 1 0.0691 -11.4204 -7.3812 45 1 2.5117 -12.4248 -9.8260 46 1 0.9544 -12.7255 -9.0180 47 1 2.1116 -12.1417 -12.3358 48 1 -1.4866 -9.9732 -12.3331 49 1 2.6148 -12.2626 -7.0822 50 1 3.7178 -10.8543 -7.3968 51 1 0.9688 -2.5555 -0.7422 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:12 Heat of formation + Delta-G solvation = 40.445851 kcal Electronic energy + Delta-G solvation = -31593.343336 eV Core-core repulsion = 27076.653566 eV Total energy + Delta-G solvation = -4516.689770 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.183 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.01474 -41.46390 -41.20239 -39.72665 -39.04724 -37.32083 -35.51088 -34.95078 -33.87284 -32.56867 -32.14820 -31.27546 -29.46897 -28.24031 -26.92860 -26.78072 -24.80817 -23.71856 -23.49846 -22.91845 -22.45770 -21.82202 -21.57059 -20.47281 -18.92301 -18.51648 -18.39709 -18.14220 -17.53575 -17.41428 -17.13109 -16.99133 -16.80936 -16.41518 -16.19954 -15.84375 -15.59728 -15.47897 -15.36075 -14.97265 -14.82399 -14.61429 -14.53681 -14.29191 -14.23993 -13.95107 -13.70379 -13.51585 -13.36256 -13.27268 -13.13383 -12.94770 -12.58447 -12.47072 -12.39579 -12.23800 -12.02235 -11.84669 -11.71675 -11.66831 -11.46928 -10.95439 -10.93510 -10.75271 -10.63894 -10.39931 -10.15783 -9.84873 -9.21820 -4.96472 0.22385 0.42025 0.66181 1.27021 1.28673 1.54815 1.64620 1.81371 1.98292 2.03617 2.27600 2.66132 3.06304 3.23659 3.37226 3.37603 3.41698 3.48169 3.58966 3.74258 3.75792 3.81982 3.82692 3.87673 3.91905 3.95494 3.98104 4.08453 4.14853 4.17840 4.21158 4.24845 4.29826 4.36382 4.37287 4.45948 4.52274 4.52948 4.63094 4.67347 4.78859 4.93141 4.95111 4.97913 4.98961 5.13140 5.26998 5.27560 5.36529 5.45339 5.45997 5.47218 5.68969 5.79430 6.34498 6.42132 6.62795 7.12765 7.13264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.688 3.312 4 C -0.036 4.036 5 C -0.164 4.164 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.134 3.866 9 O -0.310 6.310 10 C 0.059 3.941 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.518 3.482 14 O -0.531 6.531 15 N -0.716 5.716 16 C 0.118 3.882 17 H 0.107 0.893 18 C -0.135 4.135 19 C -0.122 4.122 20 H 0.095 0.905 21 C 0.137 3.863 22 N -0.379 5.379 23 C 0.251 3.749 24 N -0.547 5.547 25 C 0.196 3.804 26 N -0.312 5.312 27 C -0.137 4.137 28 C -0.122 4.122 29 H 0.383 0.617 30 H 0.077 0.923 31 H -0.255 1.255 32 H -0.250 1.250 33 H 0.119 0.881 34 H 0.130 0.870 35 H 0.131 0.869 36 H 0.064 0.936 37 H 0.064 0.936 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.099 0.901 41 H 0.098 0.902 42 H 0.401 0.599 43 H 0.076 0.924 44 H 0.093 0.907 45 H 0.104 0.896 46 H 0.093 0.907 47 H 0.218 0.782 48 H 0.216 0.784 49 H 0.101 0.899 50 H 0.079 0.921 51 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.653 -0.259 0.042 5.660 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.184 4.184 3 Si 0.589 3.411 4 C -0.036 4.036 5 C -0.181 4.181 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.089 3.911 9 O -0.223 6.223 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.304 3.696 14 O -0.406 6.406 15 N -0.367 5.367 16 C 0.012 3.988 17 H 0.125 0.875 18 C -0.173 4.173 19 C -0.142 4.142 20 H 0.113 0.887 21 C 0.015 3.985 22 N -0.170 5.170 23 C -0.046 4.046 24 N -0.274 5.274 25 C -0.107 4.107 26 N -0.140 5.140 27 C -0.175 4.175 28 C -0.140 4.140 29 H 0.231 0.769 30 H 0.095 0.905 31 H -0.180 1.180 32 H -0.175 1.175 33 H 0.137 0.863 34 H 0.148 0.852 35 H 0.149 0.851 36 H 0.082 0.918 37 H 0.082 0.918 38 H 0.103 0.897 39 H 0.103 0.897 40 H 0.117 0.883 41 H 0.116 0.884 42 H 0.235 0.765 43 H 0.094 0.906 44 H 0.111 0.889 45 H 0.122 0.878 46 H 0.111 0.889 47 H 0.234 0.766 48 H 0.233 0.767 49 H 0.120 0.880 50 H 0.098 0.902 51 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 5.194 -0.235 0.138 5.201 hybrid contribution 0.760 -0.500 -0.972 1.331 sum 5.954 -0.735 -0.834 6.057 Atomic orbital electron populations 1.86502 1.17009 1.81855 1.49687 1.24734 0.85901 1.10498 0.97306 0.95360 0.80540 0.77817 0.87362 1.19135 0.96431 0.93204 0.94845 1.20771 1.02138 0.99317 0.95920 1.20847 0.97896 0.93843 0.96407 1.21289 1.03691 0.96352 1.01107 1.18998 0.94255 0.83497 0.94376 1.86082 1.70908 1.22288 1.43058 1.22827 0.98565 0.93932 0.86288 1.21228 1.03098 0.92255 0.97713 1.21528 1.03029 0.92840 1.00383 1.20578 0.79855 0.87960 0.81185 1.90758 1.36874 1.74728 1.38252 1.45678 1.53845 1.11847 1.25362 1.21829 0.95316 0.81573 1.00069 0.87522 1.23412 0.96192 1.03245 0.94483 1.22905 0.98684 0.98145 0.94425 0.88715 1.21922 0.96331 0.96493 0.83742 1.50600 1.17735 1.41327 1.07307 1.26131 0.99778 0.97753 0.80928 1.70563 1.04814 1.17243 1.34772 1.26077 0.99130 0.98857 0.86619 1.78097 0.98705 1.15549 1.21634 1.23349 0.98819 1.00988 0.94366 1.20248 1.02546 0.93917 0.97319 0.76922 0.90501 1.17989 1.17515 0.86333 0.85243 0.85103 0.91757 0.91762 0.89714 0.89735 0.88319 0.88353 0.76485 0.90571 0.88864 0.87753 0.88913 0.76579 0.76743 0.88045 0.90224 0.84573 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.57 12.74 -35.23 -0.45 -1.02 16 2 C -0.07 -0.06 2.81 36.01 0.10 0.04 16 3 Si 0.69 -0.41 29.79 -169.99 -5.06 -5.47 16 4 C -0.04 -0.12 5.42 -104.64 -0.57 -0.69 16 5 C -0.16 -0.50 8.67 -39.56 -0.34 -0.84 16 6 C -0.07 -0.14 10.04 -39.61 -0.40 -0.54 16 7 C -0.21 -0.40 9.04 -39.43 -0.36 -0.75 16 8 C 0.13 0.47 6.69 -39.21 -0.26 0.21 16 9 O -0.31 -1.02 10.14 -19.43 -0.20 -1.22 16 10 C 0.06 -0.01 4.74 37.16 0.18 0.16 16 11 C -0.11 0.00 4.87 -26.73 -0.13 -0.13 16 12 C -0.14 0.33 5.70 -27.89 -0.16 0.17 16 13 C 0.52 0.29 7.83 -10.99 -0.09 0.20 16 14 O -0.53 -2.74 15.58 5.56 0.09 -2.66 16 15 N -0.72 1.36 5.26 -53.02 -0.28 1.08 16 16 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 17 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 18 C -0.13 0.17 7.43 -25.92 -0.19 -0.02 16 19 C -0.12 0.42 3.73 -89.81 -0.34 0.08 16 20 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 21 C 0.14 -0.50 6.39 -4.04 -0.03 -0.53 16 22 N -0.38 0.13 3.69 -62.63 -0.23 -0.10 16 23 C 0.25 -0.12 12.63 -90.65 -1.14 -1.26 16 24 N -0.55 -1.41 11.19 -15.83 -0.18 -1.59 16 25 C 0.20 0.39 13.03 -91.81 -1.20 -0.80 16 26 N -0.31 -0.73 12.58 29.29 0.37 -0.36 16 27 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 28 C -0.12 -0.48 9.55 -39.43 -0.38 -0.86 16 29 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 30 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 31 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 32 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 33 H 0.12 0.27 4.87 -52.48 -0.26 0.02 16 34 H 0.13 -0.06 8.06 -52.48 -0.42 -0.48 16 35 H 0.13 -0.08 6.30 -52.48 -0.33 -0.41 16 36 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 37 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 38 H 0.08 0.15 8.10 -51.93 -0.42 -0.27 16 39 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 40 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 41 H 0.10 -0.40 8.14 -51.93 -0.42 -0.83 16 42 H 0.40 -1.79 8.70 -40.82 -0.36 -2.14 16 43 H 0.08 0.08 8.14 -51.93 -0.42 -0.35 16 44 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 45 H 0.10 -0.68 8.09 -51.93 -0.42 -1.10 16 46 H 0.09 -0.35 7.84 -51.93 -0.41 -0.76 16 47 H 0.22 -1.06 8.06 -52.49 -0.42 -1.48 16 48 H 0.22 -0.19 8.06 -52.49 -0.42 -0.61 16 49 H 0.10 -0.53 8.10 -51.93 -0.42 -0.96 16 50 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 51 H 0.14 0.49 8.06 -52.49 -0.42 0.07 16 LS Contribution 425.89 15.07 6.42 6.42 Total: 0.00 -13.39 425.89 -12.94 -26.33 By element: Atomic # 1 Polarization: -8.14 SS G_CDS: -7.64 Total: -15.78 kcal Atomic # 6 Polarization: 0.14 SS G_CDS: -5.78 Total: -5.63 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: -0.32 Total: -0.96 kcal Atomic # 8 Polarization: -4.34 SS G_CDS: -0.56 Total: -4.90 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: -5.06 Total: -5.47 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -13.39 -12.94 -26.33 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.777 kcal (2) G-P(sol) polarization free energy of solvation -13.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.389 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.331 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds