Wall clock time and date at job start Sun Mar 7 2021 04:42:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35982 * 117.00132 * 2 1 4 4 C 1.38682 * 120.00190 * 180.02562 * 3 2 1 5 5 C 1.38149 * 119.99798 * 180.02562 * 4 3 2 6 6 C 1.50705 * 120.00055 * 179.97438 * 5 4 3 7 7 O 1.42908 * 109.46603 * 255.00069 * 6 5 4 8 8 Si 1.86298 * 109.46780 * 14.99368 * 6 5 4 9 9 C 1.38684 * 120.00226 * 0.25280 * 5 4 3 10 10 O 1.35986 * 119.99743 * 179.72718 * 9 5 4 11 11 C 1.42905 * 116.99449 * 180.02562 * 10 9 5 12 12 C 1.50702 * 109.46779 * 180.02562 * 11 10 9 13 13 O 1.21281 * 119.99904 * 0.02562 * 12 11 10 14 14 N 1.34780 * 119.99678 * 180.02562 * 12 11 10 15 15 C 1.46496 * 119.99696 * 180.02562 * 14 12 11 16 16 H 1.09007 * 112.85219 * 334.66069 * 15 14 12 17 17 C 1.53777 * 113.62010 * 105.85897 * 15 14 12 18 18 C 1.54059 * 86.98370 * 89.15984 * 17 15 14 19 19 H 1.09004 * 113.68606 * 270.87466 * 18 17 15 20 20 C 1.52994 * 113.61654 * 139.98281 * 18 17 15 21 21 N 1.46500 * 109.47528 * 87.50847 * 20 18 17 22 22 C 1.34422 * 126.82864 * 124.70375 * 21 20 18 23 23 N 1.30828 * 108.07977 * 179.89552 * 22 21 20 24 24 C 1.33244 * 109.82997 * 0.38316 * 23 22 21 25 25 N 1.30716 * 108.94277 * 359.75816 * 24 23 22 26 26 C 1.53776 * 87.07678 * 25.43405 * 18 17 15 27 27 C 1.38719 * 119.99786 * 359.47418 * 9 5 4 28 28 C 1.38112 * 119.99801 * 0.54476 * 27 9 5 29 29 H 1.09006 * 109.46831 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47131 * 299.99574 * 1 2 3 31 31 H 1.08996 * 109.46980 * 60.00055 * 1 2 3 32 32 H 1.07995 * 120.00037 * 0.04400 * 4 3 2 33 33 H 1.08991 * 109.47403 * 134.99585 * 6 5 4 34 34 H 0.96700 * 113.99903 * 299.99099 * 7 6 5 35 35 H 1.48506 * 109.99834 * 60.00830 * 8 6 5 36 36 H 1.48502 * 110.00011 * 181.32094 * 8 6 5 37 37 H 1.09002 * 109.47042 * 300.00175 * 11 10 9 38 38 H 1.09002 * 109.47314 * 60.00028 * 11 10 9 39 39 H 0.96993 * 120.00050 * 359.97438 * 14 12 11 40 40 H 1.08994 * 113.61956 * 203.66488 * 17 15 14 41 41 H 1.09001 * 113.61272 * 334.57046 * 17 15 14 42 42 H 1.09006 * 109.46862 * 207.50533 * 20 18 17 43 43 H 1.08998 * 109.47663 * 327.50391 * 20 18 17 44 44 H 1.08007 * 125.95820 * 0.04383 * 22 21 20 45 45 H 1.07996 * 125.52739 * 179.80310 * 24 23 22 46 46 H 1.09003 * 113.61437 * 220.02524 * 26 18 17 47 47 H 1.08998 * 113.69247 * 89.12510 * 26 18 17 48 48 H 1.07997 * 120.00252 * 180.27705 * 27 9 5 49 49 H 1.08005 * 119.99671 * 179.72643 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5151 0.0000 6 6 5.5633 2.5941 0.0000 7 8 6.0207 2.9667 1.3016 8 14 6.2723 0.9325 -0.4552 9 6 3.3030 3.6782 0.0064 10 8 3.9205 4.8898 0.0125 11 6 3.0804 6.0459 0.0194 12 6 3.9347 7.2874 0.0249 13 8 5.1437 7.1916 0.0226 14 7 3.3550 8.5041 0.0324 15 6 4.1854 9.7110 0.0372 16 1 5.1741 9.5429 0.4643 17 6 4.2148 10.4440 -1.3144 18 6 2.9813 11.2263 -0.8248 19 1 2.0335 10.7436 -1.0637 20 6 3.0054 12.7084 -1.2037 21 7 2.4130 12.8826 -2.5322 22 6 1.3884 13.6895 -2.8580 23 7 1.1620 13.5606 -4.1401 24 6 2.0125 12.6782 -4.6628 25 7 2.7988 12.2351 -3.7172 26 6 3.4708 10.9482 0.6062 27 6 1.9178 3.6056 0.0012 28 6 1.2908 2.3750 0.0010 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3633 0.5137 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 4.0194 0.3785 -0.0017 33 1 5.8881 3.3390 -0.7263 34 1 5.6901 3.8235 1.6043 35 1 5.8041 0.5336 -1.8069 36 1 7.7560 0.9885 -0.4277 37 1 2.4505 6.0426 -0.8701 38 1 2.4518 6.0329 0.9098 39 1 2.3881 8.5807 0.0339 40 1 5.0989 11.0659 -1.4547 41 1 4.0124 9.7958 -2.1671 42 1 2.4328 13.2795 -0.4728 43 1 4.0358 13.0636 -1.2159 44 1 0.8481 14.3337 -2.1801 45 1 2.0471 12.3782 -5.6997 46 1 2.6681 10.7067 1.3030 47 1 4.1518 11.7070 0.9914 48 1 1.3295 4.5113 0.0016 49 1 0.2122 2.3185 0.0015 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:55 Heat of formation + Delta-G solvation = 16.691912 kcal Electronic energy + Delta-G solvation = -33304.515611 eV Core-core repulsion = 28623.651219 eV Total energy + Delta-G solvation = -4680.864391 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.98440 -41.89994 -41.30550 -40.19270 -39.38122 -38.11655 -36.95573 -35.47867 -34.02555 -32.83920 -32.16209 -31.11444 -29.83985 -28.65637 -27.94811 -26.75073 -26.61909 -24.74107 -23.74303 -22.86224 -22.44621 -22.41280 -21.98516 -20.41462 -19.56507 -18.85930 -18.59116 -18.22209 -18.04089 -17.59745 -17.44210 -17.02032 -16.77962 -16.62288 -16.18397 -16.12547 -15.78120 -15.68516 -15.49302 -15.47878 -15.20179 -15.07100 -14.69646 -14.49027 -14.22833 -14.14204 -14.02936 -13.57944 -13.55706 -13.43393 -13.13958 -13.06791 -12.84820 -12.55266 -12.32759 -12.22205 -12.05145 -11.77432 -11.47677 -11.33977 -11.28776 -11.26962 -11.06968 -10.97360 -10.79709 -10.56825 -10.21353 -10.12489 -8.85214 -4.95833 0.03678 0.30351 0.70776 1.31134 1.34243 1.38489 1.46465 1.56146 1.89382 2.00864 2.32649 2.50503 2.52905 3.28293 3.41806 3.43134 3.51231 3.53559 3.63150 3.69851 3.73881 3.82830 3.89166 3.94753 4.02071 4.06273 4.09890 4.11843 4.18504 4.21528 4.25145 4.42641 4.43374 4.43671 4.57622 4.64089 4.67679 4.73997 4.78301 4.80407 4.94516 4.96195 5.00859 5.09388 5.10365 5.17920 5.31844 5.38568 5.45206 5.50175 5.95721 6.08626 6.34846 6.42590 6.49355 7.04179 7.13818 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.082 4.082 7 O -0.544 6.544 8 Si 0.812 3.188 9 C 0.088 3.912 10 O -0.316 6.316 11 C 0.039 3.961 12 C 0.515 3.485 13 O -0.569 6.569 14 N -0.693 5.693 15 C 0.109 3.891 16 H 0.082 0.918 17 C -0.140 4.140 18 C -0.108 4.108 19 H 0.094 0.906 20 C 0.129 3.871 21 N -0.378 5.378 22 C 0.257 3.743 23 N -0.586 5.586 24 C 0.183 3.817 25 N -0.345 5.345 26 C -0.111 4.111 27 C -0.160 4.160 28 C -0.161 4.161 29 H 0.115 0.885 30 H 0.068 0.932 31 H 0.065 0.935 32 H 0.153 0.847 33 H 0.060 0.940 34 H 0.372 0.628 35 H -0.265 1.265 36 H -0.294 1.294 37 H 0.118 0.882 38 H 0.129 0.871 39 H 0.419 0.581 40 H 0.088 0.912 41 H 0.047 0.953 42 H 0.145 0.855 43 H 0.093 0.907 44 H 0.260 0.740 45 H 0.227 0.773 46 H 0.100 0.900 47 H 0.118 0.882 48 H 0.166 0.834 49 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.599 3.749 5.427 12.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.119 4.119 6 C -0.189 4.189 7 O -0.350 6.350 8 Si 0.714 3.286 9 C 0.044 3.956 10 O -0.230 6.230 11 C -0.039 4.039 12 C 0.301 3.699 13 O -0.447 6.447 14 N -0.347 5.347 15 C 0.004 3.996 16 H 0.101 0.899 17 C -0.179 4.179 18 C -0.128 4.128 19 H 0.112 0.888 20 C 0.009 3.991 21 N -0.168 5.168 22 C -0.039 4.039 23 N -0.314 5.314 24 C -0.120 4.120 25 N -0.173 5.173 26 C -0.150 4.150 27 C -0.178 4.178 28 C -0.180 4.180 29 H 0.133 0.867 30 H 0.086 0.914 31 H 0.084 0.916 32 H 0.170 0.830 33 H 0.078 0.922 34 H 0.220 0.780 35 H -0.190 1.190 36 H -0.221 1.221 37 H 0.136 0.864 38 H 0.147 0.853 39 H 0.257 0.743 40 H 0.106 0.894 41 H 0.066 0.934 42 H 0.163 0.837 43 H 0.111 0.889 44 H 0.275 0.725 45 H 0.243 0.757 46 H 0.118 0.882 47 H 0.136 0.864 48 H 0.184 0.816 49 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -8.308 2.176 4.627 9.755 hybrid contribution -0.756 1.978 -0.666 2.219 sum -9.063 4.154 3.961 10.728 Atomic orbital electron populations 1.23359 0.76363 1.05647 1.02359 1.86088 1.23407 1.26266 1.88905 1.18976 0.91926 0.85366 0.99106 1.20185 0.92445 0.96770 1.04209 1.19458 0.96006 0.91001 1.05475 1.25523 0.92863 1.12525 0.88004 1.86660 1.74208 1.42246 1.31919 0.92234 0.76236 0.78934 0.81233 1.18807 0.91756 0.84210 1.00870 1.86086 1.35508 1.11941 1.89477 1.22697 0.92594 0.81909 1.06728 1.20538 0.88339 0.85474 0.75561 1.90774 1.16722 1.87319 1.49900 1.45343 1.11019 1.03808 1.74505 1.21921 0.95644 0.84322 0.97713 0.89949 1.23450 0.98925 0.98892 0.96653 1.22830 0.98632 0.94066 0.97233 0.88783 1.22271 1.01139 0.98016 0.77689 1.50779 1.25963 1.31333 1.08773 1.26913 0.89231 0.94258 0.93541 1.70544 1.29280 1.22734 1.08797 1.26411 0.90693 0.93624 1.01276 1.78028 1.25029 1.21807 0.92463 1.23264 1.01084 0.95601 0.95033 1.21361 0.92028 1.00029 1.04390 1.21421 1.01611 0.90903 1.04048 0.86700 0.91360 0.91598 0.82999 0.92219 0.77999 1.19039 1.22147 0.86405 0.85330 0.74304 0.89375 0.93445 0.83691 0.88852 0.72471 0.75650 0.88156 0.86384 0.81629 0.82084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.74 10.50 -93.34 -0.98 -1.72 16 3 C 0.09 0.26 6.69 22.49 0.15 0.41 16 4 C -0.12 -0.55 8.59 22.35 0.19 -0.36 16 5 C -0.12 -0.76 5.28 -19.78 -0.10 -0.87 16 6 C -0.08 -0.71 2.33 71.24 0.17 -0.55 16 7 O -0.54 -5.57 12.65 -148.98 -1.89 -7.46 16 8 Si 0.81 4.70 30.17 68.60 2.07 6.77 16 9 C 0.09 0.34 6.61 22.49 0.15 0.49 16 10 O -0.32 -1.60 8.54 -74.35 -0.64 -2.24 16 11 C 0.04 -0.14 5.22 71.24 0.37 0.23 16 12 C 0.51 1.08 7.91 87.66 0.69 1.77 16 13 O -0.57 -7.89 16.12 16.01 0.26 -7.63 16 14 N -0.69 3.56 5.26 -440.03 -2.32 1.25 16 15 C 0.11 -0.42 4.29 45.52 0.20 -0.22 16 16 H 0.08 0.14 7.50 -2.38 -0.02 0.13 16 17 C -0.14 0.33 7.45 31.21 0.23 0.56 16 18 C -0.11 0.99 3.74 -10.18 -0.04 0.95 16 19 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 20 C 0.13 -1.30 6.39 86.38 0.55 -0.75 16 21 N -0.38 0.86 3.69 -352.07 -1.30 -0.44 16 22 C 0.26 -0.76 12.63 180.36 2.28 1.51 16 23 N -0.59 -2.69 11.19 -204.00 -2.28 -4.98 16 24 C 0.18 0.82 13.03 180.76 2.36 3.18 16 25 N -0.34 -1.67 12.57 -61.24 -0.77 -2.44 16 26 C -0.11 1.33 7.38 31.12 0.23 1.56 16 27 C -0.16 0.32 9.03 22.35 0.20 0.53 16 28 C -0.16 0.27 9.03 22.35 0.20 0.47 16 29 H 0.11 -0.96 8.14 -2.38 -0.02 -0.98 16 30 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 31 H 0.07 -0.52 7.66 -2.39 -0.02 -0.53 16 32 H 0.15 0.28 5.13 -2.91 -0.01 0.27 16 33 H 0.06 0.69 7.83 -2.39 -0.02 0.67 16 34 H 0.37 2.87 8.56 -74.06 -0.63 2.23 16 35 H -0.26 -2.06 7.11 99.48 0.71 -1.36 16 36 H -0.29 -3.55 7.11 99.48 0.71 -2.84 16 37 H 0.12 -1.05 7.65 -2.39 -0.02 -1.07 16 38 H 0.13 -1.39 7.67 -2.39 -0.02 -1.41 16 39 H 0.42 -5.19 8.70 -92.71 -0.81 -6.00 16 40 H 0.09 -0.12 7.90 -2.39 -0.02 -0.13 16 41 H 0.05 0.17 8.14 -2.39 -0.02 0.15 16 42 H 0.15 -2.59 8.09 -2.38 -0.02 -2.61 16 43 H 0.09 -0.89 7.85 -2.39 -0.02 -0.91 16 44 H 0.26 -3.48 8.06 -2.91 -0.02 -3.50 16 45 H 0.23 -0.12 8.06 -2.91 -0.02 -0.14 16 46 H 0.10 -1.49 8.14 -2.39 -0.02 -1.51 16 47 H 0.12 -1.67 8.10 -2.39 -0.02 -1.69 16 48 H 0.17 -1.59 6.29 -2.91 -0.02 -1.61 16 49 H 0.16 -1.21 6.29 -2.91 -0.02 -1.23 16 Total: 0.00 -35.14 411.89 0.71 -34.44 By element: Atomic # 1 Polarization: -25.09 SS G_CDS: -0.39 Total: -25.48 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: 8.94 Total: 9.92 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -6.67 Total: -6.60 kcal Atomic # 8 Polarization: -15.80 SS G_CDS: -3.24 Total: -19.05 kcal Atomic # 14 Polarization: 4.70 SS G_CDS: 2.07 Total: 6.77 kcal Total: -35.14 0.71 -34.44 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.127 kcal (2) G-P(sol) polarization free energy of solvation -35.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.708 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.435 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds