Wall clock time and date at job start Sun Mar 7 2021 04:42:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.38249 * 119.94432 * 244.72773 * 4 2 1 6 6 C 1.38165 * 120.05444 * 179.71989 * 5 4 2 7 7 C 1.38711 * 119.94530 * 0.55028 * 6 5 4 8 8 O 1.35900 * 120.05923 * 179.74517 * 7 6 5 9 9 C 1.42897 * 116.99739 * 359.97438 * 8 7 6 10 10 C 1.50693 * 109.47216 * 180.02562 * 9 8 7 11 11 O 1.21277 * 120.00030 * 359.97438 * 10 9 8 12 12 N 1.34781 * 120.00363 * 180.02562 * 10 9 8 13 13 C 1.46496 * 120.00390 * 179.97438 * 12 10 9 14 14 H 1.09006 * 112.84562 * 336.19204 * 13 12 10 15 15 C 1.53778 * 113.61771 * 107.49743 * 13 12 10 16 16 C 1.53774 * 87.08044 * 89.11559 * 15 13 12 17 17 H 1.09003 * 113.61733 * 270.88249 * 16 15 13 18 18 C 1.53006 * 113.69015 * 139.99338 * 16 15 13 19 19 N 1.46498 * 109.46912 * 87.46394 * 18 16 15 20 20 C 1.34432 * 126.81779 * 124.71421 * 19 18 16 21 21 N 1.30830 * 108.07408 * 179.89349 * 20 19 18 22 22 C 1.33244 * 109.83163 * 0.37812 * 21 20 19 23 23 N 1.30716 * 108.94562 * 359.76474 * 22 21 20 24 24 C 1.53773 * 113.61757 * 204.99831 * 13 12 10 25 25 C 1.38760 * 119.88618 * 359.72410 * 7 6 5 26 26 N 1.48004 * 120.02514 * 179.97438 * 25 7 6 27 27 O 1.21795 * 119.99541 * 180.02562 * 26 25 7 28 28 O 1.21802 * 119.99984 * 0.02562 * 26 25 7 29 29 C 1.38122 * 119.94618 * 0.02562 * 25 7 6 30 30 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 31 31 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 32 32 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 33 33 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 34 34 H 1.07998 * 119.97064 * 359.97438 * 5 4 2 35 35 H 1.08002 * 120.02939 * 180.29427 * 6 5 4 36 36 H 1.09003 * 109.47459 * 300.00051 * 9 8 7 37 37 H 1.09007 * 109.47291 * 59.99661 * 9 8 7 38 38 H 0.97000 * 119.99690 * 359.97438 * 12 10 9 39 39 H 1.09006 * 113.61687 * 203.67063 * 15 13 12 40 40 H 1.09006 * 113.61053 * 334.56629 * 15 13 12 41 41 H 1.08997 * 109.47054 * 207.46748 * 18 16 15 42 42 H 1.08999 * 109.46992 * 327.46943 * 18 16 15 43 43 H 1.08003 * 125.96604 * 0.03640 * 20 19 18 44 44 H 1.08000 * 125.53181 * 179.79845 * 22 21 20 45 45 H 1.08997 * 113.61649 * 25.42725 * 24 13 12 46 46 H 1.08998 * 113.61884 * 156.24839 * 24 13 12 47 47 H 1.08000 * 119.97515 * 180.02562 * 29 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6435 -0.0124 2.1879 6 6 3.1002 -0.6601 3.3196 7 6 2.8534 -2.0145 3.4893 8 8 3.3059 -2.6551 4.5991 9 6 4.0296 -1.8719 5.5504 10 6 4.4490 -2.7451 6.7048 11 8 4.1565 -3.9220 6.7124 12 7 5.1482 -2.2178 7.7294 13 6 5.5554 -3.0665 8.8519 14 1 4.9234 -3.9471 8.9677 15 6 7.0609 -3.3793 8.8733 16 6 7.2349 -2.0998 9.7083 17 1 7.3911 -1.2039 9.1072 18 6 8.2526 -2.2393 10.8422 19 7 9.5915 -1.9239 10.3382 20 6 10.4419 -1.0061 10.8299 21 7 11.5305 -1.0317 10.1047 22 6 11.4097 -1.9430 9.1401 23 7 10.2393 -2.5160 9.2417 24 6 5.7778 -2.2914 10.1612 25 6 2.1432 -2.7141 2.5241 26 7 1.8786 -4.1595 2.7018 27 8 1.2556 -4.7731 1.8540 28 8 2.2839 -4.7351 3.6957 29 6 1.6843 -2.0609 1.3970 30 1 -0.3934 0.4417 -0.7651 31 1 1.7923 -0.5139 -0.8900 32 1 1.5879 2.4585 -1.2243 33 1 1.5615 2.4679 1.2085 34 1 2.8395 1.0411 2.0531 35 1 3.6524 -0.1133 4.0696 36 1 4.9146 -1.4491 5.0749 37 1 3.3936 -1.0658 5.9164 38 1 5.3818 -1.2764 7.7235 39 1 7.3097 -4.2917 9.4153 40 1 7.5316 -3.3274 7.8914 41 1 7.9959 -1.5510 11.6475 42 1 8.2380 -3.2617 11.2197 43 1 10.2593 -0.3618 11.6772 44 1 12.1578 -2.1717 8.3955 45 1 5.2127 -1.3612 10.2193 46 1 5.6744 -2.9060 11.0555 47 1 1.1312 -2.6049 0.6457 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_4549638.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:38 Heat of formation + Delta-G solvation = 64.401773 kcal Electronic energy + Delta-G solvation = -35063.613869 eV Core-core repulsion = 30028.021708 eV Total energy + Delta-G solvation = -5035.592161 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.146 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.03198 -42.99654 -41.82267 -41.25655 -39.99922 -39.09038 -37.68366 -37.10678 -35.54924 -34.09176 -33.48422 -32.47774 -32.16313 -30.36980 -28.91750 -27.56662 -26.96065 -26.70342 -24.87548 -24.02146 -22.93349 -22.74231 -22.49089 -22.09995 -20.60901 -20.34147 -19.44932 -19.08636 -18.82628 -18.64616 -18.30825 -18.25770 -17.68042 -17.53448 -17.07937 -16.87307 -16.65392 -16.28277 -16.07211 -15.85620 -15.76422 -15.55559 -15.31553 -15.18388 -14.81008 -14.54494 -14.33218 -14.26199 -14.01508 -13.86110 -13.68074 -13.26131 -13.21870 -12.99683 -12.87663 -12.50202 -12.42706 -12.18080 -12.05795 -11.88783 -11.79382 -11.71561 -11.50625 -11.02360 -10.95874 -10.90888 -10.79077 -10.76812 -10.65763 -10.26526 -9.88460 -5.24542 -1.09852 -0.34973 0.40876 0.55322 0.64598 0.97781 1.05553 1.27053 1.32924 1.36330 1.68881 1.93761 2.02137 2.14532 2.88865 3.02751 3.05230 3.10396 3.19376 3.35508 3.36517 3.38758 3.43144 3.51748 3.54549 3.56321 3.64629 3.73022 3.79527 3.89620 3.93936 4.04434 4.15343 4.17052 4.30135 4.34656 4.42478 4.45587 4.50302 4.59767 4.73067 4.74250 4.88161 4.94497 4.95519 5.25008 5.34337 5.45530 5.46090 5.72391 5.77860 6.18261 6.18615 6.96313 6.98469 7.11314 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.074 4.074 3 Si 0.686 3.314 4 C -0.109 4.109 5 C -0.023 4.023 6 C -0.209 4.209 7 C 0.200 3.800 8 O -0.253 6.253 9 C 0.031 3.969 10 C 0.517 3.483 11 O -0.492 6.492 12 N -0.711 5.711 13 C 0.121 3.879 14 H 0.110 0.890 15 C -0.134 4.134 16 C -0.123 4.123 17 H 0.095 0.905 18 C 0.137 3.863 19 N -0.379 5.379 20 C 0.251 3.749 21 N -0.547 5.547 22 C 0.196 3.804 23 N -0.312 5.312 24 C -0.136 4.136 25 C -0.075 4.075 26 N 0.029 4.971 27 O -0.178 6.178 28 O -0.118 6.118 29 C 0.010 3.990 30 H 0.385 0.615 31 H 0.085 0.915 32 H -0.255 1.255 33 H -0.251 1.251 34 H 0.149 0.851 35 H 0.157 0.843 36 H 0.103 0.897 37 H 0.102 0.898 38 H 0.401 0.599 39 H 0.095 0.905 40 H 0.077 0.923 41 H 0.104 0.896 42 H 0.093 0.907 43 H 0.218 0.782 44 H 0.216 0.784 45 H 0.080 0.920 46 H 0.103 0.897 47 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.551 10.419 2.124 10.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.184 4.184 3 Si 0.586 3.414 4 C -0.110 4.110 5 C -0.040 4.040 6 C -0.228 4.228 7 C 0.150 3.850 8 O -0.162 6.162 9 C -0.047 4.047 10 C 0.300 3.700 11 O -0.363 6.363 12 N -0.365 5.365 13 C 0.015 3.985 14 H 0.128 0.872 15 C -0.173 4.173 16 C -0.142 4.142 17 H 0.113 0.887 18 C 0.015 3.985 19 N -0.170 5.170 20 C -0.046 4.046 21 N -0.274 5.274 22 C -0.107 4.107 23 N -0.139 5.139 24 C -0.174 4.174 25 C -0.159 4.159 26 N 0.549 4.451 27 O -0.386 6.386 28 O -0.342 6.342 29 C -0.009 4.009 30 H 0.234 0.766 31 H 0.102 0.898 32 H -0.179 1.179 33 H -0.176 1.176 34 H 0.167 0.833 35 H 0.174 0.826 36 H 0.121 0.879 37 H 0.120 0.880 38 H 0.236 0.764 39 H 0.113 0.887 40 H 0.096 0.904 41 H 0.123 0.877 42 H 0.111 0.889 43 H 0.234 0.766 44 H 0.232 0.768 45 H 0.098 0.902 46 H 0.121 0.879 47 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 2.230 10.140 2.200 10.613 hybrid contribution -1.045 0.382 -0.269 1.144 sum 1.185 10.522 1.932 10.763 Atomic orbital electron populations 1.86588 1.17280 1.80294 1.50126 1.24769 0.84999 1.11210 0.97373 0.95179 0.91202 0.73949 0.81057 1.19130 1.01866 0.92580 0.97472 1.21237 0.91707 1.00222 0.90880 1.21233 1.07873 0.92038 1.01653 1.18672 0.89941 0.90861 0.85535 1.86498 1.66832 1.35543 1.27374 1.22710 0.98029 0.94317 0.89688 1.19809 0.78669 0.88544 0.82939 1.90871 1.52444 1.15686 1.77337 1.45426 1.57122 1.13150 1.20823 1.21857 0.96657 0.94790 0.85148 0.87190 1.23423 0.95184 0.97271 1.01412 1.22917 0.93896 1.00326 0.97041 0.88699 1.21923 0.76732 1.03506 0.96358 1.50603 1.14962 1.28455 1.22974 1.26131 0.86126 0.93021 0.99314 1.70567 1.24502 1.23761 1.08547 1.26080 0.94634 0.92212 0.97762 1.78102 1.09229 1.21742 1.04861 1.23355 0.94674 1.01614 0.97794 1.20544 1.12851 0.82506 1.00041 1.43322 0.98964 1.02421 1.00375 1.94549 1.39634 1.66243 1.38204 1.94696 1.51937 1.69136 1.18411 1.20811 0.92248 0.93965 0.93855 0.76587 0.89755 1.17915 1.17604 0.83347 0.82562 0.87947 0.88027 0.76450 0.88658 0.90447 0.87741 0.88856 0.76596 0.76751 0.90159 0.87851 0.81948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.37 12.81 -35.23 -0.45 -0.08 16 2 C -0.07 0.18 2.79 36.01 0.10 0.28 16 3 Si 0.69 -2.49 29.84 -169.99 -5.07 -7.57 16 4 C -0.11 0.11 5.39 -104.60 -0.56 -0.46 16 5 C -0.02 0.06 8.66 -39.60 -0.34 -0.28 16 6 C -0.21 0.56 9.04 -39.43 -0.36 0.21 16 7 C 0.20 0.23 6.67 -39.21 -0.26 -0.03 16 8 O -0.25 -0.61 7.68 -49.78 -0.38 -0.99 16 9 C 0.03 -0.08 5.22 36.00 0.19 0.11 16 10 C 0.52 0.21 7.91 -10.99 -0.09 0.12 16 11 O -0.49 -2.97 16.10 -14.35 -0.23 -3.21 16 12 N -0.71 2.09 5.26 -53.02 -0.28 1.81 16 13 C 0.12 -0.29 4.32 -67.13 -0.29 -0.58 16 14 H 0.11 -0.02 7.46 -51.93 -0.39 -0.41 16 15 C -0.13 0.28 7.43 -25.92 -0.19 0.08 16 16 C -0.12 0.53 3.72 -89.81 -0.33 0.19 16 17 H 0.09 -0.36 8.14 -51.93 -0.42 -0.79 16 18 C 0.14 -0.59 6.39 -4.04 -0.03 -0.62 16 19 N -0.38 0.38 3.69 -62.63 -0.23 0.14 16 20 C 0.25 -0.26 12.63 -90.65 -1.14 -1.41 16 21 N -0.55 -1.11 11.19 -15.83 -0.18 -1.28 16 22 C 0.20 0.28 13.03 -91.81 -1.20 -0.91 16 23 N -0.31 -0.53 12.57 29.29 0.37 -0.16 16 24 C -0.14 0.71 7.39 -25.92 -0.19 0.52 16 25 C -0.07 -0.25 6.87 -79.80 -0.55 -0.80 16 26 N 0.03 0.20 4.45 34.03 0.15 0.35 16 27 O -0.18 -1.34 18.45 -29.46 -0.54 -1.88 16 28 O -0.12 -1.04 17.24 -36.49 -0.63 -1.67 16 29 C 0.01 0.01 9.19 -39.60 -0.36 -0.35 16 30 H 0.39 -1.76 8.74 45.56 0.40 -1.37 16 31 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 32 H -0.25 0.30 7.11 56.52 0.40 0.70 16 33 H -0.25 0.27 7.05 56.52 0.40 0.67 16 34 H 0.15 -0.80 4.86 -52.49 -0.26 -1.06 16 35 H 0.16 -1.02 6.30 -52.49 -0.33 -1.35 16 36 H 0.10 -0.58 7.66 -51.93 -0.40 -0.98 16 37 H 0.10 -0.58 7.66 -51.93 -0.40 -0.97 16 38 H 0.40 -2.47 8.70 -40.82 -0.36 -2.82 16 39 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 40 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 41 H 0.10 -0.75 8.09 -51.93 -0.42 -1.16 16 42 H 0.09 -0.40 7.85 -51.93 -0.41 -0.81 16 43 H 0.22 -1.17 8.06 -52.48 -0.42 -1.60 16 44 H 0.22 -0.30 8.06 -52.49 -0.42 -0.72 16 45 H 0.08 -0.47 8.14 -51.93 -0.42 -0.90 16 46 H 0.10 -0.62 8.10 -51.93 -0.42 -1.04 16 47 H 0.16 0.15 7.61 -52.49 -0.40 -0.25 16 LS Contribution 409.53 15.07 6.17 6.17 Total: 0.00 -16.45 409.53 -12.43 -28.88 By element: Atomic # 1 Polarization: -11.09 SS G_CDS: -5.51 Total: -16.60 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -5.61 Total: -3.92 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -0.17 Total: 0.87 kcal Atomic # 8 Polarization: -5.59 SS G_CDS: -2.24 Total: -7.83 kcal Atomic # 14 Polarization: -2.49 SS G_CDS: -5.07 Total: -7.57 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -16.45 -12.43 -28.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4549638.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.278 kcal (2) G-P(sol) polarization free energy of solvation -16.449 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 76.829 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.876 kcal (6) G-S(sol) free energy of system = (1) + (5) 64.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds