Wall clock time and date at job start Sun Mar 7 2021 04:42:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86303 * 109.46551 * 2 1 4 4 C 1.50701 * 109.47266 * 119.99652 * 2 1 3 5 5 C 1.38237 * 119.97162 * 244.98279 * 4 2 1 6 6 C 1.38293 * 120.11213 * 180.02562 * 5 4 2 7 7 C 1.38127 * 120.05123 * 359.76546 * 6 5 4 8 8 C 1.38753 * 119.94121 * 0.50843 * 7 6 5 9 9 O 1.35903 * 120.04896 * 179.74120 * 8 7 6 10 10 C 1.42897 * 117.00379 * 359.72759 * 9 8 7 11 11 C 1.50702 * 109.47128 * 179.97438 * 10 9 8 12 12 O 1.21278 * 119.99935 * 0.02562 * 11 10 9 13 13 N 1.34776 * 119.99614 * 179.97438 * 11 10 9 14 14 C 1.46504 * 119.99859 * 180.02562 * 13 11 10 15 15 H 1.09007 * 112.84867 * 336.20217 * 14 13 11 16 16 C 1.53777 * 113.69118 * 107.46470 * 14 13 11 17 17 C 1.53783 * 87.08089 * 89.12976 * 16 14 13 18 18 H 1.08996 * 113.69271 * 270.87507 * 17 16 14 19 19 C 1.53001 * 113.61626 * 139.97923 * 17 16 14 20 20 N 1.46506 * 109.46688 * 87.50545 * 19 17 16 21 21 C 1.34424 * 126.82028 * 125.00386 * 20 19 17 22 22 N 1.30835 * 108.07649 * 179.97438 * 21 20 19 23 23 C 1.33238 * 109.83029 * 0.02562 * 22 21 20 24 24 N 1.30712 * 108.94316 * 359.75029 * 23 22 21 25 25 C 1.53775 * 113.61690 * 205.00502 * 14 13 11 26 26 C 1.38164 * 119.96882 * 65.00225 * 4 2 1 27 27 H 0.96695 * 114.00052 * 299.99372 * 1 2 3 28 28 H 1.08999 * 109.47049 * 240.00233 * 2 1 3 29 29 H 1.48504 * 110.00275 * 299.99571 * 3 2 1 30 30 H 1.48494 * 110.00287 * 61.32071 * 3 2 1 31 31 H 1.08000 * 119.94667 * 0.02562 * 5 4 2 32 32 H 1.07997 * 119.97161 * 180.02562 * 6 5 4 33 33 H 1.08004 * 120.02595 * 180.27437 * 7 6 5 34 34 H 1.08997 * 109.47138 * 59.99973 * 10 9 8 35 35 H 1.08998 * 109.47542 * 299.99747 * 10 9 8 36 36 H 0.96997 * 120.00616 * 0.02562 * 13 11 10 37 37 H 1.09003 * 113.61810 * 334.58497 * 16 14 13 38 38 H 1.08998 * 113.61705 * 203.67534 * 16 14 13 39 39 H 1.08999 * 109.47230 * 327.50630 * 19 17 16 40 40 H 1.09000 * 109.47236 * 207.50225 * 19 17 16 41 41 H 1.07996 * 125.96633 * 359.92153 * 21 20 19 42 42 H 1.07993 * 125.52851 * 180.02562 * 23 22 21 43 43 H 1.09007 * 113.61556 * 156.25298 * 25 14 13 44 44 H 1.08997 * 113.69712 * 25.35774 * 25 14 13 45 45 H 1.08003 * 120.03016 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.6391 -0.0116 2.1907 6 6 3.1019 -0.6607 3.3207 7 6 2.8537 -2.0083 3.4949 8 6 2.1486 -2.7130 2.5298 9 8 1.9077 -4.0401 2.6964 10 6 2.4149 -4.6471 3.8864 11 6 2.0530 -6.1100 3.8975 12 8 1.4233 -6.5859 2.9768 13 7 2.4302 -6.8896 4.9302 14 6 2.0789 -8.3119 4.9409 15 1 1.2070 -8.5371 4.3266 16 6 3.2731 -9.2452 4.6810 17 6 3.5088 -9.2377 6.2007 18 1 4.1625 -8.4335 6.5385 19 6 3.9053 -10.6029 6.7662 20 7 5.3593 -10.7620 6.6837 21 6 6.1965 -11.0534 7.6942 22 7 7.4114 -11.1088 7.2118 23 6 7.3899 -10.8589 5.9032 24 7 6.1549 -10.6453 5.5322 25 6 2.0119 -8.9194 6.3519 26 6 1.6846 -2.0594 1.3977 27 1 -0.3933 0.4416 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 1.5614 2.4680 -1.2086 30 1 1.5878 2.4586 1.2242 31 1 2.8308 1.0429 2.0582 32 1 3.6541 -0.1125 4.0697 33 1 3.2115 -2.5138 4.3797 34 1 1.9787 -4.1587 4.7577 35 1 3.4993 -4.5406 3.9150 36 1 2.9342 -6.5091 5.6665 37 1 4.0770 -8.7778 4.1122 38 1 2.9873 -10.2210 4.2884 39 1 3.4203 -11.3901 6.1890 40 1 3.5910 -10.6699 7.8078 41 1 5.9156 -11.2129 8.7247 42 1 8.2524 -10.8407 5.2536 43 1 1.3812 -9.8062 6.4161 44 1 1.7973 -8.1901 7.1331 45 1 1.1323 -2.6050 0.6469 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:52 Heat of formation + Delta-G solvation = 55.594213 kcal Electronic energy + Delta-G solvation = -28454.895712 eV Core-core repulsion = 24249.938062 eV Total energy + Delta-G solvation = -4204.957650 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -43.02489 -41.71620 -41.12443 -39.77740 -38.80300 -37.30372 -35.53826 -34.05678 -32.53286 -32.15683 -31.71066 -29.87469 -28.69441 -26.96031 -26.82649 -24.74216 -23.72796 -22.92804 -22.91006 -22.46130 -21.73533 -20.54683 -19.38871 -18.70132 -18.30433 -17.73631 -17.53874 -17.38760 -17.11722 -16.93189 -16.70495 -16.20056 -16.18660 -15.75183 -15.66297 -15.37384 -15.22425 -15.02033 -14.82542 -14.69665 -14.25395 -14.13833 -13.96812 -13.75741 -13.55395 -13.20951 -13.02749 -12.98277 -12.60479 -12.43504 -12.20933 -11.99852 -11.88281 -11.58968 -11.50528 -10.98319 -10.95183 -10.76134 -10.65285 -10.63664 -10.25663 -9.98287 -9.30906 -4.96031 0.16088 0.36685 0.65283 1.22760 1.27516 1.37638 1.40009 1.59071 1.95697 2.02879 2.46418 2.62329 3.03839 3.19582 3.34982 3.36471 3.39195 3.39890 3.54665 3.60022 3.69774 3.77806 3.83280 3.84840 3.90161 3.94577 3.97244 4.15345 4.15725 4.32472 4.35167 4.42676 4.49751 4.51089 4.59111 4.62662 4.74842 4.89085 4.93100 4.95098 5.19286 5.25862 5.31345 5.36421 5.40408 5.46269 5.60948 5.78482 6.16083 6.31403 6.40537 7.00654 7.11990 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.527 6.527 2 C -0.078 4.078 3 Si 0.692 3.308 4 C -0.077 4.077 5 C -0.155 4.155 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.519 3.481 12 O -0.508 6.508 13 N -0.711 5.711 14 C 0.120 3.880 15 H 0.109 0.891 16 C -0.134 4.134 17 C -0.123 4.123 18 H 0.095 0.905 19 C 0.137 3.863 20 N -0.379 5.379 21 C 0.251 3.749 22 N -0.547 5.547 23 C 0.196 3.804 24 N -0.312 5.312 25 C -0.136 4.136 26 C -0.120 4.120 27 H 0.376 0.624 28 H 0.121 0.879 29 H -0.257 1.257 30 H -0.260 1.260 31 H 0.130 0.870 32 H 0.131 0.869 33 H 0.129 0.871 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.402 0.598 37 H 0.077 0.923 38 H 0.095 0.905 39 H 0.093 0.907 40 H 0.105 0.895 41 H 0.218 0.782 42 H 0.216 0.784 43 H 0.103 0.897 44 H 0.080 0.920 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.751 1.032 7.246 7.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.187 4.187 3 Si 0.593 3.407 4 C -0.078 4.078 5 C -0.173 4.173 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.083 3.917 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.304 3.696 12 O -0.381 6.381 13 N -0.365 5.365 14 C 0.015 3.985 15 H 0.127 0.873 16 C -0.173 4.173 17 C -0.142 4.142 18 H 0.113 0.887 19 C 0.015 3.985 20 N -0.170 5.170 21 C -0.046 4.046 22 N -0.274 5.274 23 C -0.107 4.107 24 N -0.140 5.140 25 C -0.174 4.174 26 C -0.138 4.138 27 H 0.224 0.776 28 H 0.138 0.862 29 H -0.182 1.182 30 H -0.185 1.185 31 H 0.147 0.853 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.236 0.764 37 H 0.095 0.905 38 H 0.113 0.887 39 H 0.111 0.889 40 H 0.123 0.877 41 H 0.234 0.766 42 H 0.233 0.767 43 H 0.121 0.879 44 H 0.099 0.901 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.034 1.171 5.316 5.541 hybrid contribution -0.692 -0.077 1.503 1.657 sum 0.343 1.094 6.819 6.915 Atomic orbital electron populations 1.86626 1.17475 1.79991 1.49242 1.25110 0.84139 1.11189 0.98294 0.94866 0.91623 0.74090 0.80119 1.20090 0.97769 0.93499 0.96437 1.20997 1.01214 1.00013 0.95032 1.20907 0.97575 0.93573 0.97027 1.21298 1.04763 0.96085 1.00291 1.19040 0.95444 0.82387 0.94797 1.86173 1.73716 1.20119 1.40023 1.22442 1.00711 0.91756 0.88849 1.20032 0.79671 0.87428 0.82502 1.90796 1.37842 1.74745 1.34690 1.45453 1.58311 1.09207 1.23497 1.21848 0.99215 0.79512 0.97955 0.87339 1.23422 0.98358 1.00467 0.95068 1.22915 0.96966 0.96437 0.97861 0.88658 1.21921 0.74520 0.98583 1.03474 1.50598 1.08539 1.51893 1.05963 1.26130 0.85579 0.96311 0.96562 1.70567 1.21802 1.24758 1.10240 1.26076 0.95379 0.97637 0.91572 1.78096 1.03536 1.25476 1.06871 1.23356 0.95286 1.01909 0.96895 1.20285 1.02749 0.93649 0.97167 0.77627 0.86153 1.18184 1.18515 0.85275 0.85095 0.85282 0.88748 0.88686 0.76365 0.90458 0.88692 0.88888 0.87728 0.76585 0.76743 0.87886 0.90121 0.84603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.01 12.83 -35.23 -0.45 -1.46 16 2 C -0.08 -0.02 2.80 36.01 0.10 0.08 16 3 Si 0.69 -0.61 29.88 -169.99 -5.08 -5.69 16 4 C -0.08 -0.06 5.35 -104.65 -0.56 -0.62 16 5 C -0.15 0.06 8.67 -39.56 -0.34 -0.28 16 6 C -0.07 0.07 10.04 -39.60 -0.40 -0.33 16 7 C -0.21 0.08 9.04 -39.43 -0.36 -0.28 16 8 C 0.13 0.25 6.69 -39.22 -0.26 -0.01 16 9 O -0.29 -0.87 9.67 -39.35 -0.38 -1.25 16 10 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 11 C 0.52 0.60 7.91 -10.98 -0.09 0.52 16 12 O -0.51 -3.20 16.10 -14.35 -0.23 -3.43 16 13 N -0.71 1.56 5.27 -53.02 -0.28 1.28 16 14 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 15 H 0.11 0.01 7.47 -51.93 -0.39 -0.38 16 16 C -0.13 0.23 7.43 -25.92 -0.19 0.04 16 17 C -0.12 0.48 3.74 -89.80 -0.34 0.14 16 18 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 19 C 0.14 -0.56 6.39 -4.04 -0.03 -0.59 16 20 N -0.38 0.28 3.69 -62.63 -0.23 0.05 16 21 C 0.25 -0.20 12.63 -90.66 -1.14 -1.35 16 22 N -0.55 -1.24 11.19 -15.84 -0.18 -1.42 16 23 C 0.20 0.33 13.03 -91.82 -1.20 -0.86 16 24 N -0.31 -0.61 12.57 29.29 0.37 -0.25 16 25 C -0.14 0.66 7.39 -25.92 -0.19 0.47 16 26 C -0.12 -0.28 9.62 -39.44 -0.38 -0.66 16 27 H 0.38 -0.39 8.70 45.56 0.40 0.00 16 28 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 29 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 30 H -0.26 -0.21 7.01 56.52 0.40 0.18 16 31 H 0.13 -0.26 4.84 -52.49 -0.25 -0.52 16 32 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 33 H 0.13 -0.39 6.30 -52.48 -0.33 -0.72 16 34 H 0.09 -0.34 7.65 -51.93 -0.40 -0.74 16 35 H 0.10 -0.32 7.67 -51.93 -0.40 -0.72 16 36 H 0.40 -2.08 8.70 -40.82 -0.36 -2.44 16 37 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 39 H 0.09 -0.39 7.84 -51.93 -0.41 -0.79 16 40 H 0.10 -0.72 8.09 -51.93 -0.42 -1.14 16 41 H 0.22 -1.13 8.06 -52.49 -0.42 -1.55 16 42 H 0.22 -0.25 8.06 -52.49 -0.42 -0.67 16 43 H 0.10 -0.59 8.10 -51.93 -0.42 -1.01 16 44 H 0.08 -0.44 8.14 -51.93 -0.42 -0.87 16 45 H 0.14 0.40 8.06 -52.48 -0.42 -0.02 16 LS Contribution 383.44 15.07 5.78 5.78 Total: 0.00 -12.98 383.44 -12.12 -25.10 By element: Atomic # 1 Polarization: -8.63 SS G_CDS: -5.96 Total: -14.60 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -5.47 Total: -4.12 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: -0.32 Total: -0.33 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: -1.06 Total: -6.15 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.08 Total: -5.69 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -12.98 -12.12 -25.10 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.691 kcal (2) G-P(sol) polarization free energy of solvation -12.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.117 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.097 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds