Wall clock time and date at job start Sun Mar 7 2021 04:43:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 117.00018 * 2 1 4 4 C 1.38607 * 120.02933 * 179.97438 * 3 2 1 5 5 C 1.38661 * 119.89089 * 179.69496 * 4 3 2 6 6 O 1.35898 * 120.02763 * 180.30076 * 5 4 3 7 7 C 1.42902 * 116.99980 * 359.97438 * 6 5 4 8 8 C 1.50702 * 109.47127 * 179.97438 * 7 6 5 9 9 O 1.21284 * 119.99867 * 0.02562 * 8 7 6 10 10 N 1.34775 * 120.00117 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00078 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84832 * 23.80601 * 11 10 8 13 13 C 1.53782 * 113.61558 * 154.99541 * 11 10 8 14 14 C 1.53780 * 87.07751 * 89.11518 * 13 11 10 15 15 H 1.09001 * 113.61827 * 270.88305 * 14 13 11 16 16 C 1.53003 * 113.61187 * 139.97998 * 14 13 11 17 17 N 1.46499 * 109.46957 * 175.00073 * 16 14 13 18 18 C 1.34434 * 126.82160 * 124.71673 * 17 16 14 19 19 N 1.30831 * 108.07814 * 179.89328 * 18 17 16 20 20 C 1.33243 * 109.82757 * 0.37439 * 19 18 17 21 21 N 1.30711 * 108.94742 * 359.76680 * 20 19 18 22 22 C 1.53776 * 113.61571 * 252.49667 * 11 10 8 23 23 C 1.38749 * 119.94317 * 0.28018 * 5 4 3 24 24 C 1.50703 * 119.97312 * 179.97438 * 23 5 4 25 25 O 1.42904 * 109.47109 * 285.00040 * 24 23 5 26 26 Si 1.86296 * 109.47215 * 164.99829 * 24 23 5 27 27 C 1.38202 * 120.05677 * 0.02562 * 23 5 4 28 28 C 1.38157 * 120.10718 * 359.97284 * 27 23 5 29 29 H 1.08993 * 109.47167 * 60.00238 * 1 2 3 30 30 H 1.09005 * 109.46688 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47324 * 300.00034 * 1 2 3 32 32 H 1.08002 * 120.05734 * 359.97438 * 4 3 2 33 33 H 1.08998 * 109.47355 * 300.00087 * 7 6 5 34 34 H 1.09003 * 109.46834 * 60.00472 * 7 6 5 35 35 H 0.96997 * 119.99472 * 359.97438 * 10 8 7 36 36 H 1.08997 * 113.61805 * 203.66483 * 13 11 10 37 37 H 1.09001 * 113.61018 * 334.57369 * 13 11 10 38 38 H 1.08998 * 109.47364 * 295.00129 * 16 14 13 39 39 H 1.09005 * 109.46777 * 55.00394 * 16 14 13 40 40 H 1.07999 * 125.96172 * 0.02695 * 18 17 16 41 41 H 1.08003 * 125.52634 * 179.72425 * 20 19 18 42 42 H 1.09002 * 113.61674 * 25.43075 * 22 11 10 43 43 H 1.09002 * 113.61489 * 156.33743 * 22 11 10 44 44 H 1.08997 * 109.46742 * 44.99771 * 24 23 5 45 45 H 0.96701 * 114.00028 * 299.99829 * 25 24 23 46 46 H 1.48505 * 109.99766 * 180.02562 * 26 24 23 47 47 H 1.48499 * 110.00438 * 301.32114 * 26 24 23 48 48 H 1.08001 * 119.94342 * 180.02562 * 27 23 5 49 49 H 1.07998 * 119.96795 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0567 2.5211 -0.0059 6 8 5.4135 2.5961 -0.0115 7 6 6.1316 1.3606 -0.0099 8 6 7.6125 1.6402 -0.0175 9 8 8.0134 2.7849 -0.0231 10 7 8.4912 0.6184 -0.0179 11 6 9.9307 0.8902 -0.0247 12 1 10.1777 1.8730 0.3767 13 6 10.7755 -0.2484 0.5709 14 6 10.8274 -0.8450 -0.8455 15 1 10.0015 -1.5216 -1.0649 16 6 12.1917 -1.4314 -1.2138 17 7 12.1074 -2.0774 -2.5260 18 6 12.8756 -1.8239 -3.5997 19 7 12.4876 -2.6096 -4.5712 20 6 11.4734 -3.3696 -4.1600 21 7 11.2041 -3.0803 -2.9141 22 6 10.6092 0.5840 -1.3703 23 6 3.2970 3.6822 -0.0069 24 6 3.9773 5.0269 -0.0133 25 8 4.5078 5.2986 1.2855 26 14 2.7422 6.3455 -0.4679 27 6 1.9171 3.6065 -0.0010 28 6 1.2905 2.3752 0.0053 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 4.0197 0.3792 0.0014 33 1 5.8735 0.7915 0.8831 34 1 5.8664 0.7851 -0.8969 35 1 8.1705 -0.2970 -0.0130 36 1 11.7467 0.0772 0.9435 37 1 10.2325 -0.8670 1.2855 38 1 12.9330 -0.6330 -1.2489 39 1 12.4852 -2.1670 -0.4649 40 1 13.6752 -1.0997 -3.6507 41 1 10.9570 -4.1050 -4.7592 42 1 9.9321 0.6373 -2.2229 43 1 11.5350 1.1372 -1.5284 44 1 4.7873 5.0208 -0.7426 45 1 3.8415 5.3191 1.9861 46 1 3.4009 7.6764 -0.4783 47 1 2.1596 6.0572 -1.8031 48 1 1.3276 4.5115 -0.0023 49 1 0.2120 2.3187 0.0095 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:00 Heat of formation + Delta-G solvation = 21.426684 kcal Electronic energy + Delta-G solvation = -33356.557743 eV Core-core repulsion = 28675.898667 eV Total energy + Delta-G solvation = -4680.659076 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -43.01384 -41.87229 -41.34634 -40.23078 -39.37806 -38.15464 -36.84573 -35.51116 -34.02142 -32.28493 -32.14688 -31.46124 -29.92700 -28.77456 -28.47314 -26.99328 -26.06745 -24.83102 -23.71716 -22.98018 -22.50166 -22.46242 -21.93506 -20.42125 -19.94400 -18.72811 -18.33995 -17.96615 -17.84460 -17.55536 -17.22880 -17.12673 -16.80090 -16.75783 -16.46177 -16.07194 -16.00329 -15.82110 -15.57691 -15.25981 -15.15377 -15.10057 -14.96182 -14.55536 -14.38082 -14.07193 -13.80021 -13.75112 -13.56448 -13.42042 -13.36425 -13.20385 -12.93788 -12.57708 -12.35542 -12.17157 -12.04763 -11.90310 -11.75354 -11.66968 -11.64222 -10.94450 -10.93533 -10.74409 -10.59703 -10.23383 -10.23113 -9.71137 -9.09122 -4.97683 0.19668 0.31334 0.66286 1.28551 1.35295 1.40144 1.43830 1.72076 2.04190 2.07950 2.13446 2.48673 2.57491 3.13308 3.21918 3.25671 3.39176 3.42469 3.55531 3.62448 3.68864 3.74365 3.77321 3.86503 3.89233 3.91943 3.99719 4.00688 4.02333 4.13299 4.21319 4.23398 4.34324 4.35914 4.38432 4.43645 4.44786 4.50963 4.62418 4.71943 4.76252 4.79549 4.93242 5.01482 5.20948 5.25764 5.26622 5.36126 5.43957 5.46888 5.80269 6.08166 6.25088 6.34066 6.79829 7.04594 7.12910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.248 4.248 5 C 0.191 3.809 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.519 3.481 9 O -0.505 6.505 10 N -0.712 5.712 11 C 0.125 3.875 12 H 0.110 0.890 13 C -0.135 4.135 14 C -0.125 4.125 15 H 0.105 0.895 16 C 0.138 3.862 17 N -0.377 5.377 18 C 0.254 3.746 19 N -0.547 5.547 20 C 0.199 3.801 21 N -0.319 5.319 22 C -0.148 4.148 23 C -0.185 4.185 24 C -0.051 4.051 25 O -0.533 6.533 26 Si 0.680 3.320 27 C -0.034 4.034 28 C -0.239 4.239 29 H 0.059 0.941 30 H 0.103 0.897 31 H 0.060 0.940 32 H 0.138 0.862 33 H 0.098 0.902 34 H 0.095 0.905 35 H 0.403 0.597 36 H 0.103 0.897 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.093 0.907 40 H 0.218 0.782 41 H 0.217 0.783 42 H 0.072 0.928 43 H 0.095 0.905 44 H 0.113 0.887 45 H 0.373 0.627 46 H -0.254 1.254 47 H -0.257 1.257 48 H 0.139 0.861 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.960 -2.968 3.762 5.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.145 3.855 6 O -0.184 6.184 7 C -0.042 4.042 8 C 0.304 3.696 9 O -0.378 6.378 10 N -0.366 5.366 11 C 0.019 3.981 12 H 0.128 0.872 13 C -0.174 4.174 14 C -0.144 4.144 15 H 0.123 0.877 16 C 0.016 3.984 17 N -0.168 5.168 18 C -0.043 4.043 19 N -0.274 5.274 20 C -0.104 4.104 21 N -0.147 5.147 22 C -0.187 4.187 23 C -0.187 4.187 24 C -0.162 4.162 25 O -0.337 6.337 26 Si 0.582 3.418 27 C -0.051 4.051 28 C -0.258 4.258 29 H 0.078 0.922 30 H 0.121 0.879 31 H 0.078 0.922 32 H 0.156 0.844 33 H 0.115 0.885 34 H 0.113 0.887 35 H 0.238 0.762 36 H 0.121 0.879 37 H 0.100 0.900 38 H 0.123 0.877 39 H 0.111 0.889 40 H 0.234 0.766 41 H 0.233 0.767 42 H 0.091 0.909 43 H 0.113 0.887 44 H 0.130 0.870 45 H 0.219 0.781 46 H -0.179 1.179 47 H -0.182 1.182 48 H 0.157 0.843 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -2.533 -1.790 3.016 4.326 hybrid contribution 0.139 -1.082 -0.229 1.114 sum -2.394 -2.871 2.787 4.663 Atomic orbital electron populations 1.23153 0.77563 1.04448 1.01795 1.86080 1.22053 1.26644 1.87989 1.18680 0.91430 0.84423 0.92659 1.20395 0.92990 0.97315 1.15992 1.18401 0.81936 0.92470 0.92717 1.86260 1.14800 1.29530 1.87767 1.22501 0.90171 0.87175 1.04306 1.20007 0.87337 0.85579 0.76670 1.90807 1.79668 1.20776 1.46527 1.45461 1.05605 1.09203 1.76302 1.21769 0.79107 1.00335 0.96869 0.87249 1.23351 1.01264 0.96988 0.95808 1.22995 0.97403 0.96875 0.97104 0.87651 1.21924 0.98733 0.97132 0.80616 1.50566 1.25340 1.28789 1.12123 1.26116 0.96853 0.98612 0.82737 1.70569 1.15607 1.10642 1.30579 1.26049 0.94305 0.99153 0.90919 1.78004 1.14236 1.06802 1.15692 1.23553 1.01707 0.95315 0.98076 1.19604 0.92844 0.94503 1.11702 1.24853 1.04478 0.97557 0.89334 1.86598 1.37545 1.93491 1.16083 0.95340 0.83065 0.78073 0.85369 1.20596 0.92303 0.97359 0.94892 1.21137 1.00527 0.91741 1.12388 0.92241 0.87880 0.92155 0.84441 0.88453 0.88680 0.76220 0.87900 0.89987 0.87718 0.88922 0.76586 0.76708 0.90879 0.88651 0.86951 0.78102 1.17876 1.18205 0.84346 0.84614 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.29 10.49 -19.42 -0.20 -0.50 16 3 C 0.17 0.22 6.68 -39.24 -0.26 -0.05 16 4 C -0.25 -0.34 8.97 -39.29 -0.35 -0.69 16 5 C 0.19 0.50 6.66 -39.24 -0.26 0.24 16 6 O -0.27 -1.01 8.99 -39.33 -0.35 -1.37 16 7 C 0.04 0.00 5.22 36.01 0.19 0.19 16 8 C 0.52 0.95 7.91 -10.99 -0.09 0.86 16 9 O -0.50 -3.45 16.10 -14.36 -0.23 -3.68 16 10 N -0.71 1.09 5.26 -53.02 -0.28 0.81 16 11 C 0.12 -0.21 4.32 -67.12 -0.29 -0.50 16 12 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 13 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 14 C -0.12 0.41 3.75 -89.81 -0.34 0.07 16 15 H 0.11 -0.19 8.00 -51.93 -0.42 -0.60 16 16 C 0.14 -0.49 6.39 -4.04 -0.03 -0.52 16 17 N -0.38 0.07 3.69 -62.63 -0.23 -0.16 16 18 C 0.25 -0.03 12.63 -90.65 -1.14 -1.17 16 19 N -0.55 -1.54 11.19 -15.83 -0.18 -1.72 16 20 C 0.20 0.40 13.03 -91.81 -1.20 -0.79 16 21 N -0.32 -0.72 12.45 29.29 0.36 -0.36 16 22 C -0.15 0.32 7.43 -25.92 -0.19 0.13 16 23 C -0.19 -0.35 5.27 -104.44 -0.55 -0.90 16 24 C -0.05 -0.12 2.37 36.01 0.09 -0.03 16 25 O -0.53 -1.60 12.88 -35.23 -0.45 -2.05 16 26 Si 0.68 0.19 29.91 -169.99 -5.08 -4.90 16 27 C -0.03 0.01 8.65 -39.62 -0.34 -0.34 16 28 C -0.24 0.03 9.04 -39.40 -0.36 -0.32 16 29 H 0.06 -0.19 7.67 -51.93 -0.40 -0.59 16 30 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 31 H 0.06 -0.21 7.65 -51.93 -0.40 -0.61 16 32 H 0.14 -0.07 6.30 -52.49 -0.33 -0.40 16 33 H 0.10 -0.24 7.66 -51.93 -0.40 -0.64 16 34 H 0.10 -0.21 7.66 -51.93 -0.40 -0.61 16 35 H 0.40 -1.68 8.70 -40.82 -0.36 -2.04 16 36 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 37 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 38 H 0.10 -0.64 7.79 -51.93 -0.40 -1.04 16 39 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 40 H 0.22 -0.95 8.06 -52.49 -0.42 -1.37 16 41 H 0.22 -0.21 8.06 -52.48 -0.42 -0.64 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.10 -0.31 7.90 -51.93 -0.41 -0.72 16 44 H 0.11 0.49 7.82 -51.93 -0.41 0.08 16 45 H 0.37 -0.58 8.70 45.56 0.40 -0.18 16 46 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 47 H -0.26 -0.64 7.11 56.52 0.40 -0.23 16 48 H 0.14 -0.41 5.12 -52.49 -0.27 -0.67 16 49 H 0.14 -0.33 6.29 -52.49 -0.33 -0.66 16 LS Contribution 412.22 15.07 6.21 6.21 Total: 0.00 -14.42 412.22 -11.42 -25.84 By element: Atomic # 1 Polarization: -8.96 SS G_CDS: -6.66 Total: -15.61 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -4.33 Total: -2.52 kcal Atomic # 7 Polarization: -1.11 SS G_CDS: -0.32 Total: -1.43 kcal Atomic # 8 Polarization: -6.35 SS G_CDS: -1.24 Total: -7.60 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.08 Total: -4.90 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -14.42 -11.42 -25.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.271 kcal (2) G-P(sol) polarization free energy of solvation -14.423 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.848 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.845 kcal (6) G-S(sol) free energy of system = (1) + (5) 21.427 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds