Wall clock time and date at job start Sun Mar 7 2021 04:43:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37641 * 125.67443 * 2 1 4 4 C 1.46664 * 126.22916 * 359.97438 * 3 2 1 5 5 O 1.21698 * 119.99854 * 4.66335 * 4 3 2 6 6 N 1.34776 * 120.00458 * 184.65856 * 4 3 2 7 7 C 1.46501 * 120.00391 * 174.85369 * 6 4 3 8 8 H 1.09004 * 112.84886 * 336.20416 * 7 6 4 9 9 C 1.53777 * 113.61089 * 107.50849 * 7 6 4 10 10 C 1.53779 * 87.08366 * 89.11679 * 9 7 6 11 11 H 1.08992 * 113.68926 * 270.87290 * 10 9 7 12 12 C 1.52999 * 113.61345 * 139.98060 * 10 9 7 13 13 N 1.46499 * 109.47575 * 87.50353 * 12 10 9 14 14 C 1.34429 * 126.82346 * 124.70596 * 13 12 10 15 15 N 1.30838 * 108.07594 * 179.89955 * 14 13 12 16 16 C 1.33246 * 109.82774 * 0.37693 * 15 14 13 17 17 N 1.30710 * 108.94653 * 359.76878 * 16 15 14 18 18 C 1.53779 * 87.07999 * 25.43311 * 10 9 7 19 19 C 1.37891 * 107.54638 * 179.72483 * 3 2 1 20 20 C 1.39874 * 107.09048 * 0.24078 * 19 3 2 21 21 Br 1.89109 * 126.07134 * 179.97438 * 20 19 3 22 22 C 1.35503 * 107.85783 * 0.02562 * 20 19 3 23 23 C 1.50698 * 125.57364 * 179.97438 * 22 20 19 24 24 O 1.42897 * 109.46982 * 244.74430 * 23 22 20 25 25 Si 1.86302 * 109.46975 * 124.74732 * 23 22 20 26 26 H 1.09004 * 109.47257 * 84.50282 * 1 2 3 27 27 H 1.08998 * 109.47338 * 204.50599 * 1 2 3 28 28 H 1.09004 * 109.47365 * 324.51065 * 1 2 3 29 29 H 0.96998 * 119.99855 * 354.86643 * 6 4 3 30 30 H 1.09005 * 113.61681 * 334.56452 * 9 7 6 31 31 H 1.09005 * 113.61230 * 203.66850 * 9 7 6 32 32 H 1.09002 * 109.47484 * 327.50299 * 12 10 9 33 33 H 1.09001 * 109.47235 * 207.50409 * 12 10 9 34 34 H 1.07999 * 125.95989 * 0.04220 * 14 13 12 35 35 H 1.07992 * 125.52412 * 179.79953 * 16 15 14 36 36 H 1.08994 * 113.61901 * 89.11399 * 18 10 9 37 37 H 1.09000 * 113.61417 * 219.93466 * 18 10 9 38 38 H 1.07999 * 126.45279 * 180.24654 * 19 3 2 39 39 H 1.08998 * 109.47246 * 4.74567 * 23 22 20 40 40 H 0.96700 * 114.00281 * 300.00369 * 24 23 22 41 41 H 1.48503 * 109.99770 * 184.98854 * 25 23 22 42 42 H 1.48499 * 110.00095 * 306.30454 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6246 2.7643 0.0847 6 7 2.7085 3.5142 -0.0953 7 6 2.2485 4.9004 -0.2094 8 1 1.2390 4.9795 -0.6130 9 6 2.4709 5.7301 1.0661 10 6 3.8549 6.0866 0.4985 11 1 4.6373 5.3805 0.7763 12 6 4.2579 7.5434 0.7357 13 7 4.9176 7.6619 2.0383 14 6 6.1367 8.1740 2.2804 15 7 6.3592 8.1015 3.5677 16 6 5.3133 7.5439 4.1764 17 7 4.4047 7.2572 3.2816 18 6 3.2615 5.8310 -0.8969 19 6 3.5781 0.6891 0.0063 20 6 3.5528 -0.7094 0.0045 21 35 5.0609 -1.8504 0.0103 22 6 2.2558 -1.1015 -0.0033 23 6 1.7713 -2.5285 -0.0083 24 8 1.0806 -2.7928 -1.2310 25 14 0.6158 -2.7970 1.4282 26 1 -0.3634 0.0984 -1.0230 27 1 -0.3634 -0.9351 0.4262 28 1 -0.3634 0.8368 0.5966 29 1 3.6583 3.3174 -0.0880 30 1 2.5130 5.1304 1.9753 31 1 1.8009 6.5856 1.1527 32 1 3.3686 8.1736 0.7203 33 1 4.9433 7.8632 -0.0492 34 1 6.8133 8.5774 1.5415 35 1 5.2297 7.3593 5.2371 36 1 2.8077 6.7139 -1.3469 37 1 3.9425 5.3140 -1.5730 38 1 4.4582 1.3150 0.0117 39 1 2.6238 -3.2020 0.0804 40 1 0.3087 -2.2288 -1.3766 41 1 0.2256 -4.2278 1.5056 42 1 1.2727 -2.3806 2.6932 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:05 Heat of formation + Delta-G solvation = 116.196939 kcal Electronic energy + Delta-G solvation = -28241.884666 eV Core-core repulsion = 24081.219366 eV Total energy + Delta-G solvation = -4160.665300 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.058 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -43.01324 -42.93468 -41.23018 -39.39584 -37.90763 -35.64143 -34.69109 -33.93623 -32.14583 -32.10259 -30.97158 -29.28148 -27.51900 -27.09340 -26.93712 -24.69706 -23.33952 -22.90225 -22.47771 -21.88710 -20.71628 -20.43923 -19.11619 -18.37817 -18.07113 -17.48381 -17.13282 -16.91575 -16.76852 -16.25252 -16.05304 -15.93848 -15.67066 -15.31885 -15.23025 -14.80076 -14.69659 -14.48208 -14.34816 -14.29968 -14.21429 -13.85847 -13.67688 -13.35228 -13.23969 -12.98501 -12.93866 -12.40979 -12.26621 -11.92919 -11.86445 -11.48671 -11.31016 -11.05818 -10.92808 -10.84439 -10.73444 -10.62624 -10.27351 -9.85229 -9.30335 -5.26728 0.10258 0.62266 0.67837 0.88226 1.16608 1.30158 1.34092 1.51702 1.81329 2.05478 2.10528 2.12907 3.06622 3.10443 3.21500 3.33741 3.38897 3.39897 3.41871 3.51792 3.58872 3.81557 3.86297 3.93059 3.96954 4.01847 4.12892 4.17559 4.35643 4.37762 4.41647 4.44423 4.51211 4.55109 4.66600 4.77186 4.92443 4.97212 5.19064 5.28801 5.39511 5.48751 5.50464 5.73753 5.81103 6.21766 6.25648 6.97497 7.14529 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.395 5.395 3 C -0.033 4.033 4 C 0.597 3.403 5 O -0.537 6.537 6 N -0.700 5.700 7 C 0.123 3.877 8 H 0.109 0.891 9 C -0.134 4.134 10 C -0.123 4.123 11 H 0.096 0.904 12 C 0.137 3.863 13 N -0.379 5.379 14 C 0.251 3.749 15 N -0.547 5.547 16 C 0.196 3.804 17 N -0.312 5.312 18 C -0.137 4.137 19 C -0.108 4.108 20 C -0.158 4.158 21 Br -0.020 7.020 22 C 0.052 3.948 23 C -0.048 4.048 24 O -0.527 6.527 25 Si 0.664 3.336 26 H 0.095 0.905 27 H 0.086 0.914 28 H 0.118 0.882 29 H 0.404 0.596 30 H 0.077 0.923 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.104 0.896 34 H 0.218 0.782 35 H 0.216 0.784 36 H 0.103 0.897 37 H 0.081 0.919 38 H 0.155 0.845 39 H 0.136 0.864 40 H 0.373 0.627 41 H -0.236 1.236 42 H -0.244 1.244 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.642 3.094 -3.617 5.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.069 5.069 3 C -0.147 4.147 4 C 0.385 3.615 5 O -0.415 6.415 6 N -0.351 5.351 7 C 0.018 3.982 8 H 0.127 0.873 9 C -0.173 4.173 10 C -0.143 4.143 11 H 0.114 0.886 12 C 0.015 3.985 13 N -0.170 5.170 14 C -0.046 4.046 15 N -0.274 5.274 16 C -0.107 4.107 17 N -0.139 5.139 18 C -0.175 4.175 19 C -0.136 4.136 20 C -0.244 4.244 21 Br 0.065 6.935 22 C -0.068 4.068 23 C -0.159 4.159 24 O -0.331 6.331 25 Si 0.562 3.438 26 H 0.113 0.887 27 H 0.104 0.896 28 H 0.136 0.864 29 H 0.239 0.761 30 H 0.096 0.904 31 H 0.113 0.887 32 H 0.111 0.889 33 H 0.123 0.877 34 H 0.234 0.766 35 H 0.232 0.768 36 H 0.122 0.878 37 H 0.100 0.900 38 H 0.172 0.828 39 H 0.153 0.847 40 H 0.220 0.780 41 H -0.159 1.159 42 H -0.168 1.168 Dipole moment (debyes) X Y Z Total from point charges -2.456 1.807 -2.613 4.016 hybrid contribution 1.109 0.300 -0.396 1.215 sum -1.348 2.107 -3.009 3.913 Atomic orbital electron populations 1.22555 0.75202 1.04662 1.05546 1.43689 1.06959 1.03966 1.52253 1.19918 0.89621 0.87637 1.17489 1.16770 0.85635 0.83069 0.76037 1.90827 1.16028 1.84617 1.50065 1.45265 1.09697 1.05458 1.74702 1.21851 0.99478 0.79509 0.97409 0.87313 1.23418 0.95423 1.00270 0.98151 1.22920 0.98553 0.95391 0.97400 0.88619 1.21918 0.99019 0.98033 0.79499 1.50597 1.13760 1.45268 1.07376 1.26129 0.87413 0.95999 0.95009 1.70570 1.28705 1.23510 1.04596 1.26069 0.87361 0.96278 1.00961 1.78089 1.23098 1.23538 0.89222 1.23365 0.98320 1.00147 0.95689 1.21219 0.95203 0.93054 1.04086 1.20796 0.91297 0.94369 1.17935 1.96687 1.35682 1.62995 1.98175 1.20743 0.89773 0.89872 1.06443 1.24859 1.03023 0.90478 0.97537 1.86629 1.45286 1.62329 1.38890 0.95375 0.86563 0.85217 0.76687 0.88707 0.89600 0.86388 0.76089 0.90421 0.88716 0.88898 0.87739 0.76593 0.76776 0.87845 0.90036 0.82750 0.84661 0.77951 1.15946 1.16770 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.18 8.94 59.85 0.54 0.36 16 2 N -0.39 -0.01 3.10 -115.59 -0.36 -0.36 16 3 C -0.03 -0.02 6.88 -81.98 -0.56 -0.59 16 4 C 0.60 0.50 7.77 -12.86 -0.10 0.40 16 5 O -0.54 -1.74 14.41 5.19 0.07 -1.66 16 6 N -0.70 1.22 5.25 -54.33 -0.29 0.94 16 7 C 0.12 -0.29 4.29 -67.12 -0.29 -0.58 16 8 H 0.11 -0.12 7.53 -51.93 -0.39 -0.51 16 9 C -0.13 0.26 7.43 -25.92 -0.19 0.07 16 10 C -0.12 0.47 3.73 -89.81 -0.33 0.13 16 11 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 12 C 0.14 -0.55 6.39 -4.04 -0.03 -0.58 16 13 N -0.38 0.21 3.69 -62.63 -0.23 -0.03 16 14 C 0.25 -0.14 12.63 -90.65 -1.14 -1.28 16 15 N -0.55 -1.40 11.19 -15.83 -0.18 -1.57 16 16 C 0.20 0.38 13.03 -91.81 -1.20 -0.81 16 17 N -0.31 -0.67 12.57 29.29 0.37 -0.30 16 18 C -0.14 0.67 7.39 -25.92 -0.19 0.48 16 19 C -0.11 -0.04 10.34 -39.10 -0.40 -0.45 16 20 C -0.16 -0.28 6.53 -39.95 -0.26 -0.54 16 21 Br -0.02 -0.04 33.06 -68.01 -2.25 -2.29 16 22 C 0.05 0.05 5.30 -81.90 -0.43 -0.38 16 23 C -0.05 -0.01 2.87 36.00 0.10 0.09 16 24 O -0.53 -0.01 12.88 -35.23 -0.45 -0.47 16 25 Si 0.66 -0.59 29.23 -169.99 -4.97 -5.56 16 26 H 0.09 -0.42 8.14 -51.93 -0.42 -0.84 16 27 H 0.09 -0.46 3.77 -51.93 -0.20 -0.66 16 28 H 0.12 -0.22 6.54 -51.93 -0.34 -0.56 16 29 H 0.40 -1.43 7.60 -40.82 -0.31 -1.74 16 30 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.09 -0.19 7.90 -51.93 -0.41 -0.60 16 32 H 0.09 -0.39 7.84 -51.93 -0.41 -0.80 16 33 H 0.10 -0.71 8.09 -51.93 -0.42 -1.13 16 34 H 0.22 -1.06 8.06 -52.49 -0.42 -1.49 16 35 H 0.22 -0.19 8.06 -52.49 -0.42 -0.61 16 36 H 0.10 -0.62 8.10 -51.93 -0.42 -1.04 16 37 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 38 H 0.15 -0.31 7.45 -52.49 -0.39 -0.70 16 39 H 0.14 0.14 6.96 -51.93 -0.36 -0.22 16 40 H 0.37 -1.46 7.48 45.56 0.34 -1.12 16 41 H -0.24 -0.35 7.11 56.52 0.40 0.05 16 42 H -0.24 -0.52 7.11 56.52 0.40 -0.12 16 LS Contribution 371.04 15.07 5.59 5.59 Total: 0.00 -11.18 371.04 -12.23 -23.41 By element: Atomic # 1 Polarization: -8.98 SS G_CDS: -5.04 Total: -14.02 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -4.50 Total: -3.68 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -0.68 Total: -1.32 kcal Atomic # 8 Polarization: -1.75 SS G_CDS: -0.38 Total: -2.13 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -4.97 Total: -5.56 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.25 Total: -2.29 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -11.18 -12.23 -23.41 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.604 kcal (2) G-P(sol) polarization free energy of solvation -11.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 128.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.407 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds