Wall clock time and date at job start Sun Mar 7 2021 04:42:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35899 * 117.00018 * 2 1 4 4 C 1.38607 * 120.02933 * 179.97438 * 3 2 1 5 5 C 1.38661 * 119.89089 * 179.69496 * 4 3 2 6 6 O 1.35898 * 120.02763 * 180.30076 * 5 4 3 7 7 C 1.42902 * 116.99980 * 359.97438 * 6 5 4 8 8 C 1.50702 * 109.47127 * 179.97438 * 7 6 5 9 9 O 1.21284 * 119.99867 * 0.02562 * 8 7 6 10 10 N 1.34775 * 120.00117 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00078 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84832 * 23.80601 * 11 10 8 13 13 C 1.53782 * 113.61558 * 154.99541 * 11 10 8 14 14 C 1.53780 * 87.07751 * 89.11518 * 13 11 10 15 15 H 1.09001 * 113.61827 * 270.88305 * 14 13 11 16 16 C 1.53003 * 113.61187 * 139.97998 * 14 13 11 17 17 N 1.46499 * 109.46957 * 175.00073 * 16 14 13 18 18 C 1.34434 * 126.82160 * 124.71673 * 17 16 14 19 19 N 1.30831 * 108.07814 * 179.89328 * 18 17 16 20 20 C 1.33243 * 109.82757 * 0.37439 * 19 18 17 21 21 N 1.30711 * 108.94742 * 359.76680 * 20 19 18 22 22 C 1.53776 * 113.61571 * 252.49667 * 11 10 8 23 23 C 1.38749 * 119.94317 * 0.28018 * 5 4 3 24 24 C 1.50703 * 119.97312 * 179.97438 * 23 5 4 25 25 O 1.42904 * 109.47109 * 285.00040 * 24 23 5 26 26 Si 1.86296 * 109.47215 * 164.99829 * 24 23 5 27 27 C 1.38202 * 120.05677 * 0.02562 * 23 5 4 28 28 C 1.38157 * 120.10718 * 359.97284 * 27 23 5 29 29 H 1.08993 * 109.47167 * 60.00238 * 1 2 3 30 30 H 1.09005 * 109.46688 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47324 * 300.00034 * 1 2 3 32 32 H 1.08002 * 120.05734 * 359.97438 * 4 3 2 33 33 H 1.08998 * 109.47355 * 300.00087 * 7 6 5 34 34 H 1.09003 * 109.46834 * 60.00472 * 7 6 5 35 35 H 0.96997 * 119.99472 * 359.97438 * 10 8 7 36 36 H 1.08997 * 113.61805 * 203.66483 * 13 11 10 37 37 H 1.09001 * 113.61018 * 334.57369 * 13 11 10 38 38 H 1.08998 * 109.47364 * 295.00129 * 16 14 13 39 39 H 1.09005 * 109.46777 * 55.00394 * 16 14 13 40 40 H 1.07999 * 125.96172 * 0.02695 * 18 17 16 41 41 H 1.08003 * 125.52634 * 179.72425 * 20 19 18 42 42 H 1.09002 * 113.61674 * 25.43075 * 22 11 10 43 43 H 1.09002 * 113.61489 * 156.33743 * 22 11 10 44 44 H 1.08997 * 109.46742 * 44.99771 * 24 23 5 45 45 H 0.96701 * 114.00028 * 299.99829 * 25 24 23 46 46 H 1.48505 * 109.99766 * 180.02562 * 26 24 23 47 47 H 1.48499 * 110.00438 * 301.32114 * 26 24 23 48 48 H 1.08001 * 119.94342 * 180.02562 * 27 23 5 49 49 H 1.07998 * 119.96795 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0567 2.5211 -0.0059 6 8 5.4135 2.5961 -0.0115 7 6 6.1316 1.3606 -0.0099 8 6 7.6125 1.6402 -0.0175 9 8 8.0134 2.7849 -0.0231 10 7 8.4912 0.6184 -0.0179 11 6 9.9307 0.8902 -0.0247 12 1 10.1777 1.8730 0.3767 13 6 10.7755 -0.2484 0.5709 14 6 10.8274 -0.8450 -0.8455 15 1 10.0015 -1.5216 -1.0649 16 6 12.1917 -1.4314 -1.2138 17 7 12.1074 -2.0774 -2.5260 18 6 12.8756 -1.8239 -3.5997 19 7 12.4876 -2.6096 -4.5712 20 6 11.4734 -3.3696 -4.1600 21 7 11.2041 -3.0803 -2.9141 22 6 10.6092 0.5840 -1.3703 23 6 3.2970 3.6822 -0.0069 24 6 3.9773 5.0269 -0.0133 25 8 4.5078 5.2986 1.2855 26 14 2.7422 6.3455 -0.4679 27 6 1.9171 3.6065 -0.0010 28 6 1.2905 2.3752 0.0053 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 4.0197 0.3792 0.0014 33 1 5.8735 0.7915 0.8831 34 1 5.8664 0.7851 -0.8969 35 1 8.1705 -0.2970 -0.0130 36 1 11.7467 0.0772 0.9435 37 1 10.2325 -0.8670 1.2855 38 1 12.9330 -0.6330 -1.2489 39 1 12.4852 -2.1670 -0.4649 40 1 13.6752 -1.0997 -3.6507 41 1 10.9570 -4.1050 -4.7592 42 1 9.9321 0.6373 -2.2229 43 1 11.5350 1.1372 -1.5284 44 1 4.7873 5.0208 -0.7426 45 1 3.8415 5.3191 1.9861 46 1 3.4009 7.6764 -0.4783 47 1 2.1596 6.0572 -1.8031 48 1 1.3276 4.5115 -0.0023 49 1 0.2120 2.3187 0.0095 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:42:59 Heat of formation + Delta-G solvation = 17.698257 kcal Electronic energy + Delta-G solvation = -33356.719420 eV Core-core repulsion = 28675.898667 eV Total energy + Delta-G solvation = -4680.820753 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -43.00070 -41.91829 -41.32835 -40.20803 -39.42615 -38.27483 -36.93973 -35.49590 -34.04363 -32.31136 -32.17463 -31.47395 -29.91697 -28.68181 -28.33389 -26.78164 -26.13581 -24.75978 -23.72313 -22.94690 -22.52879 -22.42429 -21.97972 -20.31492 -19.94471 -18.73867 -18.31056 -18.03738 -17.87870 -17.61689 -17.21581 -17.06050 -16.75665 -16.68803 -16.52720 -16.01936 -15.97592 -15.88951 -15.62180 -15.26285 -15.15478 -15.05702 -14.95314 -14.58754 -14.47799 -13.91922 -13.88072 -13.59302 -13.46534 -13.35764 -13.31540 -13.18618 -12.81328 -12.52184 -12.28328 -12.18896 -12.03672 -11.88892 -11.79473 -11.65509 -11.46801 -11.14184 -10.98455 -10.80030 -10.53451 -10.37442 -10.23263 -9.73440 -9.12944 -5.05007 0.17974 0.27165 0.68467 1.30141 1.30348 1.35354 1.44134 1.63588 1.97353 1.99717 2.22292 2.49779 2.54976 3.34481 3.39929 3.44036 3.47232 3.52554 3.58308 3.70852 3.73430 3.79868 3.86904 3.91233 3.95637 4.05908 4.13373 4.14312 4.17516 4.31851 4.36969 4.42149 4.43783 4.47092 4.50475 4.58868 4.62824 4.71248 4.77035 4.78178 4.91474 4.98427 4.99661 5.09873 5.20742 5.25242 5.29779 5.43652 5.44720 5.48283 5.92930 6.07359 6.29923 6.36349 6.84983 6.99631 7.11942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.255 4.255 5 C 0.172 3.828 6 O -0.304 6.304 7 C 0.035 3.965 8 C 0.517 3.483 9 O -0.565 6.565 10 N -0.695 5.695 11 C 0.110 3.890 12 H 0.088 0.912 13 C -0.115 4.115 14 C -0.114 4.114 15 H 0.089 0.911 16 C 0.131 3.869 17 N -0.376 5.376 18 C 0.254 3.746 19 N -0.586 5.586 20 C 0.185 3.815 21 N -0.346 5.346 22 C -0.145 4.145 23 C -0.202 4.202 24 C -0.069 4.069 25 O -0.557 6.557 26 Si 0.796 3.204 27 C -0.031 4.031 28 C -0.236 4.236 29 H 0.068 0.932 30 H 0.115 0.885 31 H 0.072 0.928 32 H 0.150 0.850 33 H 0.123 0.877 34 H 0.116 0.884 35 H 0.418 0.582 36 H 0.124 0.876 37 H 0.089 0.911 38 H 0.137 0.863 39 H 0.102 0.898 40 H 0.255 0.745 41 H 0.231 0.769 42 H 0.047 0.953 43 H 0.109 0.891 44 H 0.079 0.921 45 H 0.391 0.609 46 H -0.303 1.303 47 H -0.281 1.281 48 H 0.168 0.832 49 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.775 -3.750 4.659 7.072 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.245 6.245 3 C 0.117 3.883 4 C -0.274 4.274 5 C 0.126 3.874 6 O -0.217 6.217 7 C -0.043 4.043 8 C 0.303 3.697 9 O -0.443 6.443 10 N -0.349 5.349 11 C 0.005 3.995 12 H 0.106 0.894 13 C -0.154 4.154 14 C -0.133 4.133 15 H 0.108 0.892 16 C 0.011 3.989 17 N -0.167 5.167 18 C -0.042 4.042 19 N -0.314 5.314 20 C -0.117 4.117 21 N -0.175 5.175 22 C -0.184 4.184 23 C -0.204 4.204 24 C -0.177 4.177 25 O -0.365 6.365 26 Si 0.701 3.299 27 C -0.048 4.048 28 C -0.255 4.255 29 H 0.087 0.913 30 H 0.133 0.867 31 H 0.091 0.909 32 H 0.167 0.833 33 H 0.140 0.860 34 H 0.134 0.866 35 H 0.255 0.745 36 H 0.142 0.858 37 H 0.108 0.892 38 H 0.155 0.845 39 H 0.120 0.880 40 H 0.271 0.729 41 H 0.247 0.753 42 H 0.065 0.935 43 H 0.128 0.872 44 H 0.097 0.903 45 H 0.240 0.760 46 H -0.232 1.232 47 H -0.207 1.207 48 H 0.185 0.815 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -3.351 -2.660 3.956 5.827 hybrid contribution 0.435 -0.866 -0.496 1.089 sum -2.916 -3.526 3.460 5.737 Atomic orbital electron populations 1.23417 0.75887 1.05710 1.02824 1.86058 1.23875 1.26609 1.87931 1.18877 0.91555 0.85136 0.92725 1.20538 0.93603 0.97287 1.15996 1.18639 0.81637 0.93356 0.93794 1.86217 1.15719 1.31503 1.88222 1.22707 0.88576 0.86568 1.06427 1.20430 0.88456 0.85192 0.75638 1.90774 1.80665 1.23117 1.49762 1.45390 1.05648 1.09317 1.74534 1.21919 0.79150 1.00542 0.97923 0.89398 1.23302 1.01606 0.95210 0.95257 1.22825 0.97340 0.95635 0.97509 0.89235 1.22264 0.99105 0.98115 0.79433 1.50752 1.24651 1.28146 1.13108 1.26840 0.97005 0.98266 0.82051 1.70545 1.16594 1.11985 1.32297 1.26445 0.94492 0.99599 0.91213 1.77918 1.15552 1.08068 1.15965 1.23562 1.01677 0.96556 0.96615 1.19759 0.93858 0.93983 1.12766 1.25149 1.04369 0.99650 0.88552 1.86540 1.39299 1.93619 1.17017 0.94112 0.80210 0.73031 0.82535 1.20878 0.91474 0.98655 0.93799 1.21460 1.01831 0.91111 1.11078 0.91324 0.86662 0.90936 0.83286 0.85962 0.86588 0.74496 0.85794 0.89227 0.84498 0.87978 0.72891 0.75259 0.93453 0.87230 0.90291 0.75980 1.23152 1.20739 0.81520 0.82010 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.39 10.49 -92.41 -0.97 -1.36 16 3 C 0.16 0.34 6.68 22.49 0.15 0.49 16 4 C -0.26 -0.85 8.97 22.46 0.20 -0.65 16 5 C 0.17 1.17 6.66 22.49 0.15 1.32 16 6 O -0.30 -3.05 8.99 -73.36 -0.66 -3.71 16 7 C 0.04 0.05 5.22 71.24 0.37 0.43 16 8 C 0.52 3.07 7.91 87.66 0.69 3.76 16 9 O -0.57 -9.75 16.10 16.00 0.26 -9.49 16 10 N -0.70 1.26 5.26 -440.05 -2.32 -1.06 16 11 C 0.11 -0.28 4.32 45.52 0.20 -0.08 16 12 H 0.09 0.21 7.46 -2.39 -0.02 0.19 16 13 C -0.12 1.09 7.39 31.12 0.23 1.32 16 14 C -0.11 0.81 3.75 -10.27 -0.04 0.77 16 15 H 0.09 -0.30 8.00 -2.39 -0.02 -0.32 16 16 C 0.13 -1.13 6.39 86.38 0.55 -0.58 16 17 N -0.38 0.32 3.69 -352.05 -1.30 -0.98 16 18 C 0.25 -0.21 12.63 180.36 2.28 2.07 16 19 N -0.59 -3.58 11.19 -204.00 -2.28 -5.87 16 20 C 0.19 0.93 13.03 180.77 2.36 3.29 16 21 N -0.35 -1.77 12.45 -61.24 -0.76 -2.53 16 22 C -0.15 0.55 7.43 31.12 0.23 0.78 16 23 C -0.20 -0.97 5.27 -19.75 -0.10 -1.08 16 24 C -0.07 -0.46 2.37 71.24 0.17 -0.29 16 25 O -0.56 -4.44 12.88 -148.98 -1.92 -6.36 16 26 Si 0.80 0.68 29.91 68.60 2.05 2.73 16 27 C -0.03 0.03 8.65 22.24 0.19 0.23 16 28 C -0.24 0.35 9.04 22.38 0.20 0.56 16 29 H 0.07 -0.56 7.67 -2.39 -0.02 -0.58 16 30 H 0.12 -1.05 8.14 -2.38 -0.02 -1.07 16 31 H 0.07 -0.64 7.65 -2.38 -0.02 -0.66 16 32 H 0.15 -0.08 6.30 -2.91 -0.02 -0.10 16 33 H 0.12 -0.52 7.66 -2.39 -0.02 -0.54 16 34 H 0.12 -0.40 7.66 -2.39 -0.02 -0.42 16 35 H 0.42 -3.29 8.70 -92.71 -0.81 -4.10 16 36 H 0.12 -1.62 8.10 -2.39 -0.02 -1.64 16 37 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 38 H 0.14 -2.05 7.79 -2.39 -0.02 -2.07 16 39 H 0.10 -1.00 8.14 -2.38 -0.02 -1.02 16 40 H 0.26 -2.69 8.06 -2.91 -0.02 -2.71 16 41 H 0.23 -0.16 8.06 -2.91 -0.02 -0.18 16 42 H 0.05 0.08 8.14 -2.39 -0.02 0.07 16 43 H 0.11 -0.74 7.90 -2.39 -0.02 -0.76 16 44 H 0.08 0.99 7.82 -2.39 -0.02 0.97 16 45 H 0.39 -0.84 8.70 -74.06 -0.64 -1.48 16 46 H -0.30 -2.69 7.11 99.48 0.71 -1.98 16 47 H -0.28 -1.31 7.11 99.48 0.71 -0.60 16 48 H 0.17 -1.30 5.12 -2.91 -0.01 -1.31 16 49 H 0.16 -1.19 6.29 -2.91 -0.02 -1.20 16 Total: 0.00 -38.36 412.22 0.64 -37.72 By element: Atomic # 1 Polarization: -22.05 SS G_CDS: -0.40 Total: -22.45 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 8.94 Total: 13.35 kcal Atomic # 7 Polarization: -3.77 SS G_CDS: -6.66 Total: -10.43 kcal Atomic # 8 Polarization: -17.64 SS G_CDS: -3.29 Total: -20.93 kcal Atomic # 14 Polarization: 0.68 SS G_CDS: 2.05 Total: 2.73 kcal Total: -38.36 0.64 -37.72 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.418 kcal (2) G-P(sol) polarization free energy of solvation -38.364 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.054 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.720 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds