Wall clock time and date at job start Sun Mar 7 2021 04:43:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37641 * 125.67443 * 2 1 4 4 C 1.46664 * 126.22916 * 359.97438 * 3 2 1 5 5 O 1.21698 * 119.99854 * 4.66335 * 4 3 2 6 6 N 1.34776 * 120.00458 * 184.65856 * 4 3 2 7 7 C 1.46501 * 120.00391 * 174.85369 * 6 4 3 8 8 H 1.09004 * 112.84886 * 336.20416 * 7 6 4 9 9 C 1.53777 * 113.61089 * 107.50849 * 7 6 4 10 10 C 1.53779 * 87.08366 * 89.11679 * 9 7 6 11 11 H 1.08992 * 113.68926 * 270.87290 * 10 9 7 12 12 C 1.52999 * 113.61345 * 139.98060 * 10 9 7 13 13 N 1.46499 * 109.47575 * 87.50353 * 12 10 9 14 14 C 1.34429 * 126.82346 * 124.70596 * 13 12 10 15 15 N 1.30838 * 108.07594 * 179.89955 * 14 13 12 16 16 C 1.33246 * 109.82774 * 0.37693 * 15 14 13 17 17 N 1.30710 * 108.94653 * 359.76878 * 16 15 14 18 18 C 1.53779 * 87.07999 * 25.43311 * 10 9 7 19 19 C 1.37891 * 107.54638 * 179.72483 * 3 2 1 20 20 C 1.39874 * 107.09048 * 0.24078 * 19 3 2 21 21 Br 1.89109 * 126.07134 * 179.97438 * 20 19 3 22 22 C 1.35503 * 107.85783 * 0.02562 * 20 19 3 23 23 C 1.50698 * 125.57364 * 179.97438 * 22 20 19 24 24 O 1.42897 * 109.46982 * 244.74430 * 23 22 20 25 25 Si 1.86302 * 109.46975 * 124.74732 * 23 22 20 26 26 H 1.09004 * 109.47257 * 84.50282 * 1 2 3 27 27 H 1.08998 * 109.47338 * 204.50599 * 1 2 3 28 28 H 1.09004 * 109.47365 * 324.51065 * 1 2 3 29 29 H 0.96998 * 119.99855 * 354.86643 * 6 4 3 30 30 H 1.09005 * 113.61681 * 334.56452 * 9 7 6 31 31 H 1.09005 * 113.61230 * 203.66850 * 9 7 6 32 32 H 1.09002 * 109.47484 * 327.50299 * 12 10 9 33 33 H 1.09001 * 109.47235 * 207.50409 * 12 10 9 34 34 H 1.07999 * 125.95989 * 0.04220 * 14 13 12 35 35 H 1.07992 * 125.52412 * 179.79953 * 16 15 14 36 36 H 1.08994 * 113.61901 * 89.11399 * 18 10 9 37 37 H 1.09000 * 113.61417 * 219.93466 * 18 10 9 38 38 H 1.07999 * 126.45279 * 180.24654 * 19 3 2 39 39 H 1.08998 * 109.47246 * 4.74567 * 23 22 20 40 40 H 0.96700 * 114.00281 * 300.00369 * 24 23 22 41 41 H 1.48503 * 109.99770 * 184.98854 * 25 23 22 42 42 H 1.48499 * 110.00095 * 306.30454 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 -0.0005 5 8 0.6246 2.7643 0.0847 6 7 2.7085 3.5142 -0.0953 7 6 2.2485 4.9004 -0.2094 8 1 1.2390 4.9795 -0.6130 9 6 2.4709 5.7301 1.0661 10 6 3.8549 6.0866 0.4985 11 1 4.6373 5.3805 0.7763 12 6 4.2579 7.5434 0.7357 13 7 4.9176 7.6619 2.0383 14 6 6.1367 8.1740 2.2804 15 7 6.3592 8.1015 3.5677 16 6 5.3133 7.5439 4.1764 17 7 4.4047 7.2572 3.2816 18 6 3.2615 5.8310 -0.8969 19 6 3.5781 0.6891 0.0063 20 6 3.5528 -0.7094 0.0045 21 35 5.0609 -1.8504 0.0103 22 6 2.2558 -1.1015 -0.0033 23 6 1.7713 -2.5285 -0.0083 24 8 1.0806 -2.7928 -1.2310 25 14 0.6158 -2.7970 1.4282 26 1 -0.3634 0.0984 -1.0230 27 1 -0.3634 -0.9351 0.4262 28 1 -0.3634 0.8368 0.5966 29 1 3.6583 3.3174 -0.0880 30 1 2.5130 5.1304 1.9753 31 1 1.8009 6.5856 1.1527 32 1 3.3686 8.1736 0.7203 33 1 4.9433 7.8632 -0.0492 34 1 6.8133 8.5774 1.5415 35 1 5.2297 7.3593 5.2371 36 1 2.8077 6.7139 -1.3469 37 1 3.9425 5.3140 -1.5730 38 1 4.4582 1.3150 0.0117 39 1 2.6238 -3.2020 0.0804 40 1 0.3087 -2.2288 -1.3766 41 1 0.2256 -4.2278 1.5056 42 1 1.2727 -2.3806 2.6932 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:43:04 Heat of formation + Delta-G solvation = 116.119365 kcal Electronic energy + Delta-G solvation = -28241.888030 eV Core-core repulsion = 24081.219366 eV Total energy + Delta-G solvation = -4160.668664 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.058 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.98165 -42.92357 -41.11525 -39.34969 -37.89753 -35.55789 -34.62828 -33.90737 -32.15346 -32.10583 -31.00217 -29.12902 -27.41737 -27.07568 -26.68740 -24.58102 -23.33039 -22.83779 -22.39843 -21.85806 -20.70366 -20.26405 -19.06845 -18.26791 -18.03035 -17.45292 -17.06643 -16.79883 -16.71884 -16.15618 -16.06607 -15.86760 -15.59502 -15.20676 -15.13587 -14.74605 -14.59186 -14.43976 -14.39428 -14.30015 -14.02537 -13.74149 -13.45376 -13.26133 -13.11690 -12.96787 -12.80461 -12.38973 -12.18146 -11.97800 -11.71288 -11.39345 -11.24377 -11.14557 -10.95006 -10.85099 -10.76782 -10.53388 -10.20507 -9.85755 -9.34633 -5.25232 0.08640 0.56644 0.73264 0.86684 1.13502 1.37412 1.49217 1.50728 1.79248 2.03250 2.10003 2.20253 3.15618 3.33527 3.39316 3.46726 3.48357 3.55794 3.67576 3.68461 3.80005 3.85799 3.99587 4.14380 4.21149 4.25546 4.28462 4.36350 4.46907 4.57292 4.60628 4.62490 4.72742 4.79593 4.86712 4.99909 5.07493 5.15278 5.19226 5.35124 5.47833 5.49460 5.56058 5.77812 5.98163 6.34157 6.44439 7.00010 7.16265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.394 5.394 3 C -0.043 4.043 4 C 0.595 3.405 5 O -0.567 6.567 6 N -0.689 5.689 7 C 0.115 3.885 8 H 0.095 0.905 9 C -0.137 4.137 10 C -0.113 4.113 11 H 0.087 0.913 12 C 0.130 3.870 13 N -0.377 5.377 14 C 0.255 3.745 15 N -0.586 5.586 16 C 0.182 3.818 17 N -0.342 5.342 18 C -0.114 4.114 19 C -0.107 4.107 20 C -0.182 4.182 21 Br -0.027 7.027 22 C 0.048 3.952 23 C -0.054 4.054 24 O -0.538 6.538 25 Si 0.751 3.249 26 H 0.113 0.887 27 H 0.109 0.891 28 H 0.108 0.892 29 H 0.413 0.587 30 H 0.046 0.954 31 H 0.094 0.906 32 H 0.097 0.903 33 H 0.143 0.857 34 H 0.258 0.742 35 H 0.227 0.773 36 H 0.123 0.877 37 H 0.094 0.906 38 H 0.174 0.826 39 H 0.125 0.875 40 H 0.391 0.609 41 H -0.267 1.267 42 H -0.287 1.287 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.411 4.059 -5.342 6.856 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.068 5.068 3 C -0.158 4.158 4 C 0.383 3.617 5 O -0.447 6.447 6 N -0.340 5.340 7 C 0.010 3.990 8 H 0.113 0.887 9 C -0.176 4.176 10 C -0.133 4.133 11 H 0.106 0.894 12 C 0.010 3.990 13 N -0.168 5.168 14 C -0.041 4.041 15 N -0.314 5.314 16 C -0.121 4.121 17 N -0.171 5.171 18 C -0.153 4.153 19 C -0.134 4.134 20 C -0.268 4.268 21 Br 0.057 6.943 22 C -0.073 4.073 23 C -0.163 4.163 24 O -0.345 6.345 25 Si 0.653 3.347 26 H 0.131 0.869 27 H 0.126 0.874 28 H 0.126 0.874 29 H 0.250 0.750 30 H 0.065 0.935 31 H 0.112 0.888 32 H 0.115 0.885 33 H 0.161 0.839 34 H 0.274 0.726 35 H 0.243 0.757 36 H 0.141 0.859 37 H 0.112 0.888 38 H 0.191 0.809 39 H 0.143 0.857 40 H 0.241 0.759 41 H -0.192 1.192 42 H -0.213 1.213 Dipole moment (debyes) X Y Z Total from point charges -2.228 2.800 -4.385 5.660 hybrid contribution 1.023 0.006 0.139 1.033 sum -1.205 2.806 -4.246 5.230 Atomic orbital electron populations 1.22791 0.73651 1.05368 1.06759 1.43904 1.07953 1.03499 1.51420 1.20027 0.89969 0.87808 1.17966 1.16873 0.85521 0.83500 0.75831 1.90808 1.17190 1.85011 1.51731 1.45237 1.09925 1.05383 1.73456 1.21955 0.99868 0.79418 0.97759 0.88685 1.23397 0.97182 1.00000 0.97008 1.22798 0.97017 0.95616 0.97832 0.89433 1.22277 1.00189 0.97728 0.78849 1.50788 1.13894 1.44622 1.07495 1.26892 0.87612 0.94691 0.94879 1.70543 1.29590 1.24967 1.06345 1.26405 0.87458 0.96434 1.01791 1.78012 1.24018 1.24535 0.90497 1.23300 0.97128 0.99889 0.94960 1.21468 0.95839 0.92790 1.03341 1.20993 0.91498 0.94959 1.19316 1.96659 1.36088 1.63328 1.98249 1.20866 0.89858 0.90337 1.06271 1.24954 1.03188 0.89898 0.98291 1.86592 1.46249 1.63010 1.38669 0.94411 0.84546 0.82363 0.73394 0.86880 0.87354 0.87374 0.74965 0.93463 0.88764 0.88454 0.83946 0.72598 0.75658 0.85914 0.88756 0.80884 0.85732 0.75948 1.19210 1.21338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.32 8.94 127.77 1.14 0.83 16 2 N -0.39 -0.12 3.10 -519.61 -1.61 -1.73 16 3 C -0.04 -0.08 6.88 40.35 0.28 0.20 16 4 C 0.59 1.44 7.77 86.44 0.67 2.11 16 5 O -0.57 -4.32 14.41 -4.34 -0.06 -4.39 16 6 N -0.69 2.21 5.25 -444.00 -2.33 -0.12 16 7 C 0.12 -0.54 4.29 45.52 0.20 -0.34 16 8 H 0.10 -0.14 7.53 -2.38 -0.02 -0.16 16 9 C -0.14 0.44 7.43 31.12 0.23 0.67 16 10 C -0.11 0.96 3.73 -10.27 -0.04 0.92 16 11 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 12 C 0.13 -1.27 6.39 86.38 0.55 -0.72 16 13 N -0.38 0.65 3.69 -352.06 -1.30 -0.65 16 14 C 0.26 -0.54 12.63 180.36 2.28 1.74 16 15 N -0.59 -3.19 11.19 -204.00 -2.28 -5.47 16 16 C 0.18 0.93 13.03 180.76 2.36 3.28 16 17 N -0.34 -1.77 12.57 -61.25 -0.77 -2.54 16 18 C -0.11 1.33 7.39 31.12 0.23 1.56 16 19 C -0.11 -0.12 10.34 22.58 0.23 0.11 16 20 C -0.18 -0.75 6.53 22.03 0.14 -0.61 16 21 Br -0.03 -0.12 33.06 -20.37 -0.67 -0.80 16 22 C 0.05 0.11 5.30 41.34 0.22 0.33 16 23 C -0.05 -0.04 2.87 71.24 0.20 0.16 16 24 O -0.54 0.19 12.88 -148.98 -1.92 -1.73 16 25 Si 0.75 -1.04 29.23 68.60 2.00 0.96 16 26 H 0.11 -1.08 8.14 -2.38 -0.02 -1.10 16 27 H 0.11 -1.23 3.77 -2.39 -0.01 -1.24 16 28 H 0.11 -0.34 6.54 -2.38 -0.02 -0.36 16 29 H 0.41 -3.02 7.60 -92.71 -0.70 -3.72 16 30 H 0.05 0.15 8.14 -2.38 -0.02 0.13 16 31 H 0.09 -0.31 7.90 -2.38 -0.02 -0.33 16 32 H 0.10 -0.99 7.84 -2.39 -0.02 -1.00 16 33 H 0.14 -2.45 8.09 -2.39 -0.02 -2.47 16 34 H 0.26 -3.19 8.06 -2.91 -0.02 -3.22 16 35 H 0.23 0.01 8.06 -2.91 -0.02 -0.02 16 36 H 0.12 -1.83 8.10 -2.39 -0.02 -1.85 16 37 H 0.09 -1.25 8.14 -2.39 -0.02 -1.27 16 38 H 0.17 -0.72 7.45 -2.91 -0.02 -0.74 16 39 H 0.13 0.37 6.96 -2.39 -0.02 0.35 16 40 H 0.39 -3.45 7.48 -74.06 -0.55 -4.00 16 41 H -0.27 -0.96 7.11 99.48 0.71 -0.25 16 42 H -0.29 -1.64 7.11 99.48 0.71 -0.93 16 Total: 0.00 -28.59 371.04 -0.37 -28.96 By element: Atomic # 1 Polarization: -22.61 SS G_CDS: -0.13 Total: -22.74 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: 8.70 Total: 10.24 kcal Atomic # 7 Polarization: -2.21 SS G_CDS: -8.29 Total: -10.51 kcal Atomic # 8 Polarization: -4.14 SS G_CDS: -1.98 Total: -6.12 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: 2.00 Total: 0.96 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.67 Total: -0.80 kcal Total: -28.59 -0.37 -28.96 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.080 kcal (2) G-P(sol) polarization free energy of solvation -28.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.492 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.373 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.961 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds